RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 NBPF19A0A087WUL8 3843 aa2.01□□□□□ -2.09
PHC3-215ENST00000495893 PRO2289Q9P1D8 64 aa2.01□□□□□ -2.09
PHC3-215ENST00000495893 AKAP9Q99996 3911 aa2.01□□□□□ -2.09
PHC3-215ENST00000495893 TENM4Q6N022 2769 aa2□□□□□ -2.09
PHC3-215ENST00000495893 FLNCQ14315 2725 aa2□□□□□ -2.09
PHC3-215ENST00000495893 NBEAL2Q6ZNJ1 2754 aa2□□□□□ -2.09
PHC3-215ENST00000495893 KRTAP23-1A1A580 65 aa1.99□□□□□ -2.09
PHC3-215ENST00000495893 MKI67P46013 3256 aaKnown RBP1.99□□□□□ -2.09
PHC3-215ENST00000495893 VPS13CQ709C8 3753 aa1.99□□□□□ -2.09
PHC3-215ENST00000495893 RANBP2P49792 3224 aaKnown RBP1.98□□□□□ -2.09
PHC3-215ENST00000495893 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
PHC3-215ENST00000495893 DNAH14Q0VDD8 3507 aa1.98□□□□□ -2.09
PHC3-215ENST00000495893 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
PHC3-215ENST00000495893 LRBAP50851 2863 aa1.98□□□□□ -2.09
PHC3-215ENST00000495893 KRTAP7-1Q8IUC3 87 aa1.97□□□□□ -2.09
PHC3-215ENST00000495893 KRTAP15-1Q3LI76 137 aa1.96□□□□□ -2.1
PHC3-215ENST00000495893 ZFHX4Q86UP3 3567 aa1.96□□□□□ -2.1
PHC3-215ENST00000495893 ZFHX3Q15911 3703 aa1.95□□□□□ -2.1
PHC3-215ENST00000495893 TGP01266 2768 aa1.95□□□□□ -2.1
PHC3-215ENST00000495893 TENM3Q9P273 2699 aa1.95□□□□□ -2.1
PHC3-215ENST00000495893 EYSQ5T1H1 3165 aa1.95□□□□□ -2.1
PHC3-215ENST00000495893 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
PHC3-215ENST00000495893 DNHD1Q96M86 4753 aa1.93□□□□□ -2.1
PHC3-215ENST00000495893 OTOGQ6ZRI0 2925 aa1.93□□□□□ -2.1
PHC3-215ENST00000495893 FBN2P35556 2912 aa1.92□□□□□ -2.1
PHC3-215ENST00000495893 BSNQ9UPA5 3926 aa1.92□□□□□ -2.1
PHC3-215ENST00000495893 PDZD2O15018 2839 aa1.92□□□□□ -2.1
PHC3-215ENST00000495893 SRRM2Q9UQ35 2752 aaKnown RBP1.92□□□□□ -2.1
PHC3-215ENST00000495893 C5orf42Q9H799 3197 aa1.91□□□□□ -2.1
PHC3-215ENST00000495893 WDFY3Q8IZQ1 3526 aa1.91□□□□□ -2.1
PHC3-215ENST00000495893 KRTAP13-3Q3SY46 172 aa1.9□□□□□ -2.1
PHC3-215ENST00000495893 SPEGQ15772 3267 aa1.9□□□□□ -2.1
PHC3-215ENST00000495893 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
PHC3-215ENST00000495893 MXRA5Q9NR99 2828 aa1.9□□□□□ -2.11
PHC3-215ENST00000495893 MGAQ8IWI9 3026 aa1.9□□□□□ -2.11
PHC3-215ENST00000495893 XP32Q5T750 250 aa1.89□□□□□ -2.11
PHC3-215ENST00000495893 ANK2Q01484 3957 aa1.89□□□□□ -2.11
PHC3-215ENST00000495893 ZNF469Q96JG9 3925 aaPredicted RBP1.88□□□□□ -2.11
PHC3-215ENST00000495893 DNAH12Q6ZR08 3092 aa1.88□□□□□ -2.11
PHC3-215ENST00000495893 KRTAP1-4P0C5Y4 121 aa1.88□□□□□ -2.11
PHC3-215ENST00000495893 CFAP54Q96N23 3096 aa1.87□□□□□ -2.11
PHC3-215ENST00000495893 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
PHC3-215ENST00000495893 KRTAP19-4Q3LI73 84 aa1.87□□□□□ -2.11
PHC3-215ENST00000495893 KALRNO60229 2985 aa1.87□□□□□ -2.11
PHC3-215ENST00000495893 NIPBLQ6KC79 2804 aaeCLIP1.87□□□□□ -2.11
PHC3-215ENST00000495893 ASPMQ8IZT6 3477 aa1.87□□□□□ -2.11
PHC3-215ENST00000495893 REV3LO60673 3130 aa1.86□□□□□ -2.11
PHC3-215ENST00000495893 TENM1Q9UKZ4 2725 aa1.86□□□□□ -2.11
PHC3-215ENST00000495893 TRIOO75962 3097 aa1.85□□□□□ -2.11
PHC3-215ENST00000495893 NF1P21359 2839 aa1.85□□□□□ -2.11
PHC3-215ENST00000495893 CSMD3Q7Z407 3707 aa1.85□□□□□ -2.11
PHC3-215ENST00000495893 A0A0C4DFX4 3053 aa1.84□□□□□ -2.11
PHC3-215ENST00000495893 CELSR3Q9NYQ7 3312 aa1.84□□□□□ -2.12
PHC3-215ENST00000495893 TRRAPQ9Y4A5 3859 aa1.83□□□□□ -2.12
PHC3-215ENST00000495893 NBEAQ8NFP9 2946 aa1.83□□□□□ -2.12
PHC3-215ENST00000495893 DCHS1Q96JQ0 3298 aa1.82□□□□□ -2.12
PHC3-215ENST00000495893 PRUNE2Q8WUY3 3088 aa1.82□□□□□ -2.12
PHC3-215ENST00000495893 FRYQ5TBA9 3013 aa1.81□□□□□ -2.12
PHC3-215ENST00000495893 FRYLO94915 3013 aa1.81□□□□□ -2.12
PHC3-215ENST00000495893 ALMS1Q8TCU4 4167 aa1.8□□□□□ -2.12
PHC3-215ENST00000495893 COL6A3P12111 3177 aa1.8□□□□□ -2.12
PHC3-215ENST00000495893 DMXL1Q9Y485 3027 aa1.79□□□□□ -2.12
PHC3-215ENST00000495893 COL12A1Q99715 3063 aa1.79□□□□□ -2.12
PHC3-215ENST00000495893 LAMA2P24043 3122 aaKnown RBP1.78□□□□□ -2.12
PHC3-215ENST00000495893 DMXL2Q8TDJ6 3036 aa1.78□□□□□ -2.12
PHC3-215ENST00000495893 ATMQ13315 3056 aa1.78□□□□□ -2.12
PHC3-215ENST00000495893 HRNRQ86YZ3 2850 aaPredicted RBP1.78□□□□□ -2.13
PHC3-215ENST00000495893 RELNP78509 3460 aa1.77□□□□□ -2.13
PHC3-215ENST00000495893 FREM2Q5SZK8 3169 aa1.77□□□□□ -2.13
PHC3-215ENST00000495893 KRTAP10-6P60371 365 aaPredicted RBP1.77□□□□□ -2.13
PHC3-215ENST00000495893 MUC3AQ02505 3323 aa1.76□□□□□ -2.13
PHC3-215ENST00000495893 MT1HL1P0DM35 61 aa1.76□□□□□ -2.13
PHC3-215ENST00000495893 CRYBG3Q68DQ2 2970 aa1.76□□□□□ -2.13
PHC3-215ENST00000495893 TENM2Q9NT68 2774 aa1.75□□□□□ -2.13
PHC3-215ENST00000495893 CELSR2Q9HCU4 2923 aa1.75□□□□□ -2.13
PHC3-215ENST00000495893 MEGF8Q7Z7M0 2845 aa1.75□□□□□ -2.13
PHC3-215ENST00000495893 BIRC6Q9NR09 4857 aa1.75□□□□□ -2.13
PHC3-215ENST00000495893 MT3P25713 68 aa1.74□□□□□ -2.13
PHC3-215ENST00000495893 RYR3Q15413 4870 aa1.74□□□□□ -2.13
PHC3-215ENST00000495893 KRTAP3-1Q9BYR8 98 aa1.74□□□□□ -2.13
PHC3-215ENST00000495893 PKD1L1Q8TDX9 2849 aa1.74□□□□□ -2.13
PHC3-215ENST00000495893 KRTAP10-4P60372 401 aaPredicted RBP1.73□□□□□ -2.13
PHC3-215ENST00000495893 CUBNO60494 3623 aa1.73□□□□□ -2.13
PHC3-215ENST00000495893 FBN1P35555 2871 aaKnown RBP1.73□□□□□ -2.13
PHC3-215ENST00000495893 BOD1L1Q8NFC6 3051 aa1.73□□□□□ -2.13
PHC3-215ENST00000495893 CSMD1Q96PZ7 3565 aa1.73□□□□□ -2.13
PHC3-215ENST00000495893 LOC400499M0QZD8 3231 aa1.73□□□□□ -2.13
PHC3-215ENST00000495893 TACC2O95359 2948 aa1.72□□□□□ -2.13
PHC3-215ENST00000495893 WDFY4Q6ZS81 3184 aa1.72□□□□□ -2.13
PHC3-215ENST00000495893 KRTAP4-5Q9BYR2 181 aa1.71□□□□□ -2.14
PHC3-215ENST00000495893 LAMA1P25391 3075 aa1.71□□□□□ -2.14
PHC3-215ENST00000495893 DCHS2Q6V1P9 2916 aa1.7□□□□□ -2.14
PHC3-215ENST00000495893 KRTAP10-12P60413 245 aa1.7□□□□□ -2.14
PHC3-215ENST00000495893 VWFP04275 2813 aa1.69□□□□□ -2.14
PHC3-215ENST00000495893 ZZEF1O43149 2961 aa1.68□□□□□ -2.14
PHC3-215ENST00000495893 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
PHC3-215ENST00000495893 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
PHC3-215ENST00000495893 KRTAP3-2Q9BYR7 98 aa1.68□□□□□ -2.14
PHC3-215ENST00000495893 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
PHC3-215ENST00000495893 ADGRG4Q8IZF6 3080 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms