RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
COL6A1-206ENST00000498614 PSORS1C2Q9UIG4 136 aa9.83□□□□□ -0.84
COL6A1-206ENST00000498614 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
COL6A1-206ENST00000498614 MOBPQ13875 183 aa9.83□□□□□ -0.84
COL6A1-206ENST00000498614 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
COL6A1-206ENST00000498614 C1orf134Q5TEV5 83 aa9.82□□□□□ -0.84
COL6A1-206ENST00000498614 Q75L30 129 aa9.82□□□□□ -0.84
COL6A1-206ENST00000498614 DNAH17Q9UFH2 4485 aa9.82□□□□□ -0.84
COL6A1-206ENST00000498614 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
COL6A1-206ENST00000498614 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
COL6A1-206ENST00000498614 LCA10Q71F78 164 aa9.8□□□□□ -0.84
COL6A1-206ENST00000498614 IGHV6-1A0A0B4J1U7 121 aa9.8□□□□□ -0.84
COL6A1-206ENST00000498614 LINC00483Q53H64 154 aa9.8□□□□□ -0.84
COL6A1-206ENST00000498614 ANAPC11Q9NYG5 84 aa9.8□□□□□ -0.84
COL6A1-206ENST00000498614 DNAH8Q96JB1 4490 aa9.79□□□□□ -0.84
COL6A1-206ENST00000498614 NDUFS5O43920 106 aa9.79□□□□□ -0.84
COL6A1-206ENST00000498614 A0A1B0GVX0 72 aa9.78□□□□□ -0.84
COL6A1-206ENST00000498614 A6NED7 52 aa9.78□□□□□ -0.84
COL6A1-206ENST00000498614 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.84
COL6A1-206ENST00000498614 PLAC8Q9NZF1 115 aa9.77□□□□□ -0.85
COL6A1-206ENST00000498614 SPTSSBQ8NFR3 76 aa9.77□□□□□ -0.85
COL6A1-206ENST00000498614 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
COL6A1-206ENST00000498614 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
COL6A1-206ENST00000498614 A0A087X002 238 aa9.74□□□□□ -0.85
COL6A1-206ENST00000498614 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
COL6A1-206ENST00000498614 ZNF861PO60384 105 aa9.74□□□□□ -0.85
COL6A1-206ENST00000498614 RYR2Q92736 4967 aa9.73□□□□□ -0.85
COL6A1-206ENST00000498614 HRES1P13985 223 aa9.72□□□□□ -0.85
COL6A1-206ENST00000498614 MRPL34Q9BQ48 92 aaKnown RBP9.72□□□□□ -0.85
COL6A1-206ENST00000498614 LINC01558Q9Y6Z2 57 aa9.72□□□□□ -0.85
COL6A1-206ENST00000498614 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
COL6A1-206ENST00000498614 CDK2AP2O75956 126 aa9.71□□□□□ -0.85
COL6A1-206ENST00000498614 ATP11AUNQ6ZP68 121 aa9.71□□□□□ -0.86
COL6A1-206ENST00000498614 RYR3Q15413 4870 aa9.69□□□□□ -0.86
COL6A1-206ENST00000498614 CDC42SE1Q9NRR8 79 aa9.67□□□□□ -0.86
COL6A1-206ENST00000498614 PKD1P98161 4303 aa9.67□□□□□ -0.86
COL6A1-206ENST00000498614 DNAH5Q8TE73 4624 aa9.67□□□□□ -0.86
COL6A1-206ENST00000498614 PKHD1P08F94 4074 aa9.66□□□□□ -0.86
COL6A1-206ENST00000498614 KRTAP10-2P60368 255 aa9.65□□□□□ -0.86
COL6A1-206ENST00000498614 KTN1-AS1Q86SY8 53 aa9.65□□□□□ -0.86
COL6A1-206ENST00000498614 IGLV7-43P04211 117 aa9.64□□□□□ -0.87
COL6A1-206ENST00000498614 A6NN06 94 aa9.64□□□□□ -0.87
COL6A1-206ENST00000498614 SPINK7P58062 85 aa9.63□□□□□ -0.87
COL6A1-206ENST00000498614 Q5W150 140 aa9.63□□□□□ -0.87
COL6A1-206ENST00000498614 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
COL6A1-206ENST00000498614 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
COL6A1-206ENST00000498614 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
COL6A1-206ENST00000498614 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
COL6A1-206ENST00000498614 RBM12B-AS1Q9P1G2 102 aa9.52□□□□□ -0.88
COL6A1-206ENST00000498614 LRP1BQ9NZR2 4599 aa9.5□□□□□ -0.89
COL6A1-206ENST00000498614 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
COL6A1-206ENST00000498614 ACYP2P14621 99 aa9.47□□□□□ -0.89
COL6A1-206ENST00000498614 SSBP3-AS1Q7Z2R9 100 aa9.47□□□□□ -0.89
COL6A1-206ENST00000498614 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.9
COL6A1-206ENST00000498614 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
COL6A1-206ENST00000498614 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
COL6A1-206ENST00000498614 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
COL6A1-206ENST00000498614 RETNLBQ9BQ08 111 aa9.43□□□□□ -0.9
COL6A1-206ENST00000498614 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
COL6A1-206ENST00000498614 Q6ZSA8 131 aa9.42□□□□□ -0.9
COL6A1-206ENST00000498614 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
COL6A1-206ENST00000498614 LINC00313P59037 77 aa9.38□□□□□ -0.91
COL6A1-206ENST00000498614 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
COL6A1-206ENST00000498614 EPPK1P58107 5090 aaKnown RBP9.35□□□□□ -0.91
COL6A1-206ENST00000498614 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
COL6A1-206ENST00000498614 APOBP04114 4563 aaKnown RBP9.34□□□□□ -0.91
COL6A1-206ENST00000498614 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
COL6A1-206ENST00000498614 A0A1B0GU69 56 aa9.32□□□□□ -0.92
COL6A1-206ENST00000498614 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
COL6A1-206ENST00000498614 FAT1Q14517 4588 aa9.3□□□□□ -0.92
COL6A1-206ENST00000498614 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
COL6A1-206ENST00000498614 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
COL6A1-206ENST00000498614 PRAC1Q96KF2 57 aa9.26□□□□□ -0.93
COL6A1-206ENST00000498614 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
COL6A1-206ENST00000498614 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
COL6A1-206ENST00000498614 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
COL6A1-206ENST00000498614 IGKV2D-30A0A075B6S6 120 aa9.22□□□□□ -0.93
COL6A1-206ENST00000498614 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.94
COL6A1-206ENST00000498614 HSPG2P98160 4391 aa9.2□□□□□ -0.94
COL6A1-206ENST00000498614 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
COL6A1-206ENST00000498614 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
COL6A1-206ENST00000498614 UQCR11O14957 56 aa9.16□□□□□ -0.94
COL6A1-206ENST00000498614 SPINK1P00995 79 aa9.12□□□□□ -0.95
COL6A1-206ENST00000498614 RYR1P21817 5038 aa9.11□□□□□ -0.95
COL6A1-206ENST00000498614 KRTAP17-1Q9BYP8 105 aa9.09□□□□□ -0.95
COL6A1-206ENST00000498614 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
COL6A1-206ENST00000498614 Q8N1X5 172 aa9.04□□□□□ -0.96
COL6A1-206ENST00000498614 J3QL48 77 aa9.04□□□□□ -0.96
COL6A1-206ENST00000498614 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.96
COL6A1-206ENST00000498614 Q5VSD8 79 aa8.99□□□□□ -0.97
COL6A1-206ENST00000498614 LINC01554Q52M75 96 aa8.98□□□□□ -0.97
COL6A1-206ENST00000498614 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
COL6A1-206ENST00000498614 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
COL6A1-206ENST00000498614 CSAG1Q6PB30 78 aa8.93□□□□□ -0.98
COL6A1-206ENST00000498614 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
COL6A1-206ENST00000498614 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
COL6A1-206ENST00000498614 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.98
COL6A1-206ENST00000498614 MYCBP2O75592 4640 aa8.9□□□□□ -0.98
COL6A1-206ENST00000498614 BIRC6Q9NR09 4857 aa8.9□□□□□ -0.99
COL6A1-206ENST00000498614 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms