RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-206ENST00000499045 C14orf132Q9NPU4 83 aa13.23□□□□□ -0.29
CHFR-206ENST00000499045 H3BT86 120 aa13.2□□□□□ -0.3
CHFR-206ENST00000499045 IGHV6-1A0A0B4J1U7 121 aa13.18□□□□□ -0.3
CHFR-206ENST00000499045 J3KT08 172 aa13.18□□□□□ -0.3
CHFR-206ENST00000499045 A0A1B0GVX0 72 aa13.17□□□□□ -0.3
CHFR-206ENST00000499045 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
CHFR-206ENST00000499045 C8orf87E5RJ46 101 aa13.13□□□□□ -0.31
CHFR-206ENST00000499045 MT1HP80294 61 aa13.13□□□□□ -0.31
CHFR-206ENST00000499045 COL5A1-AS1Q5SY13 56 aa13.12□□□□□ -0.31
CHFR-206ENST00000499045 SPCS1Q9Y6A9 102 aa13.12□□□□□ -0.31
CHFR-206ENST00000499045 NDUFB1O75438 58 aa13.03□□□□□ -0.32
CHFR-206ENST00000499045 COX6B2Q6YFQ2 88 aa13.03□□□□□ -0.32
CHFR-206ENST00000499045 A8MWP4 228 aa13.02□□□□□ -0.33
CHFR-206ENST00000499045 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.33
CHFR-206ENST00000499045 NREPQ16612 68 aa13.01□□□□□ -0.33
CHFR-206ENST00000499045 IGKV3D-7A0A0C4DH55 119 aa12.99□□□□□ -0.33
CHFR-206ENST00000499045 K7EP34 96 aa12.96□□□□□ -0.33
CHFR-206ENST00000499045 KRTAP9-2Q9BYQ4 174 aa12.96□□□□□ -0.33
CHFR-206ENST00000499045 C8orf17Q9NRJ1 99 aa12.96□□□□□ -0.33
CHFR-206ENST00000499045 PRO0461Q9UI25 63 aa12.96□□□□□ -0.33
CHFR-206ENST00000499045 FLGP20930 4061 aaPredicted RBP12.95□□□□□ -0.34
CHFR-206ENST00000499045 PCP4L1A6NKN8 68 aa12.93□□□□□ -0.34
CHFR-206ENST00000499045 PRR15Q8IV56 129 aa12.93□□□□□ -0.34
CHFR-206ENST00000499045 Q8N9P0 234 aaPredicted RBP12.92□□□□□ -0.34
CHFR-206ENST00000499045 ZCCHC13Q8WW36 166 aaKnown RBP12.86□□□□□ -0.35
CHFR-206ENST00000499045 KRTAP10-6P60371 365 aaPredicted RBP12.84□□□□□ -0.35
CHFR-206ENST00000499045 Q6ZVQ6 151 aa12.84□□□□□ -0.35
CHFR-206ENST00000499045 LORP23490 312 aaPredicted RBP12.83□□□□□ -0.36
CHFR-206ENST00000499045 MMP24-AS1A0A0U1RRL7 71 aa12.82□□□□□ -0.36
CHFR-206ENST00000499045 M0R2T5 61 aa12.82□□□□□ -0.36
CHFR-206ENST00000499045 K7EQZ3 153 aa12.81□□□□□ -0.36
CHFR-206ENST00000499045 HRES1P13985 223 aa12.81□□□□□ -0.36
CHFR-206ENST00000499045 BPY2O14599 106 aa12.8□□□□□ -0.36
CHFR-206ENST00000499045 GTF2H5Q6ZYL4 71 aa12.8□□□□□ -0.36
CHFR-206ENST00000499045 MPLKIPQ8TAP9 179 aa12.8□□□□□ -0.36
CHFR-206ENST00000499045 TMEM254Q8TBM7 123 aa12.76□□□□□ -0.37
CHFR-206ENST00000499045 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
CHFR-206ENST00000499045 MRPL34Q9BQ48 92 aaKnown RBP12.75□□□□□ -0.37
CHFR-206ENST00000499045 LINC00846Q9NV44 126 aa12.72□□□□□ -0.37
CHFR-206ENST00000499045 hDV103S1A0JD37 113 aa12.71□□□□□ -0.37
CHFR-206ENST00000499045 F8W1H4 67 aa12.71□□□□□ -0.37
CHFR-206ENST00000499045 SPINK7P58062 85 aa12.71□□□□□ -0.37
CHFR-206ENST00000499045 RBM12B-AS1Q9P1G2 102 aa12.68□□□□□ -0.38
CHFR-206ENST00000499045 Q8N9L7 120 aa12.67□□□□□ -0.38
CHFR-206ENST00000499045 FAM236DA0A1B0GTK5 79 aa12.65□□□□□ -0.38
CHFR-206ENST00000499045 FAM236CP0DP71 79 aa12.65□□□□□ -0.38
CHFR-206ENST00000499045 UBL5Q9BZL1 73 aa12.65□□□□□ -0.38
CHFR-206ENST00000499045 ETDBQ3ZM63 59 aa12.63□□□□□ -0.39
CHFR-206ENST00000499045 NDUFS5O43920 106 aa12.58□□□□□ -0.4
CHFR-206ENST00000499045 WFDC13Q8IUB5 93 aa12.57□□□□□ -0.4
CHFR-206ENST00000499045 CASC2Q6XLA1 102 aa12.56□□□□□ -0.4
CHFR-206ENST00000499045 Q5W150 140 aa12.5□□□□□ -0.41
CHFR-206ENST00000499045 KRTAP9-8Q9BYQ0 159 aa12.48□□□□□ -0.41
CHFR-206ENST00000499045 HCG22E2RYF7 251 aa12.47□□□□□ -0.41
CHFR-206ENST00000499045 KRTAP9-6A0A140TA67 174 aa12.44□□□□□ -0.42
CHFR-206ENST00000499045 CXCL6P80162 114 aa12.44□□□□□ -0.42
CHFR-206ENST00000499045 IGKV2D-30A0A075B6S6 120 aa12.36□□□□□ -0.43
CHFR-206ENST00000499045 IGKV2-30P06310 120 aa12.36□□□□□ -0.43
CHFR-206ENST00000499045 C7orf65Q6ZTY9 151 aa12.36□□□□□ -0.43
CHFR-206ENST00000499045 FSIP2Q5CZC0 6907 aa12.36□□□□□ -0.43
CHFR-206ENST00000499045 ACYP1P07311 99 aa12.34□□□□□ -0.43
CHFR-206ENST00000499045 FAM240AA0A1B0GVK7 77 aa12.32□□□□□ -0.44
CHFR-206ENST00000499045 MT2AP02795 61 aa12.31□□□□□ -0.44
CHFR-206ENST00000499045 CRCT1Q9UGL9 99 aa12.29□□□□□ -0.44
CHFR-206ENST00000499045 A0A1B0GV90 55 aa12.26□□□□□ -0.45
CHFR-206ENST00000499045 TP53AIP1Q9HCN2 124 aa12.23□□□□□ -0.45
CHFR-206ENST00000499045 H1FX-AS1Q4G0G2 97 aa12.22□□□□□ -0.45
CHFR-206ENST00000499045 MT1FP04733 61 aa12.21□□□□□ -0.45
CHFR-206ENST00000499045 ATP5EP2Q5VTU8 51 aa12.19□□□□□ -0.46
CHFR-206ENST00000499045 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
CHFR-206ENST00000499045 KRTAP10-10P60014 251 aa12.11□□□□□ -0.47
CHFR-206ENST00000499045 KRTAP9-3Q9BYQ3 159 aa12.08□□□□□ -0.48
CHFR-206ENST00000499045 LINC00643Q86TS7 51 aa12.06□□□□□ -0.48
CHFR-206ENST00000499045 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
CHFR-206ENST00000499045 USH2AO75445 5202 aa12.04□□□□□ -0.48
CHFR-206ENST00000499045 KRTAP3-1Q9BYR8 98 aa12.03□□□□□ -0.48
CHFR-206ENST00000499045 TRAV22A0A0B4J277 110 aa11.98□□□□□ -0.49
CHFR-206ENST00000499045 LCE2BO14633 110 aa11.97□□□□□ -0.49
CHFR-206ENST00000499045 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.49
CHFR-206ENST00000499045 A0A087WVE0 104 aa11.95□□□□□ -0.5
CHFR-206ENST00000499045 C1orf64Q8NEQ6 169 aa11.95□□□□□ -0.5
CHFR-206ENST00000499045 UQCRQO14949 82 aa11.91□□□□□ -0.5
CHFR-206ENST00000499045 LOC101927531A0A1B0GV80 90 aa11.9□□□□□ -0.5
CHFR-206ENST00000499045 SSPOA2VEC9 5147 aa11.9□□□□□ -0.5
CHFR-206ENST00000499045 J3QR89 54 aa11.86□□□□□ -0.51
CHFR-206ENST00000499045 S4R3F8 94 aa11.83□□□□□ -0.52
CHFR-206ENST00000499045 H0Y9P7 68 aa11.82□□□□□ -0.52
CHFR-206ENST00000499045 ATOX1O00244 68 aa11.81□□□□□ -0.52
CHFR-206ENST00000499045 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
CHFR-206ENST00000499045 LCA10Q71F78 164 aa11.78□□□□□ -0.52
CHFR-206ENST00000499045 OCR1Q9BZK8 76 aa11.75□□□□□ -0.53
CHFR-206ENST00000499045 CSAG1Q6PB30 78 aa11.72□□□□□ -0.53
CHFR-206ENST00000499045 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
CHFR-206ENST00000499045 KRTAP19-1Q8IUB9 90 aa11.65□□□□□ -0.54
CHFR-206ENST00000499045 LINC00208Q96KT6 92 aa11.65□□□□□ -0.54
CHFR-206ENST00000499045 MP68P56378 58 aa11.61□□□□□ -0.55
CHFR-206ENST00000499045 KLKP1Q107X0 134 aa11.59□□□□□ -0.55
CHFR-206ENST00000499045 FCGBPQ9Y6R7 5405 aaPredicted RBP11.57□□□□□ -0.56
CHFR-206ENST00000499045 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
CHFR-206ENST00000499045 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms