RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 H7BZZ5 65 aa2.68□□□□□ -1.98
BRCA1-224ENST00000497488 COX6CP09669 75 aa2.68□□□□□ -1.98
BRCA1-224ENST00000497488 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
BRCA1-224ENST00000497488 SERF2P84101 59 aa2.68□□□□□ -1.98
BRCA1-224ENST00000497488 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
BRCA1-224ENST00000497488 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
BRCA1-224ENST00000497488 TRGV1A0A0A0MS02 117 aa2.67□□□□□ -1.98
BRCA1-224ENST00000497488 CTXND1A0A1B0GTU2 59 aa2.67□□□□□ -1.98
BRCA1-224ENST00000497488 SPINK4O60575 86 aa2.67□□□□□ -1.98
BRCA1-224ENST00000497488 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
BRCA1-224ENST00000497488 V9GYV3 84 aa2.67□□□□□ -1.98
BRCA1-224ENST00000497488 RYR1P21817 5038 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 A0A096LPF7 62 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 SFTA3P0C7M3 94 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 SPAG11BQ08648 103 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 SPAG11AQ6PDA7 123 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 Q86TA4 180 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 NXT2Q9NPJ8 142 aaKnown RBP2.66□□□□□ -1.98
BRCA1-224ENST00000497488 TMEM167BQ9NRX6 74 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 ARL2-SNX15V9GYD0 113 aa2.66□□□□□ -1.98
BRCA1-224ENST00000497488 TRAV21A0A0B4J279 112 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 KANTRA0A1W2PQU2 76 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 CRIP1P50238 77 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 SFTA2Q6UW10 78 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 Q6ZQY7 126 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 UBE2DNLQ8IWF7 75 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
BRCA1-224ENST00000497488 PKD1P98161 4303 aa2.64□□□□□ -1.99
BRCA1-224ENST00000497488 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
BRCA1-224ENST00000497488 HECTD4Q9Y4D8 3996 aa2.64□□□□□ -1.99
BRCA1-224ENST00000497488 ABCA13Q86UQ4 5058 aa2.64□□□□□ -1.99
BRCA1-224ENST00000497488 PKHD1P08F94 4074 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-224ENST00000497488 UMAD1C9J7I0 102 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 H3BNG1 76 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 CCL18P55774 89 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 GNG13Q9P2W3 67 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 PRO0255Q9UI72 69 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 LRP1BQ9NZR2 4599 aa2.63□□□□□ -1.99
BRCA1-224ENST00000497488 DNAH5Q8TE73 4624 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 APOBP04114 4563 aaKnown RBP2.62□□□□□ -1.99
BRCA1-224ENST00000497488 TRBV6-1A0A0K0K1D8 114 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 A0A1W2PPM0 123 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 H3BVH4 76 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 CFAP126Q5VTH2 177 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 WFDC10BQ8IUB3 73 aa2.62□□□□□ -1.99
BRCA1-224ENST00000497488 ARMS2P0C7Q2 107 aa2.61□□□□□ -1.99
BRCA1-224ENST00000497488 TMEM170BQ5T4T1 132 aa2.61□□□□□ -1.99
BRCA1-224ENST00000497488 BAGE2Q86Y30 109 aa2.61□□□□□ -1.99
BRCA1-224ENST00000497488 HIGD1BQ9P298 99 aa2.61□□□□□ -1.99
BRCA1-224ENST00000497488 HSPG2P98160 4391 aa2.6□□□□□ -1.99
BRCA1-224ENST00000497488 TRBV25-1A0A075B6N4 114 aa2.59□□□□□ -1.99
BRCA1-224ENST00000497488 Q96NJ1 140 aa2.59□□□□□ -1.99
BRCA1-224ENST00000497488 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
BRCA1-224ENST00000497488 PMCHL1Q16048 86 aa2.58□□□□□ -2
BRCA1-224ENST00000497488 AMELXQ99217 191 aa2.58□□□□□ -2
BRCA1-224ENST00000497488 F8VRH5 84 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 BCE1O60756 84 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 WFDC2Q14508 124 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 LINC01556Q5JQF7 62 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 LELP1Q5T871 98 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 SPCS1Q9Y6A9 102 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 FAT1Q14517 4588 aa2.57□□□□□ -2
BRCA1-224ENST00000497488 MGPP08493 103 aa2.56□□□□□ -2
BRCA1-224ENST00000497488 ETDBQ3ZM63 59 aa2.56□□□□□ -2
BRCA1-224ENST00000497488 DEFB104AQ8WTQ1 72 aa2.56□□□□□ -2
BRCA1-224ENST00000497488 TRBV30A0A0K0K1B3 111 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 M0QY20 66 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 ADIRFQ15847 76 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 BAGE3Q86Y29 109 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 CNFNQ9BYD5 112 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 ST20Q9HBF5 79 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 LINC01558Q9Y6Z2 57 aa2.55□□□□□ -2
BRCA1-224ENST00000497488 A0A087WWC5 75 aa2.54□□□□□ -2
BRCA1-224ENST00000497488 F2Z2F3 143 aa2.54□□□□□ -2
BRCA1-224ENST00000497488 NCR3O14931 201 aa2.54□□□□□ -2
BRCA1-224ENST00000497488 HAMPP81172 84 aa2.54□□□□□ -2
BRCA1-224ENST00000497488 CLPSL2Q6UWE3 100 aa2.54□□□□□ -2
BRCA1-224ENST00000497488 ENHOQ6UWT2 76 aa2.54□□□□□ -2
BRCA1-224ENST00000497488 RPL39LQ96EH5 51 aaKnown RBP2.54□□□□□ -2
BRCA1-224ENST00000497488 ANGP03950 147 aaKnown RBP2.52□□□□□ -2.01
BRCA1-224ENST00000497488 LINC00575Q6W349 94 aa2.52□□□□□ -2.01
BRCA1-224ENST00000497488 A0A1B0GUT8 65 aa2.51□□□□□ -2.01
BRCA1-224ENST00000497488 SMIM27A0A1W2PRY6 76 aa2.51□□□□□ -2.01
BRCA1-224ENST00000497488 ZNF815PA8K554 130 aa2.51□□□□□ -2.01
BRCA1-224ENST00000497488 UQCR11O14957 56 aa2.51□□□□□ -2.01
BRCA1-224ENST00000497488 SMR3BP02814 79 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-224ENST00000497488 LINC01600Q96MT4 127 aa2.5□□□□□ -2.01
BRCA1-224ENST00000497488 ACYP2P14621 99 aa2.49□□□□□ -2.01
BRCA1-224ENST00000497488 POLR2KP53803 58 aaKnown RBP2.49□□□□□ -2.01
BRCA1-224ENST00000497488 Q6ZSA8 131 aa2.49□□□□□ -2.01
BRCA1-224ENST00000497488 HERC1Q15751 4861 aa2.49□□□□□ -2.01
BRCA1-224ENST00000497488 D6R8Y8 96 aa2.48□□□□□ -2.01
BRCA1-224ENST00000497488 I3L3M4 83 aa2.48□□□□□ -2.01
BRCA1-224ENST00000497488 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms