RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LINC00472Q9H8W2 130 aa8.97□□□□□ -0.97
SCLT1-205ENST00000503401 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
SCLT1-205ENST00000503401 LCE2BO14633 110 aa8.93□□□□□ -0.98
SCLT1-205ENST00000503401 FAM240AA0A1B0GVK7 77 aa8.91□□□□□ -0.98
SCLT1-205ENST00000503401 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
SCLT1-205ENST00000503401 A0A1B0GW54 56 aa8.89□□□□□ -0.99
SCLT1-205ENST00000503401 DSCR10P59022 87 aa8.89□□□□□ -0.99
SCLT1-205ENST00000503401 PCOTHQ58A44 107 aa8.87□□□□□ -0.99
SCLT1-205ENST00000503401 ACYP1P07311 99 aa8.86□□□□□ -0.99
SCLT1-205ENST00000503401 RPL37P61927 97 aaKnown RBP8.86□□□□□ -0.99
SCLT1-205ENST00000503401 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
SCLT1-205ENST00000503401 KRTAP4-1Q9BYQ7 146 aa8.85□□□□□ -0.99
SCLT1-205ENST00000503401 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
SCLT1-205ENST00000503401 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
SCLT1-205ENST00000503401 NREPQ16612 68 aa8.83□□□□□ -1
SCLT1-205ENST00000503401 J3KT08 172 aa8.82□□□□□ -1
SCLT1-205ENST00000503401 LINC00313P59037 77 aa8.82□□□□□ -1
SCLT1-205ENST00000503401 A0A1B0GVX0 72 aa8.8□□□□□ -1
SCLT1-205ENST00000503401 Q75L30 129 aa8.8□□□□□ -1
SCLT1-205ENST00000503401 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
SCLT1-205ENST00000503401 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
SCLT1-205ENST00000503401 A8MWP4 228 aa8.76□□□□□ -1.01
SCLT1-205ENST00000503401 ANAPC13Q9BS18 74 aa8.76□□□□□ -1.01
SCLT1-205ENST00000503401 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
SCLT1-205ENST00000503401 A8MUU9 505 aa8.76□□□□□ -1.01
SCLT1-205ENST00000503401 NDUFB1O75438 58 aa8.76□□□□□ -1.01
SCLT1-205ENST00000503401 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
SCLT1-205ENST00000503401 Q6ZVQ6 151 aa8.75□□□□□ -1.01
SCLT1-205ENST00000503401 C8orf87E5RJ46 101 aa8.73□□□□□ -1.01
SCLT1-205ENST00000503401 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
SCLT1-205ENST00000503401 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
SCLT1-205ENST00000503401 MT-ATP8P03928 68 aa8.72□□□□□ -1.01
SCLT1-205ENST00000503401 BPY2O14599 106 aa8.7□□□□□ -1.02
SCLT1-205ENST00000503401 LINC00643Q86TS7 51 aa8.7□□□□□ -1.02
SCLT1-205ENST00000503401 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
SCLT1-205ENST00000503401 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
SCLT1-205ENST00000503401 K7EQZ3 153 aa8.69□□□□□ -1.02
SCLT1-205ENST00000503401 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
SCLT1-205ENST00000503401 Q8N9L7 120 aa8.65□□□□□ -1.02
SCLT1-205ENST00000503401 CXCL6P80162 114 aa8.64□□□□□ -1.03
SCLT1-205ENST00000503401 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
SCLT1-205ENST00000503401 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
SCLT1-205ENST00000503401 IMUPQ9GZP8 106 aa8.61□□□□□ -1.03
SCLT1-205ENST00000503401 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
SCLT1-205ENST00000503401 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
SCLT1-205ENST00000503401 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
SCLT1-205ENST00000503401 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
SCLT1-205ENST00000503401 MRPL34Q9BQ48 92 aaKnown RBP8.56□□□□□ -1.04
SCLT1-205ENST00000503401 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
SCLT1-205ENST00000503401 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
SCLT1-205ENST00000503401 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
SCLT1-205ENST00000503401 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
SCLT1-205ENST00000503401 NDUFS5O43920 106 aa8.51□□□□□ -1.05
SCLT1-205ENST00000503401 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
SCLT1-205ENST00000503401 CCDC179H3BU77 68 aa8.5□□□□□ -1.05
SCLT1-205ENST00000503401 SMIM20Q8N5G0 67 aa8.47□□□□□ -1.05
SCLT1-205ENST00000503401 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
SCLT1-205ENST00000503401 A0A087WVE0 104 aa8.46□□□□□ -1.06
SCLT1-205ENST00000503401 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
SCLT1-205ENST00000503401 HIST1H4AP62805 103 aaKnown RBP8.45□□□□□ -1.06
SCLT1-205ENST00000503401 UQCRQO14949 82 aa8.44□□□□□ -1.06
SCLT1-205ENST00000503401 FLGP20930 4061 aaPredicted RBP8.43□□□□□ -1.06
SCLT1-205ENST00000503401 SPINK7P58062 85 aa8.41□□□□□ -1.06
SCLT1-205ENST00000503401 HRES1P13985 223 aa8.4□□□□□ -1.06
SCLT1-205ENST00000503401 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
SCLT1-205ENST00000503401 MT1HP80294 61 aa8.4□□□□□ -1.06
SCLT1-205ENST00000503401 Q5W150 140 aa8.4□□□□□ -1.07
SCLT1-205ENST00000503401 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
SCLT1-205ENST00000503401 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
SCLT1-205ENST00000503401 ATOX1O00244 68 aa8.36□□□□□ -1.07
SCLT1-205ENST00000503401 COX7CP15954 63 aa8.34□□□□□ -1.07
SCLT1-205ENST00000503401 C5orf47Q569G3 176 aa8.34□□□□□ -1.07
SCLT1-205ENST00000503401 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.07
SCLT1-205ENST00000503401 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
SCLT1-205ENST00000503401 FAM236DA0A1B0GTK5 79 aa8.32□□□□□ -1.08
SCLT1-205ENST00000503401 FAM236CP0DP71 79 aa8.32□□□□□ -1.08
SCLT1-205ENST00000503401 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
SCLT1-205ENST00000503401 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
SCLT1-205ENST00000503401 TMEM258P61165 79 aa8.29□□□□□ -1.08
SCLT1-205ENST00000503401 M0R2T5 61 aa8.28□□□□□ -1.08
SCLT1-205ENST00000503401 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
SCLT1-205ENST00000503401 C7orf65Q6ZTY9 151 aa8.25□□□□□ -1.09
SCLT1-205ENST00000503401 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
SCLT1-205ENST00000503401 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
SCLT1-205ENST00000503401 SERP2Q8N6R1 65 aa8.23□□□□□ -1.09
SCLT1-205ENST00000503401 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
SCLT1-205ENST00000503401 TRAV7A0A075B6U4 112 aa8.17□□□□□ -1.1
SCLT1-205ENST00000503401 LOC100996750A0A140TA64 210 aa8.17□□□□□ -1.1
SCLT1-205ENST00000503401 KRTAP4-6Q9BYQ5 205 aa8.17□□□□□ -1.1
SCLT1-205ENST00000503401 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
SCLT1-205ENST00000503401 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
SCLT1-205ENST00000503401 H0Y9P7 68 aa8.08□□□□□ -1.12
SCLT1-205ENST00000503401 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
SCLT1-205ENST00000503401 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
SCLT1-205ENST00000503401 LOC101927531A0A1B0GV80 90 aa8.04□□□□□ -1.12
SCLT1-205ENST00000503401 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
SCLT1-205ENST00000503401 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
SCLT1-205ENST00000503401 H3BPC8 53 aa8.02□□□□□ -1.13
SCLT1-205ENST00000503401 NDUFC1O43677 76 aa8.01□□□□□ -1.13
SCLT1-205ENST00000503401 MP68P56378 58 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms