RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 QSER1Q2KHR3 1735 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 ATP7BP35670 1465 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 A0A1B0GUT8 65 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 IQCF6A8MYZ5 107 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 NDUFA3O95167 84 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 HMGN2P05204 90 aaKnown RBP-0.67□□□□□ -2.52
PHC3-216ENST00000497171 WT1-ASQ06250 92 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 PLGLAQ15195 96 aa-0.67□□□□□ -2.52
PHC3-216ENST00000497171 LRRC7Q96NW7 1537 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 CYB5AP00167 134 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 GYPAP02724 150 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 PKIAP61925 76 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 GAFA1Q96PS6 74 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 SNHG12Q9BXW3 62 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 ANKRD26Q9UPS8 1709 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 UNC80Q8N2C7 3258 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 RGPD8O14715 1765 aaPredicted RBP-0.68□□□□□ -2.52
PHC3-216ENST00000497171 AKAP12Q02952 1782 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 RGPD5Q99666 1765 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 DEPDC5O75140 1603 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 LRRC9Q6ZRR7 1453 aa-0.68□□□□□ -2.52
PHC3-216ENST00000497171 PREX1Q8TCU6 1659 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 PLIN4Q96Q06 1357 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 S100A8P05109 93 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 DEFB130BP0DP73 79 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 DEFB130AP0DP74 79 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 IAPPP10997 89 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 LEAP2Q969E1 77 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 C20orf78Q9BR46 151 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 DCHS1Q96JQ0 3298 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 DNAH14Q0VDD8 3507 aa-0.69□□□□□ -2.52
PHC3-216ENST00000497171 THOC2Q8NI27 1593 aaKnown RBP-0.7□□□□□ -2.52
PHC3-216ENST00000497171 EEA1Q15075 1411 aa-0.7□□□□□ -2.52
PHC3-216ENST00000497171 VCANP13611 3396 aa-0.7□□□□□ -2.52
PHC3-216ENST00000497171 DEFB131BA0A096LNP1 70 aa-0.7□□□□□ -2.52
PHC3-216ENST00000497171 ERVK-7P63135 1459 aa-0.7□□□□□ -2.52
PHC3-216ENST00000497171 CD163L1Q9NR16 1453 aa-0.7□□□□□ -2.52
PHC3-216ENST00000497171 USP34Q70CQ2 3546 aa-0.7□□□□□ -2.52
PHC3-216ENST00000497171 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.7□□□□□ -2.52
PHC3-216ENST00000497171 CD52P31358 61 aa-0.71□□□□□ -2.52
PHC3-216ENST00000497171 IFI27P40305 119 aaPredicted RBP-0.71□□□□□ -2.52
PHC3-216ENST00000497171 PLXNC1O60486 1568 aa-0.71□□□□□ -2.52
PHC3-216ENST00000497171 TMEM131LA2VDJ0 1609 aa-0.71□□□□□ -2.52
PHC3-216ENST00000497171 VPS8Q8N3P4 1428 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 NCOA2Q15596 1464 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 WFDC9Q8NEX5 89 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 ABRACLQ9P1F3 81 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 DNMBPQ6XZF7 1577 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 DNAH12Q6ZR08 3092 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 MYO3AQ8NEV4 1616 aa-0.72□□□□□ -2.52
PHC3-216ENST00000497171 CCNB3Q8WWL7 1395 aa-0.72□□□□□ -2.53
PHC3-216ENST00000497171 TIAM2Q8IVF5 1701 aa-0.72□□□□□ -2.53
PHC3-216ENST00000497171 CCDC88BA6NC98 1476 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 CFAP47Q6ZTR5 3102 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 MAST1Q9Y2H9 1570 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 TTTY10Q9BZA0 68 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 Q9H521 79 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 WIZO95785 1651 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 CENPFP49454 3210 aa-0.73□□□□□ -2.53
PHC3-216ENST00000497171 RGPD1P0DJD0 1748 aa-0.74□□□□□ -2.53
PHC3-216ENST00000497171 MINOS1Q5TGZ0 78 aa-0.74□□□□□ -2.53
PHC3-216ENST00000497171 NEXMIFQ5QGS0 1516 aa-0.74□□□□□ -2.53
PHC3-216ENST00000497171 C4AP0C0L4 1744 aa-0.75□□□□□ -2.53
PHC3-216ENST00000497171 C4BP0C0L5 1744 aa-0.75□□□□□ -2.53
PHC3-216ENST00000497171 UBL5Q9BZL1 73 aa-0.75□□□□□ -2.53
PHC3-216ENST00000497171 SMARCA2P51531 1590 aa-0.75□□□□□ -2.53
PHC3-216ENST00000497171 SUPT6HQ7KZ85 1726 aaKnown RBP-0.75□□□□□ -2.53
PHC3-216ENST00000497171 RGPD4Q7Z3J3 1758 aa-0.75□□□□□ -2.53
PHC3-216ENST00000497171 SFTA3P0C7M3 94 aa-0.76□□□□□ -2.53
PHC3-216ENST00000497171 C6orf48Q9UBA6 75 aa-0.76□□□□□ -2.53
PHC3-216ENST00000497171 UBR1Q8IWV7 1749 aa-0.76□□□□□ -2.53
PHC3-216ENST00000497171 RGPD3A6NKT7 1758 aaPredicted RBP-0.77□□□□□ -2.53
PHC3-216ENST00000497171 POLR1AO95602 1720 aaPredicted RBP-0.77□□□□□ -2.53
PHC3-216ENST00000497171 TOGARAM1Q9Y4F4 1720 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.77□□□□□ -2.53
PHC3-216ENST00000497171 KIAA0586Q9BVV6 1533 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 CEP162Q5TB80 1403 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 TRAV21A0A0B4J279 112 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 MYMXA0A1B0GTQ4 84 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 UMAD1C9J7I0 102 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 RPS27P42677 84 aaKnown RBP-0.77□□□□□ -2.53
PHC3-216ENST00000497171 DEFB131AP59861 70 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 RPS27LQ71UM5 84 aaKnown RBP-0.77□□□□□ -2.53
PHC3-216ENST00000497171 CDH23Q9H251 3354 aa-0.77□□□□□ -2.53
PHC3-216ENST00000497171 ASXL1Q8IXJ9 1541 aa-0.78□□□□□ -2.53
PHC3-216ENST00000497171 MED14O60244 1454 aa-0.78□□□□□ -2.53
PHC3-216ENST00000497171 SMIM27A0A1W2PRY6 76 aa-0.78□□□□□ -2.53
PHC3-216ENST00000497171 FCER1GP30273 86 aa-0.78□□□□□ -2.53
PHC3-216ENST00000497171 KCNQ1DNQ9H478 68 aa-0.78□□□□□ -2.53
PHC3-216ENST00000497171 ASPMQ8IZT6 3477 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 HFM1A2PYH4 1435 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 PVALEFA0A1B0GWK0 134 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 DEFB114Q30KQ6 69 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 S100ZQ8WXG8 99 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 PIK3C2BO00750 1634 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 BRCA2P51587 3418 aa-0.79□□□□□ -2.54
PHC3-216ENST00000497171 VPS13AQ96RL7 3174 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 ZNF831Q5JPB2 1677 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 ETDCA0A1B0GVM5 59 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 K7EMI3 77 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms