RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 FRAS1Q86XX4 4008 aa9.83□□□□□ -0.84
ZCCHC3-201ENST00000500893 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
ZCCHC3-201ENST00000500893 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
ZCCHC3-201ENST00000500893 LINC00483Q53H64 154 aa9.81□□□□□ -0.84
ZCCHC3-201ENST00000500893 DNHD1Q96M86 4753 aa9.81□□□□□ -0.84
ZCCHC3-201ENST00000500893 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
ZCCHC3-201ENST00000500893 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
ZCCHC3-201ENST00000500893 Q6ZR54 194 aa9.79□□□□□ -0.84
ZCCHC3-201ENST00000500893 SPANXA2-OT1Q8N9U9 137 aa9.79□□□□□ -0.84
ZCCHC3-201ENST00000500893 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.85
ZCCHC3-201ENST00000500893 A6NED7 52 aa9.76□□□□□ -0.85
ZCCHC3-201ENST00000500893 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
ZCCHC3-201ENST00000500893 Q5VV11 94 aa9.73□□□□□ -0.85
ZCCHC3-201ENST00000500893 Q5W150 140 aa9.73□□□□□ -0.85
ZCCHC3-201ENST00000500893 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.85
ZCCHC3-201ENST00000500893 LIMD2Q9BT23 127 aa9.7□□□□□ -0.86
ZCCHC3-201ENST00000500893 PRR26Q8N8Z3 221 aa9.69□□□□□ -0.86
ZCCHC3-201ENST00000500893 HECTD4Q9Y4D8 3996 aa9.67□□□□□ -0.86
ZCCHC3-201ENST00000500893 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
ZCCHC3-201ENST00000500893 VPS13DQ5THJ4 4388 aa9.66□□□□□ -0.86
ZCCHC3-201ENST00000500893 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
ZCCHC3-201ENST00000500893 HRES1P13985 223 aa9.66□□□□□ -0.86
ZCCHC3-201ENST00000500893 LINC00313P59037 77 aa9.65□□□□□ -0.86
ZCCHC3-201ENST00000500893 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
ZCCHC3-201ENST00000500893 KRTAP10-1P60331 282 aa9.63□□□□□ -0.87
ZCCHC3-201ENST00000500893 DNAH17Q9UFH2 4485 aa9.61□□□□□ -0.87
ZCCHC3-201ENST00000500893 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
ZCCHC3-201ENST00000500893 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
ZCCHC3-201ENST00000500893 IGKV2D-30A0A075B6S6 120 aa9.6□□□□□ -0.87
ZCCHC3-201ENST00000500893 IGKV2-30P06310 120 aa9.6□□□□□ -0.87
ZCCHC3-201ENST00000500893 SSBP3-AS1Q7Z2R9 100 aa9.6□□□□□ -0.87
ZCCHC3-201ENST00000500893 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
ZCCHC3-201ENST00000500893 DNAH11Q96DT5 4516 aa9.6□□□□□ -0.87
ZCCHC3-201ENST00000500893 H3BS24 57 aa9.58□□□□□ -0.88
ZCCHC3-201ENST00000500893 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
ZCCHC3-201ENST00000500893 KRTAP13-2Q52LG2 175 aa9.57□□□□□ -0.88
ZCCHC3-201ENST00000500893 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
ZCCHC3-201ENST00000500893 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
ZCCHC3-201ENST00000500893 LCA10Q71F78 164 aa9.53□□□□□ -0.88
ZCCHC3-201ENST00000500893 SPINK7P58062 85 aa9.51□□□□□ -0.89
ZCCHC3-201ENST00000500893 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
ZCCHC3-201ENST00000500893 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
ZCCHC3-201ENST00000500893 ACYP2P14621 99 aa9.49□□□□□ -0.89
ZCCHC3-201ENST00000500893 Q75L30 129 aa9.49□□□□□ -0.89
ZCCHC3-201ENST00000500893 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
ZCCHC3-201ENST00000500893 SPINK1P00995 79 aa9.47□□□□□ -0.89
ZCCHC3-201ENST00000500893 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.9
ZCCHC3-201ENST00000500893 LINC01558Q9Y6Z2 57 aa9.45□□□□□ -0.9
ZCCHC3-201ENST00000500893 KRTAP13-3Q3SY46 172 aa9.4□□□□□ -0.9
ZCCHC3-201ENST00000500893 C7orf65Q6ZTY9 151 aa9.4□□□□□ -0.91
ZCCHC3-201ENST00000500893 KRTAP1-4P0C5Y4 121 aa9.38□□□□□ -0.91
ZCCHC3-201ENST00000500893 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
ZCCHC3-201ENST00000500893 HYDINQ4G0P3 5121 aa9.37□□□□□ -0.91
ZCCHC3-201ENST00000500893 Q8N1X5 172 aa9.37□□□□□ -0.91
ZCCHC3-201ENST00000500893 CDC42SE1Q9NRR8 79 aa9.37□□□□□ -0.91
ZCCHC3-201ENST00000500893 A0A1B0GU69 56 aa9.37□□□□□ -0.91
ZCCHC3-201ENST00000500893 C9orf92A6NGG3 77 aa9.37□□□□□ -0.91
ZCCHC3-201ENST00000500893 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
ZCCHC3-201ENST00000500893 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
ZCCHC3-201ENST00000500893 Q6ZSA8 131 aa9.35□□□□□ -0.91
ZCCHC3-201ENST00000500893 ALMS1Q8TCU4 4167 aa9.34□□□□□ -0.91
ZCCHC3-201ENST00000500893 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
ZCCHC3-201ENST00000500893 KTN1-AS1Q86SY8 53 aa9.33□□□□□ -0.92
ZCCHC3-201ENST00000500893 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
ZCCHC3-201ENST00000500893 DMAC1Q96GE9 116 aa9.32□□□□□ -0.92
ZCCHC3-201ENST00000500893 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
ZCCHC3-201ENST00000500893 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
ZCCHC3-201ENST00000500893 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
ZCCHC3-201ENST00000500893 PKHD1P08F94 4074 aa9.21□□□□□ -0.93
ZCCHC3-201ENST00000500893 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.94
ZCCHC3-201ENST00000500893 A6NN06 94 aa9.19□□□□□ -0.94
ZCCHC3-201ENST00000500893 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
ZCCHC3-201ENST00000500893 FAT1Q14517 4588 aa9.16□□□□□ -0.94
ZCCHC3-201ENST00000500893 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
ZCCHC3-201ENST00000500893 PKD1P98161 4303 aa9.13□□□□□ -0.95
ZCCHC3-201ENST00000500893 UQCR11O14957 56 aa9.11□□□□□ -0.95
ZCCHC3-201ENST00000500893 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
ZCCHC3-201ENST00000500893 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
ZCCHC3-201ENST00000500893 SACSQ9NZJ4 4579 aa8.95□□□□□ -0.98
ZCCHC3-201ENST00000500893 LINC01554Q52M75 96 aa8.92□□□□□ -0.98
ZCCHC3-201ENST00000500893 A8MUU9 505 aa8.86□□□□□ -0.99
ZCCHC3-201ENST00000500893 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
ZCCHC3-201ENST00000500893 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
ZCCHC3-201ENST00000500893 C20orf166-AS1Q96NR2 134 aa8.85□□□□□ -0.99
ZCCHC3-201ENST00000500893 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
ZCCHC3-201ENST00000500893 A0A1B0GVY2 172 aa8.82□□□□□ -1
ZCCHC3-201ENST00000500893 A0A1B0GU33 70 aa8.81□□□□□ -1
ZCCHC3-201ENST00000500893 CSAG1Q6PB30 78 aa8.81□□□□□ -1
ZCCHC3-201ENST00000500893 MYCBP2O75592 4640 aa8.8□□□□□ -1
ZCCHC3-201ENST00000500893 LRP1Q07954 4544 aaKnown RBP8.8□□□□□ -1
ZCCHC3-201ENST00000500893 CRIPTQ9P021 101 aa8.8□□□□□ -1
ZCCHC3-201ENST00000500893 KRTAP10-4P60372 401 aaPredicted RBP8.79□□□□□ -1
ZCCHC3-201ENST00000500893 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
ZCCHC3-201ENST00000500893 H0YAA0 97 aa8.76□□□□□ -1.01
ZCCHC3-201ENST00000500893 Q5VSD8 79 aa8.76□□□□□ -1.01
ZCCHC3-201ENST00000500893 KRTAP21-3Q3LHN1 58 aa8.73□□□□□ -1.01
ZCCHC3-201ENST00000500893 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.01
ZCCHC3-201ENST00000500893 A0A0D9SG42 100 aa8.69□□□□□ -1.02
ZCCHC3-201ENST00000500893 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
ZCCHC3-201ENST00000500893 RYR2Q92736 4967 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms