RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LINC00846Q9NV44 126 aa7.57□□□□□ -1.2
PDLIM7-211ENST00000504318 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
PDLIM7-211ENST00000504318 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
PDLIM7-211ENST00000504318 SCGB1A1P11684 91 aa7.53□□□□□ -1.2
PDLIM7-211ENST00000504318 PCOTHQ58A44 107 aa7.53□□□□□ -1.2
PDLIM7-211ENST00000504318 IMUPQ9GZP8 106 aa7.53□□□□□ -1.2
PDLIM7-211ENST00000504318 TRBV7-7A0A0K0K1E9 115 aa7.52□□□□□ -1.21
PDLIM7-211ENST00000504318 Q6Q795 121 aa7.52□□□□□ -1.21
PDLIM7-211ENST00000504318 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
PDLIM7-211ENST00000504318 A0A1W2PNM2 257 aa7.5□□□□□ -1.21
PDLIM7-211ENST00000504318 Q6ZVQ6 151 aa7.5□□□□□ -1.21
PDLIM7-211ENST00000504318 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
PDLIM7-211ENST00000504318 CXCL6P80162 114 aa7.47□□□□□ -1.21
PDLIM7-211ENST00000504318 MT1HP80294 61 aa7.47□□□□□ -1.21
PDLIM7-211ENST00000504318 NREPQ16612 68 aa7.47□□□□□ -1.21
PDLIM7-211ENST00000504318 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
PDLIM7-211ENST00000504318 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
PDLIM7-211ENST00000504318 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
PDLIM7-211ENST00000504318 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
PDLIM7-211ENST00000504318 BPY2O14599 106 aa7.41□□□□□ -1.22
PDLIM7-211ENST00000504318 A0A087WSZ3 146 aa7.39□□□□□ -1.23
PDLIM7-211ENST00000504318 HIST1H4AP62805 103 aaKnown RBP7.39□□□□□ -1.23
PDLIM7-211ENST00000504318 SS18L2Q9UHA2 77 aa7.39□□□□□ -1.23
PDLIM7-211ENST00000504318 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
PDLIM7-211ENST00000504318 FAM236AA0A1B0GUQ0 79 aa7.35□□□□□ -1.23
PDLIM7-211ENST00000504318 FAM236BA0A1B0GV22 79 aa7.35□□□□□ -1.23
PDLIM7-211ENST00000504318 J3KT08 172 aa7.34□□□□□ -1.23
PDLIM7-211ENST00000504318 PCP4P48539 62 aa7.34□□□□□ -1.23
PDLIM7-211ENST00000504318 KRTAP10-6P60371 365 aaPredicted RBP7.33□□□□□ -1.24
PDLIM7-211ENST00000504318 Q75L30 129 aa7.33□□□□□ -1.24
PDLIM7-211ENST00000504318 Q96NJ1 140 aa7.33□□□□□ -1.24
PDLIM7-211ENST00000504318 ATOX1O00244 68 aa7.31□□□□□ -1.24
PDLIM7-211ENST00000504318 A0A087WVE0 104 aa7.3□□□□□ -1.24
PDLIM7-211ENST00000504318 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
PDLIM7-211ENST00000504318 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
PDLIM7-211ENST00000504318 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
PDLIM7-211ENST00000504318 DSCR10P59022 87 aa7.27□□□□□ -1.25
PDLIM7-211ENST00000504318 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
PDLIM7-211ENST00000504318 A8MWP4 228 aa7.26□□□□□ -1.25
PDLIM7-211ENST00000504318 A8MUU9 505 aa7.25□□□□□ -1.25
PDLIM7-211ENST00000504318 NDUFB1O75438 58 aa7.25□□□□□ -1.25
PDLIM7-211ENST00000504318 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
PDLIM7-211ENST00000504318 Q8N9L7 120 aa7.25□□□□□ -1.25
PDLIM7-211ENST00000504318 K7EQZ3 153 aa7.23□□□□□ -1.25
PDLIM7-211ENST00000504318 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
PDLIM7-211ENST00000504318 PRR15Q8IV56 129 aa7.22□□□□□ -1.25
PDLIM7-211ENST00000504318 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
PDLIM7-211ENST00000504318 ATP11AUNQ6ZP68 121 aa7.21□□□□□ -1.26
PDLIM7-211ENST00000504318 HCG22E2RYF7 251 aa7.2□□□□□ -1.26
PDLIM7-211ENST00000504318 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
PDLIM7-211ENST00000504318 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
PDLIM7-211ENST00000504318 SERP2Q8N6R1 65 aa7.19□□□□□ -1.26
PDLIM7-211ENST00000504318 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
PDLIM7-211ENST00000504318 TRAV7A0A075B6U4 112 aa7.17□□□□□ -1.26
PDLIM7-211ENST00000504318 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
PDLIM7-211ENST00000504318 UQCRQO14949 82 aa7.16□□□□□ -1.26
PDLIM7-211ENST00000504318 COX7CP15954 63 aa7.15□□□□□ -1.26
PDLIM7-211ENST00000504318 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
PDLIM7-211ENST00000504318 M0R2T5 61 aa7.14□□□□□ -1.27
PDLIM7-211ENST00000504318 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
PDLIM7-211ENST00000504318 C8orf87E5RJ46 101 aa7.12□□□□□ -1.27
PDLIM7-211ENST00000504318 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
PDLIM7-211ENST00000504318 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
PDLIM7-211ENST00000504318 WFDC13Q8IUB5 93 aa7.11□□□□□ -1.27
PDLIM7-211ENST00000504318 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
PDLIM7-211ENST00000504318 hDV103S1A0JD37 113 aa7.1□□□□□ -1.27
PDLIM7-211ENST00000504318 OCR1Q9BZK8 76 aa7.1□□□□□ -1.27
PDLIM7-211ENST00000504318 MPLKIPQ8TAP9 179 aa7.09□□□□□ -1.27
PDLIM7-211ENST00000504318 KRTAP9-8Q9BYQ0 159 aa7.09□□□□□ -1.27
PDLIM7-211ENST00000504318 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
PDLIM7-211ENST00000504318 LINC00313P59037 77 aa7.08□□□□□ -1.28
PDLIM7-211ENST00000504318 TMEM254Q8TBM7 123 aa7.07□□□□□ -1.28
PDLIM7-211ENST00000504318 HRES1P13985 223 aa7.05□□□□□ -1.28
PDLIM7-211ENST00000504318 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
PDLIM7-211ENST00000504318 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
PDLIM7-211ENST00000504318 MRPL34Q9BQ48 92 aaKnown RBP7.03□□□□□ -1.28
PDLIM7-211ENST00000504318 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
PDLIM7-211ENST00000504318 MP68P56378 58 aa7□□□□□ -1.29
PDLIM7-211ENST00000504318 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
PDLIM7-211ENST00000504318 H3BPC8 53 aa6.98□□□□□ -1.29
PDLIM7-211ENST00000504318 NDUFC1O43677 76 aa6.98□□□□□ -1.29
PDLIM7-211ENST00000504318 NDUFS5O43920 106 aa6.98□□□□□ -1.29
PDLIM7-211ENST00000504318 TRAV22A0A0B4J277 110 aa6.95□□□□□ -1.3
PDLIM7-211ENST00000504318 MT2AP02795 61 aa6.95□□□□□ -1.3
PDLIM7-211ENST00000504318 USH2AO75445 5202 aa6.95□□□□□ -1.3
PDLIM7-211ENST00000504318 H0Y9P7 68 aa6.94□□□□□ -1.3
PDLIM7-211ENST00000504318 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
PDLIM7-211ENST00000504318 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
PDLIM7-211ENST00000504318 MT1FP04733 61 aa6.91□□□□□ -1.3
PDLIM7-211ENST00000504318 TMEM258P61165 79 aa6.91□□□□□ -1.3
PDLIM7-211ENST00000504318 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
PDLIM7-211ENST00000504318 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
PDLIM7-211ENST00000504318 H7BZZ5 65 aa6.88□□□□□ -1.31
PDLIM7-211ENST00000504318 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
PDLIM7-211ENST00000504318 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
PDLIM7-211ENST00000504318 CYSTM1Q9H1C7 97 aa6.88□□□□□ -1.31
PDLIM7-211ENST00000504318 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
PDLIM7-211ENST00000504318 C1orf64Q8NEQ6 169 aa6.87□□□□□ -1.31
PDLIM7-211ENST00000504318 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
PDLIM7-211ENST00000504318 LCE2BO14633 110 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms