RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 SS18L2Q9UHA2 77 aa1.71□□□□□ -2.14
MDM2-220ENST00000496959 TRAV13-2A0A0B4J235 113 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 DPM2O94777 84 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 DEFB105AQ8NG35 78 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 CLEC2BQ92478 149 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
MDM2-220ENST00000496959 TRBV7-7A0A0K0K1E9 115 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 TMEM218A2RU14 115 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 LST1O00453 97 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 LEPROTL1O95214 131 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 IGKCP01834 107 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 CLLU1Q5K131 121 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 SOSTDC1Q6X4U4 206 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 PPDPFLQ8WWR9 84 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 Q96NJ1 140 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 C20orf166-AS1Q96NR2 134 aa1.69□□□□□ -2.14
MDM2-220ENST00000496959 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
MDM2-220ENST00000496959 USH2AO75445 5202 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 MT2AP02795 61 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 TSPEAR-AS2P59090 65 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 NDUFA5Q16718 116 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 PRO0628Q9UI54 55 aa1.68□□□□□ -2.14
MDM2-220ENST00000496959 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
MDM2-220ENST00000496959 A8MWP4 228 aa1.67□□□□□ -2.14
MDM2-220ENST00000496959 SNCGO76070 127 aa1.67□□□□□ -2.14
MDM2-220ENST00000496959 IFITM1P13164 125 aa1.67□□□□□ -2.14
MDM2-220ENST00000496959 PSMB2P49721 201 aa1.67□□□□□ -2.14
MDM2-220ENST00000496959 NPC2P61916 151 aa1.67□□□□□ -2.14
MDM2-220ENST00000496959 MT1FP04733 61 aa1.66□□□□□ -2.14
MDM2-220ENST00000496959 SCGB1D4Q6XE38 83 aa1.66□□□□□ -2.14
MDM2-220ENST00000496959 SVBPQ8N300 66 aa1.66□□□□□ -2.14
MDM2-220ENST00000496959 A0A0G2JQZ4 141 aa1.65□□□□□ -2.15
MDM2-220ENST00000496959 OCIAD2Q56VL3 154 aa1.65□□□□□ -2.15
MDM2-220ENST00000496959 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.65□□□□□ -2.15
MDM2-220ENST00000496959 hADV29S1A0JD25 119 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 C3orf79P0CE67 100 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 BVES-AS1Q5T3Y7 98 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 Q6ZQY7 126 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 TEN1Q86WV5 123 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 C12orf57Q99622 126 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 SNHG12Q9BXW3 62 aa1.64□□□□□ -2.15
MDM2-220ENST00000496959 SYNE2Q8WXH0 6885 aaKnown RBP1.64□□□□□ -2.15
MDM2-220ENST00000496959 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
MDM2-220ENST00000496959 TRGC2P03986 189 aa1.63□□□□□ -2.15
MDM2-220ENST00000496959 LINC00313P59037 77 aa1.63□□□□□ -2.15
MDM2-220ENST00000496959 LINC00575Q6W349 94 aa1.63□□□□□ -2.15
MDM2-220ENST00000496959 SMIM11BQ8TCY0 68 aa1.63□□□□□ -2.15
MDM2-220ENST00000496959 DSCR8Q96T75 97 aa1.63□□□□□ -2.15
MDM2-220ENST00000496959 SIGMAR1Q99720 223 aa1.63□□□□□ -2.15
MDM2-220ENST00000496959 C8orf87E5RJ46 101 aa1.62□□□□□ -2.15
MDM2-220ENST00000496959 SYS1-DBNDD2H3BUS1 97 aa1.62□□□□□ -2.15
MDM2-220ENST00000496959 APOC3P02656 99 aa1.62□□□□□ -2.15
MDM2-220ENST00000496959 FABP4P15090 132 aa1.62□□□□□ -2.15
MDM2-220ENST00000496959 PMCHL2Q9BQD1 86 aa1.62□□□□□ -2.15
MDM2-220ENST00000496959 A0A087WSZ3 146 aa1.61□□□□□ -2.15
MDM2-220ENST00000496959 H3BQ85 93 aa1.61□□□□□ -2.15
MDM2-220ENST00000496959 LINC01545Q5VT33 79 aa1.61□□□□□ -2.15
MDM2-220ENST00000496959 A0A1B0GX51 115 aa1.6□□□□□ -2.15
MDM2-220ENST00000496959 MUSTN1Q8IVN3 82 aa1.6□□□□□ -2.15
MDM2-220ENST00000496959 RAB37Q96AX2 223 aa1.6□□□□□ -2.15
MDM2-220ENST00000496959 TRBV7-4A0A0J9YYF1 115 aa1.59□□□□□ -2.15
MDM2-220ENST00000496959 A6NN06 94 aa1.59□□□□□ -2.15
MDM2-220ENST00000496959 H0YGX0 51 aa1.59□□□□□ -2.15
MDM2-220ENST00000496959 H3BUT2 72 aa1.59□□□□□ -2.15
MDM2-220ENST00000496959 YPEL4Q96NS1 127 aa1.59□□□□□ -2.15
MDM2-220ENST00000496959 H3BMG7 143 aa1.58□□□□□ -2.16
MDM2-220ENST00000496959 J3KT08 172 aa1.58□□□□□ -2.16
MDM2-220ENST00000496959 SPINK7P58062 85 aa1.58□□□□□ -2.16
MDM2-220ENST00000496959 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
MDM2-220ENST00000496959 NDUFB1O75438 58 aa1.57□□□□□ -2.16
MDM2-220ENST00000496959 TRACP01848 142 aa1.57□□□□□ -2.16
MDM2-220ENST00000496959 KRTDAPP60985 99 aa1.57□□□□□ -2.16
MDM2-220ENST00000496959 LYRM7Q5U5X0 104 aa1.57□□□□□ -2.16
MDM2-220ENST00000496959 TTTY13Q9BZ97 58 aa1.57□□□□□ -2.16
MDM2-220ENST00000496959 NEBP20929 6669 aa1.57□□□□□ -2.16
MDM2-220ENST00000496959 A0A1W2PNM2 257 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 DNAL4O96015 105 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 KRTAP25-1Q3LHN0 102 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 H1FX-AS1Q4G0G2 97 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 Q5VV11 94 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 ANKRD29Q8N6D5 301 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
MDM2-220ENST00000496959 FAM236AA0A1B0GUQ0 79 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 FAM236BA0A1B0GV22 79 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 TMEM256-PLSCR3K7ERE1 68 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 FABP2P12104 132 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 C4orf26Q17RF5 130 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 ANAPC13Q9BS18 74 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
MDM2-220ENST00000496959 A0A0B4J2C4 111 aa1.54□□□□□ -2.16
MDM2-220ENST00000496959 IGKV3D-7A0A0C4DH55 119 aa1.54□□□□□ -2.16
MDM2-220ENST00000496959 A0A1B0GW54 56 aa1.54□□□□□ -2.16
MDM2-220ENST00000496959 HIST1H2BKO60814 126 aa1.54□□□□□ -2.16
MDM2-220ENST00000496959 CCKP06307 115 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms