RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
CDCA7-208ENST00000496441 PSPHP1O15172 72 aa6.81□□□□□ -1.32
CDCA7-208ENST00000496441 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CDCA7-208ENST00000496441 RETNLBQ9BQ08 111 aa6.79□□□□□ -1.32
CDCA7-208ENST00000496441 PKHD1P08F94 4074 aa6.76□□□□□ -1.33
CDCA7-208ENST00000496441 MRPL34Q9BQ48 92 aaKnown RBP6.76□□□□□ -1.33
CDCA7-208ENST00000496441 PKD1P98161 4303 aa6.76□□□□□ -1.33
CDCA7-208ENST00000496441 FAT2Q9NYQ8 4349 aa6.75□□□□□ -1.33
CDCA7-208ENST00000496441 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
CDCA7-208ENST00000496441 CD164Q04900 197 aa6.73□□□□□ -1.33
CDCA7-208ENST00000496441 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
CDCA7-208ENST00000496441 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
CDCA7-208ENST00000496441 Q5W150 140 aa6.72□□□□□ -1.33
CDCA7-208ENST00000496441 TP53AIP1Q9HCN2 124 aa6.71□□□□□ -1.33
CDCA7-208ENST00000496441 H3BPC8 53 aa6.71□□□□□ -1.34
CDCA7-208ENST00000496441 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
CDCA7-208ENST00000496441 A8MUN3 132 aa6.7□□□□□ -1.34
CDCA7-208ENST00000496441 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
CDCA7-208ENST00000496441 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
CDCA7-208ENST00000496441 COA5Q86WW8 74 aa6.68□□□□□ -1.34
CDCA7-208ENST00000496441 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
CDCA7-208ENST00000496441 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
CDCA7-208ENST00000496441 PRO0628Q9UI54 55 aa6.66□□□□□ -1.34
CDCA7-208ENST00000496441 Q6ZSA8 131 aa6.66□□□□□ -1.34
CDCA7-208ENST00000496441 LINC00313P59037 77 aa6.65□□□□□ -1.34
CDCA7-208ENST00000496441 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.35
CDCA7-208ENST00000496441 Q1T7F1 81 aa6.65□□□□□ -1.35
CDCA7-208ENST00000496441 C1orf195Q5TG92 126 aa6.64□□□□□ -1.35
CDCA7-208ENST00000496441 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
CDCA7-208ENST00000496441 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
CDCA7-208ENST00000496441 PRR15LQ9BU68 103 aa6.63□□□□□ -1.35
CDCA7-208ENST00000496441 A8MU10 97 aa6.62□□□□□ -1.35
CDCA7-208ENST00000496441 KRTAP1-4P0C5Y4 121 aa6.62□□□□□ -1.35
CDCA7-208ENST00000496441 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
CDCA7-208ENST00000496441 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
CDCA7-208ENST00000496441 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
CDCA7-208ENST00000496441 CHKB-CPT1BH3BT56 60 aa6.59□□□□□ -1.35
CDCA7-208ENST00000496441 FAT1Q14517 4588 aa6.59□□□□□ -1.36
CDCA7-208ENST00000496441 HRES1P13985 223 aa6.59□□□□□ -1.36
CDCA7-208ENST00000496441 SACSQ9NZJ4 4579 aa6.58□□□□□ -1.36
CDCA7-208ENST00000496441 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
CDCA7-208ENST00000496441 LOC101927531A0A1B0GV80 90 aa6.56□□□□□ -1.36
CDCA7-208ENST00000496441 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
CDCA7-208ENST00000496441 Q5VV11 94 aa6.56□□□□□ -1.36
CDCA7-208ENST00000496441 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
CDCA7-208ENST00000496441 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
CDCA7-208ENST00000496441 V9GYY9 64 aa6.54□□□□□ -1.36
CDCA7-208ENST00000496441 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
CDCA7-208ENST00000496441 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
CDCA7-208ENST00000496441 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
CDCA7-208ENST00000496441 A6NED7 52 aa6.51□□□□□ -1.37
CDCA7-208ENST00000496441 FAM229AH3BQW9 127 aa6.51□□□□□ -1.37
CDCA7-208ENST00000496441 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
CDCA7-208ENST00000496441 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
CDCA7-208ENST00000496441 LINC00304Q8N9R0 145 aa6.49□□□□□ -1.37
CDCA7-208ENST00000496441 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
CDCA7-208ENST00000496441 SPINK1P00995 79 aa6.47□□□□□ -1.37
CDCA7-208ENST00000496441 ACYP2P14621 99 aa6.46□□□□□ -1.38
CDCA7-208ENST00000496441 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
CDCA7-208ENST00000496441 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
CDCA7-208ENST00000496441 SPINK7P58062 85 aa6.42□□□□□ -1.38
CDCA7-208ENST00000496441 LCA10Q71F78 164 aa6.42□□□□□ -1.38
CDCA7-208ENST00000496441 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
CDCA7-208ENST00000496441 Q8N1X5 172 aa6.41□□□□□ -1.38
CDCA7-208ENST00000496441 Q75L30 129 aa6.4□□□□□ -1.38
CDCA7-208ENST00000496441 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.38
CDCA7-208ENST00000496441 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.38
CDCA7-208ENST00000496441 PMAIP1Q13794 54 aa6.4□□□□□ -1.39
CDCA7-208ENST00000496441 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
CDCA7-208ENST00000496441 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
CDCA7-208ENST00000496441 LRP1Q07954 4544 aaKnown RBP6.37□□□□□ -1.39
CDCA7-208ENST00000496441 RYR2Q92736 4967 aa6.37□□□□□ -1.39
CDCA7-208ENST00000496441 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
CDCA7-208ENST00000496441 A0A1B0GU69 56 aa6.32□□□□□ -1.4
CDCA7-208ENST00000496441 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
CDCA7-208ENST00000496441 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
CDCA7-208ENST00000496441 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
CDCA7-208ENST00000496441 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
CDCA7-208ENST00000496441 RYR3Q15413 4870 aa6.26□□□□□ -1.41
CDCA7-208ENST00000496441 ATP11AUNQ6ZP68 121 aa6.25□□□□□ -1.41
CDCA7-208ENST00000496441 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
CDCA7-208ENST00000496441 Q5VSD8 79 aa6.21□□□□□ -1.42
CDCA7-208ENST00000496441 KIAA1109Q2LD37 5005 aa6.2□□□□□ -1.42
CDCA7-208ENST00000496441 A8MUU9 505 aa6.19□□□□□ -1.42
CDCA7-208ENST00000496441 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
CDCA7-208ENST00000496441 HSPG2P98160 4391 aa6.17□□□□□ -1.42
CDCA7-208ENST00000496441 A6NN06 94 aa6.16□□□□□ -1.42
CDCA7-208ENST00000496441 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
CDCA7-208ENST00000496441 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
CDCA7-208ENST00000496441 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
CDCA7-208ENST00000496441 UQCR11O14957 56 aa6.15□□□□□ -1.43
CDCA7-208ENST00000496441 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.43
CDCA7-208ENST00000496441 SEC61GP60059 68 aa6.13□□□□□ -1.43
CDCA7-208ENST00000496441 TNXBP22105 4242 aa6.13□□□□□ -1.43
CDCA7-208ENST00000496441 KTN1-AS1Q86SY8 53 aa6.12□□□□□ -1.43
CDCA7-208ENST00000496441 RYR1P21817 5038 aa6.09□□□□□ -1.44
CDCA7-208ENST00000496441 KRTAP10-8P60410 259 aa6.07□□□□□ -1.44
CDCA7-208ENST00000496441 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
CDCA7-208ENST00000496441 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
CDCA7-208ENST00000496441 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms