RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	RPS29	P62273	56 aa	Known RBP	4.23	□□□□□ -1.73
GARNL3-222	ENST00000498801	IGFL1	Q6UW32	110 aa		4.23	□□□□□ -1.73
GARNL3-222	ENST00000498801	GTF2H5	Q6ZYL4	71 aa		4.23	□□□□□ -1.73
GARNL3-222	ENST00000498801	ANKRD29	Q8N6D5	301 aa		4.23	□□□□□ -1.73
GARNL3-222	ENST00000498801		H3BT86	120 aa		4.22	□□□□□ -1.73
GARNL3-222	ENST00000498801	SPINK1	P00995	79 aa		4.22	□□□□□ -1.73
GARNL3-222	ENST00000498801	MTURN	Q8N3F0	131 aa		4.22	□□□□□ -1.73
GARNL3-222	ENST00000498801	KRTAP10-6	P60371	365 aa	Predicted RBP	4.21	□□□□□ -1.74
GARNL3-222	ENST00000498801	CD164	Q04900	197 aa		4.21	□□□□□ -1.74
GARNL3-222	ENST00000498801	HRCT1	Q6UXD1	115 aa		4.21	□□□□□ -1.74
GARNL3-222	ENST00000498801	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.2	□□□□□ -1.74
GARNL3-222	ENST00000498801	RBM3	P98179	157 aa	Known RBP	4.2	□□□□□ -1.74
GARNL3-222	ENST00000498801	KRTAP10-12	P60413	245 aa		4.19	□□□□□ -1.74
GARNL3-222	ENST00000498801	DSCR8	Q96T75	97 aa		4.19	□□□□□ -1.74
GARNL3-222	ENST00000498801	PRO0461	Q9UI25	63 aa		4.19	□□□□□ -1.74
GARNL3-222	ENST00000498801	TRBV7-4	A0A0J9YYF1	115 aa		4.18	□□□□□ -1.74
GARNL3-222	ENST00000498801	TRBV7-7	A0A0K0K1E9	115 aa		4.18	□□□□□ -1.74
GARNL3-222	ENST00000498801		Q6Q795	121 aa		4.18	□□□□□ -1.74
GARNL3-222	ENST00000498801	TEN1	Q86WV5	123 aa		4.18	□□□□□ -1.74
GARNL3-222	ENST00000498801	OBSCN-AS1	Q96MR7	158 aa		4.18	□□□□□ -1.74
GARNL3-222	ENST00000498801	LIMD2	Q9BT23	127 aa		4.18	□□□□□ -1.74
GARNL3-222	ENST00000498801		A0A1B0GV90	55 aa		4.17	□□□□□ -1.74
GARNL3-222	ENST00000498801		A0A1W2PNM2	257 aa		4.17	□□□□□ -1.74
GARNL3-222	ENST00000498801		F8W1H4	67 aa		4.17	□□□□□ -1.74
GARNL3-222	ENST00000498801	CCK	P06307	115 aa		4.17	□□□□□ -1.74
GARNL3-222	ENST00000498801		Q5XG85	94 aa		4.17	□□□□□ -1.74
GARNL3-222	ENST00000498801	C14orf132	Q9NPU4	83 aa		4.17	□□□□□ -1.74
GARNL3-222	ENST00000498801	LOC110117498	A0A087WWA1	95 aa		4.16	□□□□□ -1.74
GARNL3-222	ENST00000498801	PRR4	Q16378	134 aa		4.16	□□□□□ -1.74
GARNL3-222	ENST00000498801	RETNLB	Q9BQ08	111 aa		4.16	□□□□□ -1.74
GARNL3-222	ENST00000498801	PDE6G	P18545	87 aa		4.15	□□□□□ -1.75
GARNL3-222	ENST00000498801		Q6ZQT0	140 aa		4.15	□□□□□ -1.75
GARNL3-222	ENST00000498801	FP248	Q71RG6	208 aa	Predicted RBP	4.15	□□□□□ -1.75
GARNL3-222	ENST00000498801	VPS25	Q9BRG1	176 aa		4.15	□□□□□ -1.75
GARNL3-222	ENST00000498801		A0A087WSZ3	146 aa		4.14	□□□□□ -1.75
GARNL3-222	ENST00000498801	TPRXL	Q17RH7	258 aa		4.14	□□□□□ -1.75
GARNL3-222	ENST00000498801	ASB16-AS1	Q495Z4	193 aa		4.13	□□□□□ -1.75
GARNL3-222	ENST00000498801	SS18L2	Q9UHA2	77 aa		4.13	□□□□□ -1.75
GARNL3-222	ENST00000498801	LRP2	P98164	4655 aa		4.12	□□□□□ -1.75
GARNL3-222	ENST00000498801	ETDB	Q3ZM63	59 aa		4.12	□□□□□ -1.75
GARNL3-222	ENST00000498801	C1orf195	Q5TG92	126 aa		4.12	□□□□□ -1.75
GARNL3-222	ENST00000498801	UBR4	Q5T4S7	5183 aa		4.11	□□□□□ -1.75
GARNL3-222	ENST00000498801		A0A1B0GW54	56 aa		4.11	□□□□□ -1.75
GARNL3-222	ENST00000498801	KRTAP13-3	Q3SY46	172 aa		4.08	□□□□□ -1.76
GARNL3-222	ENST00000498801		Q96NJ1	140 aa		4.08	□□□□□ -1.76
GARNL3-222	ENST00000498801	LCE3C	Q5T5A8	94 aa		4.07	□□□□□ -1.76
GARNL3-222	ENST00000498801	LINC00472	Q9H8W2	130 aa		4.07	□□□□□ -1.76
GARNL3-222	ENST00000498801	DEFB116	Q30KQ4	102 aa		4.06	□□□□□ -1.76
GARNL3-222	ENST00000498801	IGKV4-1	P06312	121 aa		4.05	□□□□□ -1.76
GARNL3-222	ENST00000498801	NREP	Q16612	68 aa		4.05	□□□□□ -1.76
GARNL3-222	ENST00000498801	SIGMAR1	Q99720	223 aa		4.05	□□□□□ -1.76
GARNL3-222	ENST00000498801		J3KT08	172 aa		4.04	□□□□□ -1.76
GARNL3-222	ENST00000498801	LINC00846	Q9NV44	126 aa		4.04	□□□□□ -1.76
GARNL3-222	ENST00000498801	C9orf92	A6NGG3	77 aa		4.02	□□□□□ -1.77
GARNL3-222	ENST00000498801	ACYP1	P07311	99 aa		4.02	□□□□□ -1.77
GARNL3-222	ENST00000498801	UBL5	Q9BZL1	73 aa		4.02	□□□□□ -1.77
GARNL3-222	ENST00000498801	LPA	P08519	4548 aa		4.02	□□□□□ -1.77
GARNL3-222	ENST00000498801	FAM240A	A0A1B0GVK7	77 aa		4.01	□□□□□ -1.77
GARNL3-222	ENST00000498801	KRTAP10-7	P60409	375 aa	Predicted RBP	4.01	□□□□□ -1.77
GARNL3-222	ENST00000498801	IGHV6-1	A0A0B4J1U7	121 aa		4	□□□□□ -1.77
GARNL3-222	ENST00000498801		A0A1B0GVX0	72 aa		4	□□□□□ -1.77
GARNL3-222	ENST00000498801		A8MWP4	228 aa		4	□□□□□ -1.77
GARNL3-222	ENST00000498801	BPY2	O14599	106 aa		4	□□□□□ -1.77
GARNL3-222	ENST00000498801	KRTAP10-5	P60370	271 aa		4	□□□□□ -1.77
GARNL3-222	ENST00000498801	NDUFB1	O75438	58 aa		3.99	□□□□□ -1.77
GARNL3-222	ENST00000498801	LINC00313	P59037	77 aa		3.99	□□□□□ -1.77
GARNL3-222	ENST00000498801	SEC61G	P60059	68 aa		3.99	□□□□□ -1.77
GARNL3-222	ENST00000498801	IGKV3D-7	A0A0C4DH55	119 aa		3.98	□□□□□ -1.77
GARNL3-222	ENST00000498801	C8orf87	E5RJ46	101 aa		3.98	□□□□□ -1.77
GARNL3-222	ENST00000498801		J3QR89	54 aa		3.98	□□□□□ -1.77
GARNL3-222	ENST00000498801	LCE1E	Q5T753	118 aa		3.98	□□□□□ -1.77
GARNL3-222	ENST00000498801		K7EQZ3	153 aa		3.97	□□□□□ -1.77
GARNL3-222	ENST00000498801	PRR15	Q8IV56	129 aa		3.97	□□□□□ -1.77
GARNL3-222	ENST00000498801		Q8N9L7	120 aa		3.95	□□□□□ -1.78
GARNL3-222	ENST00000498801	C8orf17	Q9NRJ1	99 aa		3.95	□□□□□ -1.78
GARNL3-222	ENST00000498801	RPL37	P61927	97 aa	Known RBP	3.94	□□□□□ -1.78
GARNL3-222	ENST00000498801	MUC2	Q02817	5179 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801	RNF213	Q63HN8	5207 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801	MMP24-AS1	A0A0U1RRL7	71 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801		A8MUU9	505 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801		K7ERU9	68 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801	ATP5EP2	Q5VTU8	51 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801	LINC00643	Q86TS7	51 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801	C20orf166-AS1	Q96NR2	134 aa		3.93	□□□□□ -1.78
GARNL3-222	ENST00000498801	hDV103S1	A0JD37	113 aa		3.91	□□□□□ -1.78
GARNL3-222	ENST00000498801		A8MU10	97 aa		3.91	□□□□□ -1.78
GARNL3-222	ENST00000498801	PCOTH	Q58A44	107 aa		3.91	□□□□□ -1.78
GARNL3-222	ENST00000498801	TMEM254	Q8TBM7	123 aa		3.91	□□□□□ -1.78
GARNL3-222	ENST00000498801	HCG22	E2RYF7	251 aa		3.9	□□□□□ -1.79
GARNL3-222	ENST00000498801	CASC2	Q6XLA1	102 aa		3.9	□□□□□ -1.79
GARNL3-222	ENST00000498801	ATP11AUN	Q6ZP68	121 aa		3.9	□□□□□ -1.79
GARNL3-222	ENST00000498801	WFDC13	Q8IUB5	93 aa		3.9	□□□□□ -1.79
GARNL3-222	ENST00000498801	MRPL34	Q9BQ48	92 aa	Known RBP	3.9	□□□□□ -1.79
GARNL3-222	ENST00000498801		A0A0U1RQV1	116 aa		3.89	□□□□□ -1.79
GARNL3-222	ENST00000498801	HIST1H4A	P62805	103 aa	Known RBP	3.88	□□□□□ -1.79
GARNL3-222	ENST00000498801	KRTAP4-1	Q9BYQ7	146 aa		3.88	□□□□□ -1.79
GARNL3-222	ENST00000498801	MUC17	Q685J3	4493 aa		3.86	□□□□□ -1.79
GARNL3-222	ENST00000498801	NDUFS5	O43920	106 aa		3.86	□□□□□ -1.79
GARNL3-222	ENST00000498801		A0A087WVE0	104 aa		3.85	□□□□□ -1.79
GARNL3-222	ENST00000498801	ZCCHC13	Q8WW36	166 aa	Known RBP	3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms