RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 H7BZZ5 65 aa10.96□□□□□ -0.66
ARHGEF28-205ENST00000503341 C5orf47Q569G3 176 aa10.96□□□□□ -0.66
ARHGEF28-205ENST00000503341 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.66
ARHGEF28-205ENST00000503341 C1orf195Q5TG92 126 aa10.96□□□□□ -0.66
ARHGEF28-205ENST00000503341 LIMD2Q9BT23 127 aa10.96□□□□□ -0.66
ARHGEF28-205ENST00000503341 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
ARHGEF28-205ENST00000503341 FAT1Q14517 4588 aa10.95□□□□□ -0.66
ARHGEF28-205ENST00000503341 RYR3Q15413 4870 aa10.95□□□□□ -0.66
ARHGEF28-205ENST00000503341 SPINK1P00995 79 aa10.93□□□□□ -0.66
ARHGEF28-205ENST00000503341 NDUFC1O43677 76 aa10.92□□□□□ -0.66
ARHGEF28-205ENST00000503341 LINC00304Q8N9R0 145 aa10.89□□□□□ -0.67
ARHGEF28-205ENST00000503341 MRPL34Q9BQ48 92 aaKnown RBP10.88□□□□□ -0.67
ARHGEF28-205ENST00000503341 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
ARHGEF28-205ENST00000503341 ZCCHC13Q8WW36 166 aaKnown RBP10.88□□□□□ -0.67
ARHGEF28-205ENST00000503341 SPAG11AQ6PDA7 123 aa10.86□□□□□ -0.67
ARHGEF28-205ENST00000503341 C8orf87E5RJ46 101 aa10.86□□□□□ -0.67
ARHGEF28-205ENST00000503341 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
ARHGEF28-205ENST00000503341 MP68P56378 58 aa10.85□□□□□ -0.67
ARHGEF28-205ENST00000503341 TP53AIP1Q9HCN2 124 aa10.84□□□□□ -0.67
ARHGEF28-205ENST00000503341 H0Y9P7 68 aa10.83□□□□□ -0.68
ARHGEF28-205ENST00000503341 NDUFS5O43920 106 aa10.81□□□□□ -0.68
ARHGEF28-205ENST00000503341 FAM236DA0A1B0GTK5 79 aa10.8□□□□□ -0.68
ARHGEF28-205ENST00000503341 FAM236CP0DP71 79 aa10.8□□□□□ -0.68
ARHGEF28-205ENST00000503341 LINC00313P59037 77 aa10.8□□□□□ -0.68
ARHGEF28-205ENST00000503341 TRAV22A0A0B4J277 110 aa10.8□□□□□ -0.68
ARHGEF28-205ENST00000503341 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
ARHGEF28-205ENST00000503341 H3BPC8 53 aa10.79□□□□□ -0.68
ARHGEF28-205ENST00000503341 Q5VSD8 79 aa10.79□□□□□ -0.68
ARHGEF28-205ENST00000503341 HSPG2P98160 4391 aa10.73□□□□□ -0.69
ARHGEF28-205ENST00000503341 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
ARHGEF28-205ENST00000503341 RPS28P62857 69 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-205ENST00000503341 RYR1P21817 5038 aa10.71□□□□□ -0.69
ARHGEF28-205ENST00000503341 KRTAP16-1A8MUX0 517 aa10.71□□□□□ -0.69
ARHGEF28-205ENST00000503341 KRTAP17-1Q9BYP8 105 aa10.71□□□□□ -0.69
ARHGEF28-205ENST00000503341 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
ARHGEF28-205ENST00000503341 ATP5EP56381 51 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF28-205ENST00000503341 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF28-205ENST00000503341 Q5W150 140 aa10.66□□□□□ -0.7
ARHGEF28-205ENST00000503341 KRTAP13-3Q3SY46 172 aa10.65□□□□□ -0.7
ARHGEF28-205ENST00000503341 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
ARHGEF28-205ENST00000503341 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
ARHGEF28-205ENST00000503341 Q8N1X5 172 aa10.62□□□□□ -0.71
ARHGEF28-205ENST00000503341 OXTP01178 125 aa10.61□□□□□ -0.71
ARHGEF28-205ENST00000503341 KIAA1109Q2LD37 5005 aa10.59□□□□□ -0.71
ARHGEF28-205ENST00000503341 SPANXA2-OT1Q8N9U9 137 aa10.56□□□□□ -0.72
ARHGEF28-205ENST00000503341 RETNLBQ9BQ08 111 aa10.56□□□□□ -0.72
ARHGEF28-205ENST00000503341 EPPK1P58107 5090 aaKnown RBP10.55□□□□□ -0.72
ARHGEF28-205ENST00000503341 LOC101927531A0A1B0GV80 90 aa10.55□□□□□ -0.72
ARHGEF28-205ENST00000503341 CYP4F30PQ9H0H9 118 aa10.54□□□□□ -0.72
ARHGEF28-205ENST00000503341 PRR4Q16378 134 aa10.54□□□□□ -0.72
ARHGEF28-205ENST00000503341 PCOTHQ58A44 107 aa10.54□□□□□ -0.72
ARHGEF28-205ENST00000503341 LRP1Q07954 4544 aaKnown RBP10.52□□□□□ -0.73
ARHGEF28-205ENST00000503341 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
ARHGEF28-205ENST00000503341 IGLV7-46A0A075B6I9 117 aa10.48□□□□□ -0.73
ARHGEF28-205ENST00000503341 C9orf92A6NGG3 77 aa10.48□□□□□ -0.73
ARHGEF28-205ENST00000503341 TNXBP22105 4242 aa10.48□□□□□ -0.73
ARHGEF28-205ENST00000503341 IGKV2-30P06310 120 aa10.44□□□□□ -0.74
ARHGEF28-205ENST00000503341 MT1HL1P0DM35 61 aa10.44□□□□□ -0.74
ARHGEF28-205ENST00000503341 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
ARHGEF28-205ENST00000503341 C20orf166-AS1Q96NR2 134 aa10.42□□□□□ -0.74
ARHGEF28-205ENST00000503341 A8MUU9 505 aa10.41□□□□□ -0.74
ARHGEF28-205ENST00000503341 SMIM26A0A096LP01 95 aa10.39□□□□□ -0.75
ARHGEF28-205ENST00000503341 FP248Q71RG6 208 aaPredicted RBP10.37□□□□□ -0.75
ARHGEF28-205ENST00000503341 IGKV2D-30A0A075B6S6 120 aa10.33□□□□□ -0.76
ARHGEF28-205ENST00000503341 HRES1P13985 223 aa10.33□□□□□ -0.76
ARHGEF28-205ENST00000503341 KRTAP4-5Q9BYR2 181 aa10.33□□□□□ -0.76
ARHGEF28-205ENST00000503341 DMBT1Q9UGM3 2413 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF28-205ENST00000503341 Q75L30 129 aa10.28□□□□□ -0.76
ARHGEF28-205ENST00000503341 COA5Q86WW8 74 aa10.27□□□□□ -0.77
ARHGEF28-205ENST00000503341 MYCBP2O75592 4640 aa10.26□□□□□ -0.77
ARHGEF28-205ENST00000503341 C7orf65Q6ZTY9 151 aa10.25□□□□□ -0.77
ARHGEF28-205ENST00000503341 DMAC1Q96GE9 116 aa10.21□□□□□ -0.77
ARHGEF28-205ENST00000503341 C4orf26Q17RF5 130 aa10.2□□□□□ -0.78
ARHGEF28-205ENST00000503341 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
ARHGEF28-205ENST00000503341 ACYP2P14621 99 aa10.17□□□□□ -0.78
ARHGEF28-205ENST00000503341 XP32Q5T750 250 aa10.16□□□□□ -0.78
ARHGEF28-205ENST00000503341 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
ARHGEF28-205ENST00000503341 Q1T7F1 81 aa10.13□□□□□ -0.79
ARHGEF28-205ENST00000503341 SPINK7P58062 85 aa10.12□□□□□ -0.79
ARHGEF28-205ENST00000503341 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
ARHGEF28-205ENST00000503341 BIRC6Q9NR09 4857 aa10.08□□□□□ -0.8
ARHGEF28-205ENST00000503341 TPRXLQ17RH7 258 aa10.04□□□□□ -0.8
ARHGEF28-205ENST00000503341 V9GYY9 64 aa10.04□□□□□ -0.8
ARHGEF28-205ENST00000503341 ABCA13Q86UQ4 5058 aa10.02□□□□□ -0.81
ARHGEF28-205ENST00000503341 CHKB-CPT1BH3BT56 60 aa10.01□□□□□ -0.81
ARHGEF28-205ENST00000503341 HERC2O95714 4834 aa10.01□□□□□ -0.81
ARHGEF28-205ENST00000503341 A8MUN3 132 aa10.01□□□□□ -0.81
ARHGEF28-205ENST00000503341 PRO0628Q9UI54 55 aa10□□□□□ -0.81
ARHGEF28-205ENST00000503341 J3QL48 77 aa9.98□□□□□ -0.81
ARHGEF28-205ENST00000503341 PSPHP1O15172 72 aa9.95□□□□□ -0.82
ARHGEF28-205ENST00000503341 KRTAP3-1Q9BYR8 98 aa9.95□□□□□ -0.82
ARHGEF28-205ENST00000503341 LINC01558Q9Y6Z2 57 aa9.94□□□□□ -0.82
ARHGEF28-205ENST00000503341 COX6B2Q6YFQ2 88 aa9.9□□□□□ -0.83
ARHGEF28-205ENST00000503341 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
ARHGEF28-205ENST00000503341 Q5VV11 94 aa9.87□□□□□ -0.83
ARHGEF28-205ENST00000503341 LRP2P98164 4655 aa9.79□□□□□ -0.84
ARHGEF28-205ENST00000503341 LPAP08519 4548 aa9.79□□□□□ -0.84
ARHGEF28-205ENST00000503341 SEC61GP60059 68 aa9.78□□□□□ -0.84
ARHGEF28-205ENST00000503341 SPTSSBQ8NFR3 76 aa9.73□□□□□ -0.85
ARHGEF28-205ENST00000503341 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms