RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CFAP54Q96N23 3096 aa1.83□□□□□ -2.12
NIPBL-204ENST00000504430 CRYBG3Q68DQ2 2970 aa1.83□□□□□ -2.12
NIPBL-204ENST00000504430 SPTBN5Q9NRC6 3674 aaKnown RBP1.81□□□□□ -2.12
NIPBL-204ENST00000504430 ZZEF1O43149 2961 aa1.81□□□□□ -2.12
NIPBL-204ENST00000504430 DMBT1Q9UGM3 2413 aaPredicted RBP1.81□□□□□ -2.12
NIPBL-204ENST00000504430 LAMA2P24043 3122 aaKnown RBP1.81□□□□□ -2.12
NIPBL-204ENST00000504430 ANK2Q01484 3957 aa1.81□□□□□ -2.12
NIPBL-204ENST00000504430 CHD8Q9HCK8 2581 aa1.81□□□□□ -2.12
NIPBL-204ENST00000504430 CD52P31358 61 aa1.81□□□□□ -2.12
NIPBL-204ENST00000504430 SPTBN4Q9H254 2564 aa1.8□□□□□ -2.12
NIPBL-204ENST00000504430 PDZD2O15018 2839 aa1.8□□□□□ -2.12
NIPBL-204ENST00000504430 RHPN1-AS1Q9BWJ2 59 aa1.8□□□□□ -2.12
NIPBL-204ENST00000504430 CFAP47Q6ZTR5 3102 aa1.79□□□□□ -2.12
NIPBL-204ENST00000504430 ASPMQ8IZT6 3477 aa1.79□□□□□ -2.12
NIPBL-204ENST00000504430 DCHS2Q6V1P9 2916 aa1.79□□□□□ -2.12
NIPBL-204ENST00000504430 CELSR3Q9NYQ7 3312 aa1.79□□□□□ -2.12
NIPBL-204ENST00000504430 SPG11Q96JI7 2443 aa1.78□□□□□ -2.12
NIPBL-204ENST00000504430 VWFP04275 2813 aa1.78□□□□□ -2.12
NIPBL-204ENST00000504430 DEFB136Q30KP8 78 aa1.78□□□□□ -2.13
NIPBL-204ENST00000504430 KALRNO60229 2985 aa1.78□□□□□ -2.13
NIPBL-204ENST00000504430 ZFHX4Q86UP3 3567 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 SONP18583 2426 aaKnown RBP1.77□□□□□ -2.13
NIPBL-204ENST00000504430 Q5VSD8 79 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 APCP25054 2843 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 DEFB131AP59861 70 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 CCDC168Q8NDH2 2452 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 COL12A1Q99715 3063 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 DCHS1Q96JQ0 3298 aa1.77□□□□□ -2.13
NIPBL-204ENST00000504430 FBN3Q75N90 2809 aa1.76□□□□□ -2.13
NIPBL-204ENST00000504430 VCANP13611 3396 aa1.76□□□□□ -2.13
NIPBL-204ENST00000504430 PTPN13Q12923 2485 aa1.76□□□□□ -2.13
NIPBL-204ENST00000504430 BRCA2P51587 3418 aa1.75□□□□□ -2.13
NIPBL-204ENST00000504430 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
NIPBL-204ENST00000504430 A0A096LNI7 61 aa1.75□□□□□ -2.13
NIPBL-204ENST00000504430 FRYQ5TBA9 3013 aa1.75□□□□□ -2.13
NIPBL-204ENST00000504430 ITPR1Q14643 2758 aa1.75□□□□□ -2.13
NIPBL-204ENST00000504430 UNC80Q8N2C7 3258 aa1.74□□□□□ -2.13
NIPBL-204ENST00000504430 DNAH12Q6ZR08 3092 aa1.74□□□□□ -2.13
NIPBL-204ENST00000504430 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
NIPBL-204ENST00000504430 LRBAP50851 2863 aa1.74□□□□□ -2.13
NIPBL-204ENST00000504430 ATMQ13315 3056 aa1.74□□□□□ -2.13
NIPBL-204ENST00000504430 DEFB109BQ30KR1 87 aa1.74□□□□□ -2.13
NIPBL-204ENST00000504430 WDFY3Q8IZQ1 3526 aa1.73□□□□□ -2.13
NIPBL-204ENST00000504430 LAMA1P25391 3075 aa1.73□□□□□ -2.13
NIPBL-204ENST00000504430 KRTAP5-9P26371 169 aa1.73□□□□□ -2.13
NIPBL-204ENST00000504430 DNAH6Q9C0G6 4158 aa1.73□□□□□ -2.13
NIPBL-204ENST00000504430 LCE3AQ5TA76 89 aa1.73□□□□□ -2.13
NIPBL-204ENST00000504430 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
NIPBL-204ENST00000504430 A0A096LPF7 62 aa1.72□□□□□ -2.13
NIPBL-204ENST00000504430 SPTAN1Q13813 2472 aaKnown RBP1.72□□□□□ -2.13
NIPBL-204ENST00000504430 DNAH14Q0VDD8 3507 aa1.72□□□□□ -2.13
NIPBL-204ENST00000504430 DMXL1Q9Y485 3027 aa1.72□□□□□ -2.13
NIPBL-204ENST00000504430 MUC3AQ02505 3323 aa1.72□□□□□ -2.13
NIPBL-204ENST00000504430 NF1P21359 2839 aa1.72□□□□□ -2.13
NIPBL-204ENST00000504430 NOP10Q9NPE3 64 aaKnown RBP1.72□□□□□ -2.13
NIPBL-204ENST00000504430 LOC400499M0QZD8 3231 aa1.72□□□□□ -2.13
NIPBL-204ENST00000504430 S4R3F8 94 aa1.71□□□□□ -2.14
NIPBL-204ENST00000504430 BOD1L1Q8NFC6 3051 aa1.71□□□□□ -2.14
NIPBL-204ENST00000504430 CDH23Q9H251 3354 aa1.69□□□□□ -2.14
NIPBL-204ENST00000504430 SETD2Q9BYW2 2564 aaPredicted RBP1.69□□□□□ -2.14
NIPBL-204ENST00000504430 DMDP11532 3685 aa1.69□□□□□ -2.14
NIPBL-204ENST00000504430 DEFB133Q30KQ1 61 aa1.69□□□□□ -2.14
NIPBL-204ENST00000504430 SPINK6Q6UWN8 80 aa1.68□□□□□ -2.14
NIPBL-204ENST00000504430 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
NIPBL-204ENST00000504430 MAST4O15021 2626 aa1.68□□□□□ -2.14
NIPBL-204ENST00000504430 DMXL2Q8TDJ6 3036 aa1.67□□□□□ -2.14
NIPBL-204ENST00000504430 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
NIPBL-204ENST00000504430 H3BUA1 57 aa1.67□□□□□ -2.14
NIPBL-204ENST00000504430 BSNQ9UPA5 3926 aa1.67□□□□□ -2.14
NIPBL-204ENST00000504430 EPG5Q9HCE0 2579 aa1.67□□□□□ -2.14
NIPBL-204ENST00000504430 LRRK2Q5S007 2527 aa1.66□□□□□ -2.14
NIPBL-204ENST00000504430 LAMA5O15230 3695 aa1.66□□□□□ -2.14
NIPBL-204ENST00000504430 CSMD1Q96PZ7 3565 aa1.66□□□□□ -2.14
NIPBL-204ENST00000504430 NBEAL2Q6ZNJ1 2754 aa1.65□□□□□ -2.14
NIPBL-204ENST00000504430 HIVEP3Q5T1R4 2406 aa1.65□□□□□ -2.14
NIPBL-204ENST00000504430 ZFYVE26Q68DK2 2539 aa1.64□□□□□ -2.15
NIPBL-204ENST00000504430 TENM4Q6N022 2769 aa1.64□□□□□ -2.15
NIPBL-204ENST00000504430 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
NIPBL-204ENST00000504430 NOTCH2Q04721 2471 aa1.64□□□□□ -2.15
NIPBL-204ENST00000504430 TENM2Q9NT68 2774 aa1.64□□□□□ -2.15
NIPBL-204ENST00000504430 ANKHD1Q8IWZ3 2542 aaKnown RBP1.64□□□□□ -2.15
NIPBL-204ENST00000504430 MAP1AP78559 2803 aaPredicted RBP1.64□□□□□ -2.15
NIPBL-204ENST00000504430 DNAH3Q8TD57 4116 aa1.63□□□□□ -2.15
NIPBL-204ENST00000504430 TLN1Q9Y490 2541 aaKnown RBP1.63□□□□□ -2.15
NIPBL-204ENST00000504430 Q9Y3F1 56 aa1.63□□□□□ -2.15
NIPBL-204ENST00000504430 SETXQ7Z333 2677 aaKnown RBP1.63□□□□□ -2.15
NIPBL-204ENST00000504430 GCN1Q92616 2671 aaKnown RBP1.63□□□□□ -2.15
NIPBL-204ENST00000504430 USP9XQ93008 2570 aaPredicted RBP1.62□□□□□ -2.15
NIPBL-204ENST00000504430 FLNCQ14315 2725 aa1.62□□□□□ -2.15
NIPBL-204ENST00000504430 UTP20O75691 2785 aaKnown RBP1.62□□□□□ -2.15
NIPBL-204ENST00000504430 PKD1L1Q8TDX9 2849 aa1.61□□□□□ -2.15
NIPBL-204ENST00000504430 DOPEY1Q5JWR5 2465 aa1.61□□□□□ -2.15
NIPBL-204ENST00000504430 USP24Q9UPU5 2620 aa1.61□□□□□ -2.15
NIPBL-204ENST00000504430 CUBNO60494 3623 aa1.6□□□□□ -2.15
NIPBL-204ENST00000504430 TACC2O95359 2948 aa1.6□□□□□ -2.15
NIPBL-204ENST00000504430 COL6A5A8TX70 2615 aa1.6□□□□□ -2.15
NIPBL-204ENST00000504430 ADGRG4Q8IZF6 3080 aa1.59□□□□□ -2.15
NIPBL-204ENST00000504430 NCOR2Q9Y618 2525 aa1.59□□□□□ -2.15
NIPBL-204ENST00000504430 ACANP16112 2415 aa1.59□□□□□ -2.16
NIPBL-204ENST00000504430 MYO15AQ9UKN7 3530 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms