RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
SUB1-204ENST00000504016 SRRM2Q9UQ35 2752 aaKnown RBP0.05□□□□□ -2.4
SUB1-204ENST00000504016 H0YGX0 51 aa0.05□□□□□ -2.4
SUB1-204ENST00000504016 RPS27P42677 84 aaKnown RBP0.05□□□□□ -2.4
SUB1-204ENST00000504016 RPS27LQ71UM5 84 aaKnown RBP0.05□□□□□ -2.4
SUB1-204ENST00000504016 MADDQ8WXG6 1647 aa0.05□□□□□ -2.4
SUB1-204ENST00000504016 CCDC180Q9P1Z9 1646 aa0.05□□□□□ -2.4
SUB1-204ENST00000504016 ABCA10Q8WWZ4 1543 aa0.04□□□□□ -2.4
SUB1-204ENST00000504016 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
SUB1-204ENST00000504016 ABCA6Q8N139 1617 aa0.03□□□□□ -2.4
SUB1-204ENST00000504016 KALRNO60229 2985 aa0.03□□□□□ -2.4
SUB1-204ENST00000504016 PKHD1P08F94 4074 aa0.03□□□□□ -2.4
SUB1-204ENST00000504016 AKAP9Q99996 3911 aa0.03□□□□□ -2.41
SUB1-204ENST00000504016 ANKHD1Q8IWZ3 2542 aaKnown RBP0.03□□□□□ -2.41
SUB1-204ENST00000504016 CLASP1Q7Z460 1538 aa0.03□□□□□ -2.41
SUB1-204ENST00000504016 TEP1Q99973 2627 aaKnown RBP0.02□□□□□ -2.41
SUB1-204ENST00000504016 FAM186AA6NE01 2351 aa0.02□□□□□ -2.41
SUB1-204ENST00000504016 IGIPA6NJ69 53 aa0.02□□□□□ -2.41
SUB1-204ENST00000504016 EEA1Q15075 1411 aa0.02□□□□□ -2.41
SUB1-204ENST00000504016 PKD1P98161 4303 aa0.02□□□□□ -2.41
SUB1-204ENST00000504016 CPS1P31327 1500 aa0.02□□□□□ -2.41
SUB1-204ENST00000504016 ACACAQ13085 2346 aa0.02□□□□□ -2.41
SUB1-204ENST00000504016 FLGP20930 4061 aaPredicted RBP0.02□□□□□ -2.41
SUB1-204ENST00000504016 RIF1Q5UIP0 2472 aaKnown RBP0.01□□□□□ -2.41
SUB1-204ENST00000504016 IGLV5-48A0A075B6I7 105 aa0.01□□□□□ -2.41
SUB1-204ENST00000504016 MMP24-AS1A0A0U1RRL7 71 aa0.01□□□□□ -2.41
SUB1-204ENST00000504016 TIAM1Q13009 1591 aa0.01□□□□□ -2.41
SUB1-204ENST00000504016 NBPF19A0A087WUL8 3843 aa0□□□□□ -2.41
SUB1-204ENST00000504016 SMIM27A0A1W2PRY6 76 aa0□□□□□ -2.41
SUB1-204ENST00000504016 SPRR2EP22531 72 aa0□□□□□ -2.41
SUB1-204ENST00000504016 PLNP26678 52 aa0□□□□□ -2.41
SUB1-204ENST00000504016 KIF1AQ12756 1690 aa0□□□□□ -2.41
SUB1-204ENST00000504016 NBEAL2Q6ZNJ1 2754 aa0□□□□□ -2.41
SUB1-204ENST00000504016 LINC00308Q8TCZ7 52 aa0□□□□□ -2.41
SUB1-204ENST00000504016 MGAM2Q2M2H8 2515 aa-0.01□□□□□ -2.41
SUB1-204ENST00000504016 ITSN2Q9NZM3 1697 aa-0.01□□□□□ -2.41
SUB1-204ENST00000504016 WDR87Q6ZQQ6 2873 aa-0.01□□□□□ -2.41
SUB1-204ENST00000504016 MT1AP04731 61 aa-0.01□□□□□ -2.41
SUB1-204ENST00000504016 KRTAP6-2Q3LI66 62 aa-0.01□□□□□ -2.41
SUB1-204ENST00000504016 PRXQ9BXM0 1461 aa-0.02□□□□□ -2.41
SUB1-204ENST00000504016 SVEP1Q4LDE5 3571 aa-0.02□□□□□ -2.41
SUB1-204ENST00000504016 GLI2P10070 1586 aa-0.02□□□□□ -2.41
SUB1-204ENST00000504016 MYO18BQ8IUG5 2567 aa-0.02□□□□□ -2.41
SUB1-204ENST00000504016 VPS13BQ7Z7G8 4022 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 LRP1BQ9NZR2 4599 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 ITPR3Q14573 2671 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 LY75O60449 1722 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 TOGARAM1Q9Y4F4 1720 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 TNP1P09430 55 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 DEFB110Q30KQ9 67 aa-0.03□□□□□ -2.41
SUB1-204ENST00000504016 DNAH3Q8TD57 4116 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 ALS2Q96Q42 1657 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 A8MTW9 85 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 CMC2Q9NRP2 79 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 UGGT1Q9NYU2 1555 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 MAST1Q9Y2H9 1570 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 CUBNO60494 3623 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 DNAH9Q9NYC9 4486 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 ANKRD36CQ5JPF3 1778 aa-0.04□□□□□ -2.42
SUB1-204ENST00000504016 CCDC168Q8NDH2 2452 aa-0.05□□□□□ -2.42
SUB1-204ENST00000504016 LAMA5O15230 3695 aa-0.05□□□□□ -2.42
SUB1-204ENST00000504016 LAMA1P25391 3075 aa-0.05□□□□□ -2.42
SUB1-204ENST00000504016 M0QY20 66 aa-0.05□□□□□ -2.42
SUB1-204ENST00000504016 M0QZ58 72 aa-0.06□□□□□ -2.42
SUB1-204ENST00000504016 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
SUB1-204ENST00000504016 CROCC2H7BZ55 1655 aa-0.06□□□□□ -2.42
SUB1-204ENST00000504016 ADCY10Q96PN6 1610 aa-0.06□□□□□ -2.42
SUB1-204ENST00000504016 CDC42BPAQ5VT25 1732 aa-0.07□□□□□ -2.42
SUB1-204ENST00000504016 ACACBO00763 2458 aa-0.07□□□□□ -2.42
SUB1-204ENST00000504016 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
SUB1-204ENST00000504016 USP9XQ93008 2570 aaPredicted RBP-0.07□□□□□ -2.42
SUB1-204ENST00000504016 KAAG1Q9UBP8 84 aa-0.07□□□□□ -2.42
SUB1-204ENST00000504016 DNAH6Q9C0G6 4158 aa-0.08□□□□□ -2.42
SUB1-204ENST00000504016 ITPR1Q14643 2758 aa-0.08□□□□□ -2.42
SUB1-204ENST00000504016 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
SUB1-204ENST00000504016 A0A0C4DFX4 3053 aa-0.08□□□□□ -2.42
SUB1-204ENST00000504016 DEFB131AP59861 70 aa-0.09□□□□□ -2.42
SUB1-204ENST00000504016 CLPSL2Q6UWE3 100 aa-0.09□□□□□ -2.42
SUB1-204ENST00000504016 WFDC10BQ8IUB3 73 aa-0.09□□□□□ -2.42
SUB1-204ENST00000504016 FRYQ5TBA9 3013 aa-0.09□□□□□ -2.42
SUB1-204ENST00000504016 TLN2Q9Y4G6 2542 aa-0.1□□□□□ -2.42
SUB1-204ENST00000504016 USP9YO00507 2555 aaPredicted RBP-0.1□□□□□ -2.43
SUB1-204ENST00000504016 COL12A1Q99715 3063 aa-0.1□□□□□ -2.43
SUB1-204ENST00000504016 EFCAB6Q5THR3 1501 aa-0.1□□□□□ -2.43
SUB1-204ENST00000504016 FAT3Q8TDW7 4589 aa-0.1□□□□□ -2.43
SUB1-204ENST00000504016 SYCP2Q9BX26 1530 aa-0.1□□□□□ -2.43
SUB1-204ENST00000504016 SNRPGP15A8MWD9 76 aa-0.11□□□□□ -2.43
SUB1-204ENST00000504016 SMIM2Q9BVW6 85 aa-0.11□□□□□ -2.43
SUB1-204ENST00000504016 DNAH1Q9P2D7 4330 aa-0.11□□□□□ -2.43
SUB1-204ENST00000504016 PCLOQ9Y6V0 5065 aa-0.12□□□□□ -2.43
SUB1-204ENST00000504016 RANBP2P49792 3224 aaKnown RBP-0.12□□□□□ -2.43
SUB1-204ENST00000504016 ANK3Q12955 4377 aaKnown RBP-0.12□□□□□ -2.43
SUB1-204ENST00000504016 SACSQ9NZJ4 4579 aa-0.12□□□□□ -2.43
SUB1-204ENST00000504016 AGLP35573 1532 aa-0.13□□□□□ -2.43
SUB1-204ENST00000504016 ABCA5Q8WWZ7 1642 aa-0.13□□□□□ -2.43
SUB1-204ENST00000504016 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
SUB1-204ENST00000504016 VPS13DQ5THJ4 4388 aa-0.13□□□□□ -2.43
SUB1-204ENST00000504016 ABCC8Q09428 1581 aa-0.13□□□□□ -2.43
SUB1-204ENST00000504016 PKHD1L1Q86WI1 4243 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms