RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 KRTAP29-1A8MX34 341 aaPredicted RBP8.94□□□□□ -0.98
CHTOP-206ENST00000495554 ZNF861PO60384 105 aa8.93□□□□□ -0.98
CHTOP-206ENST00000495554 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
CHTOP-206ENST00000495554 FRAS1Q86XX4 4008 aa8.93□□□□□ -0.98
CHTOP-206ENST00000495554 ZCCHC13Q8WW36 166 aaKnown RBP8.93□□□□□ -0.98
CHTOP-206ENST00000495554 HYDINQ4G0P3 5121 aa8.92□□□□□ -0.98
CHTOP-206ENST00000495554 CASC2Q6XLA1 102 aa8.92□□□□□ -0.98
CHTOP-206ENST00000495554 ALMS1Q8TCU4 4167 aa8.9□□□□□ -0.99
CHTOP-206ENST00000495554 NDUFB1O75438 58 aa8.88□□□□□ -0.99
CHTOP-206ENST00000495554 KRTAP10-2P60368 255 aa8.88□□□□□ -0.99
CHTOP-206ENST00000495554 CYP4F30PQ9H0H9 118 aa8.88□□□□□ -0.99
CHTOP-206ENST00000495554 MOBPQ13875 183 aa8.87□□□□□ -0.99
CHTOP-206ENST00000495554 Q96NJ1 140 aa8.86□□□□□ -0.99
CHTOP-206ENST00000495554 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
CHTOP-206ENST00000495554 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
CHTOP-206ENST00000495554 PKD1P98161 4303 aa8.85□□□□□ -0.99
CHTOP-206ENST00000495554 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
CHTOP-206ENST00000495554 ANAPC11Q9NYG5 84 aa8.84□□□□□ -0.99
CHTOP-206ENST00000495554 IGLV7-43P04211 117 aa8.84□□□□□ -0.99
CHTOP-206ENST00000495554 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
CHTOP-206ENST00000495554 LIMD2Q9BT23 127 aa8.83□□□□□ -1
CHTOP-206ENST00000495554 Q75L30 129 aa8.82□□□□□ -1
CHTOP-206ENST00000495554 H3BPC8 53 aa8.81□□□□□ -1
CHTOP-206ENST00000495554 A6NED7 52 aa8.81□□□□□ -1
CHTOP-206ENST00000495554 LINC00208Q96KT6 92 aa8.8□□□□□ -1
CHTOP-206ENST00000495554 H0Y9P7 68 aa8.8□□□□□ -1
CHTOP-206ENST00000495554 CIRBP-AS1Q8TBR5 109 aa8.8□□□□□ -1
CHTOP-206ENST00000495554 PRR15LQ9BU68 103 aa8.78□□□□□ -1
CHTOP-206ENST00000495554 ASB16-AS1Q495Z4 193 aa8.78□□□□□ -1
CHTOP-206ENST00000495554 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
CHTOP-206ENST00000495554 LRP1BQ9NZR2 4599 aa8.77□□□□□ -1
CHTOP-206ENST00000495554 KRTAP10-1P60331 282 aa8.76□□□□□ -1.01
CHTOP-206ENST00000495554 CDK2AP2O75956 126 aa8.76□□□□□ -1.01
CHTOP-206ENST00000495554 C8orf17Q9NRJ1 99 aa8.76□□□□□ -1.01
CHTOP-206ENST00000495554 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
CHTOP-206ENST00000495554 Q6ZSA8 131 aa8.75□□□□□ -1.01
CHTOP-206ENST00000495554 SACSQ9NZJ4 4579 aa8.75□□□□□ -1.01
CHTOP-206ENST00000495554 TP53AIP1Q9HCN2 124 aa8.74□□□□□ -1.01
CHTOP-206ENST00000495554 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
CHTOP-206ENST00000495554 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.01
CHTOP-206ENST00000495554 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.01
CHTOP-206ENST00000495554 PLA2G1BP04054 148 aaKnown RBP8.7□□□□□ -1.02
CHTOP-206ENST00000495554 PRR4Q16378 134 aa8.7□□□□□ -1.02
CHTOP-206ENST00000495554 SPANXA2-OT1Q8N9U9 137 aa8.7□□□□□ -1.02
CHTOP-206ENST00000495554 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
CHTOP-206ENST00000495554 RETNLBQ9BQ08 111 aa8.69□□□□□ -1.02
CHTOP-206ENST00000495554 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
CHTOP-206ENST00000495554 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
CHTOP-206ENST00000495554 A0A087X002 238 aa8.64□□□□□ -1.03
CHTOP-206ENST00000495554 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
CHTOP-206ENST00000495554 VPS13BQ7Z7G8 4022 aa8.63□□□□□ -1.03
CHTOP-206ENST00000495554 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
CHTOP-206ENST00000495554 KRTAP13-2Q52LG2 175 aa8.59□□□□□ -1.03
CHTOP-206ENST00000495554 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
CHTOP-206ENST00000495554 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
CHTOP-206ENST00000495554 DYNC1H1Q14204 4646 aaKnown RBP8.56□□□□□ -1.04
CHTOP-206ENST00000495554 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
CHTOP-206ENST00000495554 RYR2Q92736 4967 aa8.49□□□□□ -1.05
CHTOP-206ENST00000495554 A0A1B0GVY2 172 aa8.49□□□□□ -1.05
CHTOP-206ENST00000495554 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
CHTOP-206ENST00000495554 Q5W150 140 aa8.49□□□□□ -1.05
CHTOP-206ENST00000495554 SPINK7P58062 85 aa8.48□□□□□ -1.05
CHTOP-206ENST00000495554 COA5Q86WW8 74 aa8.47□□□□□ -1.05
CHTOP-206ENST00000495554 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
CHTOP-206ENST00000495554 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
CHTOP-206ENST00000495554 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
CHTOP-206ENST00000495554 ROMO1P60602 79 aa8.44□□□□□ -1.06
CHTOP-206ENST00000495554 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
CHTOP-206ENST00000495554 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
CHTOP-206ENST00000495554 FAT1Q14517 4588 aa8.42□□□□□ -1.06
CHTOP-206ENST00000495554 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
CHTOP-206ENST00000495554 SPINK1P00995 79 aa8.41□□□□□ -1.06
CHTOP-206ENST00000495554 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
CHTOP-206ENST00000495554 KRTAP16-1A8MUX0 517 aa8.38□□□□□ -1.07
CHTOP-206ENST00000495554 HRES1P13985 223 aa8.37□□□□□ -1.07
CHTOP-206ENST00000495554 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
CHTOP-206ENST00000495554 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
CHTOP-206ENST00000495554 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
CHTOP-206ENST00000495554 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
CHTOP-206ENST00000495554 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
CHTOP-206ENST00000495554 ACYP2P14621 99 aa8.29□□□□□ -1.08
CHTOP-206ENST00000495554 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
CHTOP-206ENST00000495554 P0C880 135 aa8.25□□□□□ -1.09
CHTOP-206ENST00000495554 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
CHTOP-206ENST00000495554 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
CHTOP-206ENST00000495554 RYR3Q15413 4870 aa8.23□□□□□ -1.09
CHTOP-206ENST00000495554 IGKV2D-30A0A075B6S6 120 aa8.2□□□□□ -1.1
CHTOP-206ENST00000495554 HSPG2P98160 4391 aa8.15□□□□□ -1.11
CHTOP-206ENST00000495554 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
CHTOP-206ENST00000495554 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
CHTOP-206ENST00000495554 RYR1P21817 5038 aa8.08□□□□□ -1.12
CHTOP-206ENST00000495554 C20orf166-AS1Q96NR2 134 aa8.08□□□□□ -1.12
CHTOP-206ENST00000495554 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
CHTOP-206ENST00000495554 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
CHTOP-206ENST00000495554 A8MUU9 505 aa8.07□□□□□ -1.12
CHTOP-206ENST00000495554 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
CHTOP-206ENST00000495554 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
CHTOP-206ENST00000495554 TNXBP22105 4242 aa8.05□□□□□ -1.12
CHTOP-206ENST00000495554 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
CHTOP-206ENST00000495554 Q5VSD8 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms