RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 DEFB116Q30KQ4 102 aa15.31■□□□□ 0.04
HOXB3-212ENST00000498678 IGKV4-1P06312 121 aa15.31■□□□□ 0.04
HOXB3-212ENST00000498678 DSCR10P59022 87 aa15.31■□□□□ 0.04
HOXB3-212ENST00000498678 LINC00472Q9H8W2 130 aa15.29■□□□□ 0.04
HOXB3-212ENST00000498678 PLA2G1BP04054 148 aaKnown RBP15.28■□□□□ 0.04
HOXB3-212ENST00000498678 RBM12B-AS1Q9P1G2 102 aa15.27■□□□□ 0.04
HOXB3-212ENST00000498678 TRAV22A0A0B4J277 110 aa15.26■□□□□ 0.03
HOXB3-212ENST00000498678 FAT1Q14517 4588 aa15.25■□□□□ 0.03
HOXB3-212ENST00000498678 NDUFS5O43920 106 aa15.24■□□□□ 0.03
HOXB3-212ENST00000498678 C1orf64Q8NEQ6 169 aa15.24■□□□□ 0.03
HOXB3-212ENST00000498678 CYP4F30PQ9H0H9 118 aa15.22■□□□□ 0.03
HOXB3-212ENST00000498678 K7EQZ3 153 aa15.21■□□□□ 0.03
HOXB3-212ENST00000498678 C4orf48Q5BLP8 95 aa15.21■□□□□ 0.02
HOXB3-212ENST00000498678 CDK2AP2O75956 126 aa15.2■□□□□ 0.02
HOXB3-212ENST00000498678 Q96NJ1 140 aa15.2■□□□□ 0.02
HOXB3-212ENST00000498678 PSPHP1O15172 72 aa15.18■□□□□ 0.02
HOXB3-212ENST00000498678 FAM229AH3BQW9 127 aa15.13■□□□□ 0.01
HOXB3-212ENST00000498678 TYMSOSQ8TAI1 123 aa15.13■□□□□ 0.01
HOXB3-212ENST00000498678 PRR26Q8N8Z3 221 aa15.11■□□□□ 0.01
HOXB3-212ENST00000498678 A8MWP4 228 aa15.11■□□□□ 0.01
HOXB3-212ENST00000498678 ZCCHC13Q8WW36 166 aaKnown RBP15.11■□□□□ 0.01
HOXB3-212ENST00000498678 ATP11AUNQ6ZP68 121 aa15.1■□□□□ 0.01
HOXB3-212ENST00000498678 HSPG2P98160 4391 aa15.07■□□□□ 0
HOXB3-212ENST00000498678 A8MUN3 132 aa15.06■□□□□ 0
HOXB3-212ENST00000498678 Q5VV11 94 aa15.05■□□□□ 0
HOXB3-212ENST00000498678 ASB16-AS1Q495Z4 193 aa15.04■□□□□ -0
HOXB3-212ENST00000498678 Q5VSD8 79 aa15.04■□□□□ -0
HOXB3-212ENST00000498678 LIMD2Q9BT23 127 aa15.03■□□□□ -0
HOXB3-212ENST00000498678 RYR1P21817 5038 aa15.02■□□□□ -0
HOXB3-212ENST00000498678 HCG22E2RYF7 251 aa15.01□□□□□ -0.01
HOXB3-212ENST00000498678 NDUFB1O75438 58 aa15□□□□□ -0.01
HOXB3-212ENST00000498678 KRTAP17-1Q9BYP8 105 aa14.97□□□□□ -0.01
HOXB3-212ENST00000498678 EPPK1P58107 5090 aaKnown RBP14.96□□□□□ -0.01
HOXB3-212ENST00000498678 SPINK1P00995 79 aa14.95□□□□□ -0.02
HOXB3-212ENST00000498678 A6NN06 94 aa14.95□□□□□ -0.02
HOXB3-212ENST00000498678 WFDC13Q8IUB5 93 aa14.94□□□□□ -0.02
HOXB3-212ENST00000498678 LINC00304Q8N9R0 145 aa14.94□□□□□ -0.02
HOXB3-212ENST00000498678 PKHD1L1Q86WI1 4243 aa14.93□□□□□ -0.02
HOXB3-212ENST00000498678 CHKB-CPT1BH3BT56 60 aa14.92□□□□□ -0.02
HOXB3-212ENST00000498678 KRTAP29-1A8MX34 341 aaPredicted RBP14.92□□□□□ -0.02
HOXB3-212ENST00000498678 A0A1B0GVX0 72 aa14.91□□□□□ -0.02
HOXB3-212ENST00000498678 MMP24-AS1A0A0U1RRL7 71 aa14.9□□□□□ -0.02
HOXB3-212ENST00000498678 KIAA1109Q2LD37 5005 aa14.89□□□□□ -0.03
HOXB3-212ENST00000498678 SPAG11AQ6PDA7 123 aa14.89□□□□□ -0.03
HOXB3-212ENST00000498678 IGHV6-1A0A0B4J1U7 121 aa14.88□□□□□ -0.03
HOXB3-212ENST00000498678 CASC2Q6XLA1 102 aa14.88□□□□□ -0.03
HOXB3-212ENST00000498678 C7orf65Q6ZTY9 151 aa14.88□□□□□ -0.03
HOXB3-212ENST00000498678 A8MU10 97 aa14.87□□□□□ -0.03
HOXB3-212ENST00000498678 Q8N9P0 234 aaPredicted RBP14.86□□□□□ -0.03
HOXB3-212ENST00000498678 C8orf17Q9NRJ1 99 aa14.85□□□□□ -0.03
HOXB3-212ENST00000498678 RPS29P62273 56 aaKnown RBP14.85□□□□□ -0.03
HOXB3-212ENST00000498678 Q75L30 129 aa14.85□□□□□ -0.03
HOXB3-212ENST00000498678 LCA10Q71F78 164 aa14.84□□□□□ -0.03
HOXB3-212ENST00000498678 Q8N1X5 172 aa14.83□□□□□ -0.04
HOXB3-212ENST00000498678 SPTSSBQ8NFR3 76 aa14.83□□□□□ -0.04
HOXB3-212ENST00000498678 NOTCH2NLQ7Z3S9 236 aa14.81□□□□□ -0.04
HOXB3-212ENST00000498678 C8orf87E5RJ46 101 aa14.8□□□□□ -0.04
HOXB3-212ENST00000498678 SPANXA2-OT1Q8N9U9 137 aa14.8□□□□□ -0.04
HOXB3-212ENST00000498678 LOC101927531A0A1B0GV80 90 aa14.79□□□□□ -0.04
HOXB3-212ENST00000498678 CDC42SE1Q9NRR8 79 aa14.78□□□□□ -0.04
HOXB3-212ENST00000498678 PRR15LQ9BU68 103 aa14.74□□□□□ -0.05
HOXB3-212ENST00000498678 KRTAP10-8P60410 259 aa14.73□□□□□ -0.05
HOXB3-212ENST00000498678 LINC00208Q96KT6 92 aa14.72□□□□□ -0.05
HOXB3-212ENST00000498678 A6NED7 52 aa14.7□□□□□ -0.06
HOXB3-212ENST00000498678 LRP1Q07954 4544 aaKnown RBP14.68□□□□□ -0.06
HOXB3-212ENST00000498678 MP68P56378 58 aa14.67□□□□□ -0.06
HOXB3-212ENST00000498678 PRR4Q16378 134 aa14.67□□□□□ -0.06
HOXB3-212ENST00000498678 MRPL34Q9BQ48 92 aaKnown RBP14.67□□□□□ -0.06
HOXB3-212ENST00000498678 H3BPC8 53 aa14.66□□□□□ -0.06
HOXB3-212ENST00000498678 LINC00313P59037 77 aa14.65□□□□□ -0.06
HOXB3-212ENST00000498678 TNXBP22105 4242 aa14.6□□□□□ -0.07
HOXB3-212ENST00000498678 FLG2Q5D862 2391 aaPredicted RBP14.58□□□□□ -0.08
HOXB3-212ENST00000498678 H3BS24 57 aa14.57□□□□□ -0.08
HOXB3-212ENST00000498678 TP53AIP1Q9HCN2 124 aa14.56□□□□□ -0.08
HOXB3-212ENST00000498678 FAT3Q8TDW7 4589 aa14.55□□□□□ -0.08
HOXB3-212ENST00000498678 KRTAP16-1A8MUX0 517 aa14.52□□□□□ -0.08
HOXB3-212ENST00000498678 KRTAP4-5Q9BYR2 181 aa14.51□□□□□ -0.09
HOXB3-212ENST00000498678 RETNLBQ9BQ08 111 aa14.51□□□□□ -0.09
HOXB3-212ENST00000498678 MT1HL1P0DM35 61 aa14.5□□□□□ -0.09
HOXB3-212ENST00000498678 LINC01558Q9Y6Z2 57 aa14.49□□□□□ -0.09
HOXB3-212ENST00000498678 H0Y9P7 68 aa14.48□□□□□ -0.09
HOXB3-212ENST00000498678 MYCBP2O75592 4640 aa14.45□□□□□ -0.1
HOXB3-212ENST00000498678 COA5Q86WW8 74 aa14.4□□□□□ -0.1
HOXB3-212ENST00000498678 LINC01554Q52M75 96 aa14.37□□□□□ -0.11
HOXB3-212ENST00000498678 Q5W150 140 aa14.37□□□□□ -0.11
HOXB3-212ENST00000498678 DMBT1Q9UGM3 2413 aaPredicted RBP14.36□□□□□ -0.11
HOXB3-212ENST00000498678 IGLV7-46A0A075B6I9 117 aa14.35□□□□□ -0.11
HOXB3-212ENST00000498678 BIRC6Q9NR09 4857 aa14.34□□□□□ -0.11
HOXB3-212ENST00000498678 C9orf92A6NGG3 77 aa14.33□□□□□ -0.11
HOXB3-212ENST00000498678 KRTAP13-3Q3SY46 172 aa14.33□□□□□ -0.11
HOXB3-212ENST00000498678 HERC2O95714 4834 aa14.2□□□□□ -0.14
HOXB3-212ENST00000498678 SPINK7P58062 85 aa14.2□□□□□ -0.14
HOXB3-212ENST00000498678 C20orf166-AS1Q96NR2 134 aa14.19□□□□□ -0.14
HOXB3-212ENST00000498678 A8MUU9 505 aa14.17□□□□□ -0.14
HOXB3-212ENST00000498678 ABCA13Q86UQ4 5058 aa14.17□□□□□ -0.14
HOXB3-212ENST00000498678 PRAC1Q96KF2 57 aa14.11□□□□□ -0.15
HOXB3-212ENST00000498678 PCOTHQ58A44 107 aa14.1□□□□□ -0.15
HOXB3-212ENST00000498678 IGKV2-30P06310 120 aa14.06□□□□□ -0.16
HOXB3-212ENST00000498678 J3QL48 77 aa13.99□□□□□ -0.17
HOXB3-212ENST00000498678 IGKV2D-30A0A075B6S6 120 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms