RNA–Protein interactions for RNA: ENST00000495183.5

HLA-A-207, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-207ENST00000495183 LINC00313P59037 77 aa13.22□□□□□ -0.29
HLA-A-207ENST00000495183 NDUFB1O75438 58 aa13.21□□□□□ -0.29
HLA-A-207ENST00000495183 SEC61BP60468 96 aaKnown RBP13.21□□□□□ -0.29
HLA-A-207ENST00000495183 NOTCH2NLQ7Z3S9 236 aa13.2□□□□□ -0.3
HLA-A-207ENST00000495183 A8MWP4 228 aa13.2□□□□□ -0.3
HLA-A-207ENST00000495183 UBL5Q9BZL1 73 aa13.19□□□□□ -0.3
HLA-A-207ENST00000495183 BPY2O14599 106 aa13.17□□□□□ -0.3
HLA-A-207ENST00000495183 RPL37P61927 97 aaKnown RBP13.17□□□□□ -0.3
HLA-A-207ENST00000495183 IGKV3D-7A0A0C4DH55 119 aa13.16□□□□□ -0.3
HLA-A-207ENST00000495183 MUC17Q685J3 4493 aa13.15□□□□□ -0.3
HLA-A-207ENST00000495183 C8orf87E5RJ46 101 aa13.15□□□□□ -0.31
HLA-A-207ENST00000495183 Q75L30 129 aa13.12□□□□□ -0.31
HLA-A-207ENST00000495183 PCOTHQ58A44 107 aa13.11□□□□□ -0.31
HLA-A-207ENST00000495183 PRR15Q8IV56 129 aa13.11□□□□□ -0.31
HLA-A-207ENST00000495183 KRTAP16-1A8MUX0 517 aa13.1□□□□□ -0.31
HLA-A-207ENST00000495183 C20orf166-AS1Q96NR2 134 aa13.09□□□□□ -0.31
HLA-A-207ENST00000495183 RNF213Q63HN8 5207 aa13.08□□□□□ -0.32
HLA-A-207ENST00000495183 K7EQZ3 153 aa13.07□□□□□ -0.32
HLA-A-207ENST00000495183 ACYP1P07311 99 aa13.07□□□□□ -0.32
HLA-A-207ENST00000495183 C8orf17Q9NRJ1 99 aa13.07□□□□□ -0.32
HLA-A-207ENST00000495183 A8MUU9 505 aa13.07□□□□□ -0.32
HLA-A-207ENST00000495183 FAM240AA0A1B0GVK7 77 aa13.04□□□□□ -0.32
HLA-A-207ENST00000495183 ATP11AUNQ6ZP68 121 aa13.02□□□□□ -0.32
HLA-A-207ENST00000495183 Q8N9L7 120 aa13.02□□□□□ -0.32
HLA-A-207ENST00000495183 MUC2Q02817 5179 aa13.01□□□□□ -0.33
HLA-A-207ENST00000495183 KRTAP4-1Q9BYQ7 146 aa12.99□□□□□ -0.33
HLA-A-207ENST00000495183 MMP24-AS1A0A0U1RRL7 71 aa12.97□□□□□ -0.33
HLA-A-207ENST00000495183 K7ERU9 68 aa12.94□□□□□ -0.34
HLA-A-207ENST00000495183 CXCL6P80162 114 aa12.94□□□□□ -0.34
HLA-A-207ENST00000495183 hDV103S1A0JD37 113 aa12.91□□□□□ -0.34
HLA-A-207ENST00000495183 J3QR89 54 aa12.91□□□□□ -0.34
HLA-A-207ENST00000495183 Q8N9P0 234 aaPredicted RBP12.9□□□□□ -0.34
HLA-A-207ENST00000495183 TMEM254Q8TBM7 123 aa12.9□□□□□ -0.34
HLA-A-207ENST00000495183 MRPL34Q9BQ48 92 aaKnown RBP12.88□□□□□ -0.35
HLA-A-207ENST00000495183 WFDC13Q8IUB5 93 aa12.86□□□□□ -0.35
HLA-A-207ENST00000495183 CASC2Q6XLA1 102 aa12.84□□□□□ -0.35
HLA-A-207ENST00000495183 ATP5EP2Q5VTU8 51 aa12.81□□□□□ -0.36
HLA-A-207ENST00000495183 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
HLA-A-207ENST00000495183 LINC00643Q86TS7 51 aa12.8□□□□□ -0.36
HLA-A-207ENST00000495183 NDUFS5O43920 106 aa12.79□□□□□ -0.36
HLA-A-207ENST00000495183 ZCCHC13Q8WW36 166 aaKnown RBP12.79□□□□□ -0.36
HLA-A-207ENST00000495183 A0A0U1RQV1 116 aa12.75□□□□□ -0.37
HLA-A-207ENST00000495183 PCP4P48539 62 aa12.73□□□□□ -0.37
HLA-A-207ENST00000495183 HIST1H4AP62805 103 aaKnown RBP12.71□□□□□ -0.38
HLA-A-207ENST00000495183 FAT4Q6V0I7 4981 aa12.6□□□□□ -0.39
HLA-A-207ENST00000495183 Q5W150 140 aa12.58□□□□□ -0.39
HLA-A-207ENST00000495183 A0A087WVE0 104 aa12.58□□□□□ -0.4
HLA-A-207ENST00000495183 SPINK7P58062 85 aa12.57□□□□□ -0.4
HLA-A-207ENST00000495183 KRTAP19-2Q3LHN2 52 aa12.57□□□□□ -0.4
HLA-A-207ENST00000495183 TP53AIP1Q9HCN2 124 aa12.52□□□□□ -0.41
HLA-A-207ENST00000495183 LCE2CQ5TA81 110 aa12.51□□□□□ -0.41
HLA-A-207ENST00000495183 COX6B2Q6YFQ2 88 aa12.5□□□□□ -0.41
HLA-A-207ENST00000495183 SCGB1A1P11684 91 aa12.49□□□□□ -0.41
HLA-A-207ENST00000495183 HRES1P13985 223 aa12.48□□□□□ -0.41
HLA-A-207ENST00000495183 IGKV2D-30A0A075B6S6 120 aa12.44□□□□□ -0.42
HLA-A-207ENST00000495183 IGKV2-30P06310 120 aa12.44□□□□□ -0.42
HLA-A-207ENST00000495183 MT-ATP8P03928 68 aa12.43□□□□□ -0.42
HLA-A-207ENST00000495183 MPLKIPQ8TAP9 179 aa12.41□□□□□ -0.42
HLA-A-207ENST00000495183 RBM12B-AS1Q9P1G2 102 aa12.41□□□□□ -0.42
HLA-A-207ENST00000495183 LCE2AQ5TA79 106 aaPredicted RBP12.4□□□□□ -0.42
HLA-A-207ENST00000495183 C7orf65Q6ZTY9 151 aa12.39□□□□□ -0.43
HLA-A-207ENST00000495183 IMUPQ9GZP8 106 aa12.37□□□□□ -0.43
HLA-A-207ENST00000495183 FAM236DA0A1B0GTK5 79 aa12.35□□□□□ -0.43
HLA-A-207ENST00000495183 FAM236CP0DP71 79 aa12.35□□□□□ -0.43
HLA-A-207ENST00000495183 UQCRQO14949 82 aa12.33□□□□□ -0.44
HLA-A-207ENST00000495183 MT1HP80294 61 aa12.33□□□□□ -0.44
HLA-A-207ENST00000495183 TRAV22A0A0B4J277 110 aa12.32□□□□□ -0.44
HLA-A-207ENST00000495183 OCR1Q9BZK8 76 aa12.27□□□□□ -0.45
HLA-A-207ENST00000495183 H0Y9P7 68 aa12.23□□□□□ -0.45
HLA-A-207ENST00000495183 ATOX1O00244 68 aa12.2□□□□□ -0.46
HLA-A-207ENST00000495183 FLGP20930 4061 aaPredicted RBP12.19□□□□□ -0.46
HLA-A-207ENST00000495183 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
HLA-A-207ENST00000495183 M0R2T5 61 aa12.18□□□□□ -0.46
HLA-A-207ENST00000495183 CYP4F30PQ9H0H9 118 aa12.18□□□□□ -0.46
HLA-A-207ENST00000495183 FAM236AA0A1B0GUQ0 79 aa12.17□□□□□ -0.46
HLA-A-207ENST00000495183 FAM236BA0A1B0GV22 79 aa12.17□□□□□ -0.46
HLA-A-207ENST00000495183 C4orf26Q17RF5 130 aa12.17□□□□□ -0.46
HLA-A-207ENST00000495183 MP68P56378 58 aa12.12□□□□□ -0.47
HLA-A-207ENST00000495183 C5orf47Q569G3 176 aa12.11□□□□□ -0.47
HLA-A-207ENST00000495183 C1orf64Q8NEQ6 169 aa12.11□□□□□ -0.47
HLA-A-207ENST00000495183 LINC00208Q96KT6 92 aa12.1□□□□□ -0.47
HLA-A-207ENST00000495183 H1FX-AS1Q4G0G2 97 aa12.05□□□□□ -0.48
HLA-A-207ENST00000495183 SMIM20Q8N5G0 67 aa12.04□□□□□ -0.48
HLA-A-207ENST00000495183 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
HLA-A-207ENST00000495183 KRTAP10-6P60371 365 aaPredicted RBP12□□□□□ -0.49
HLA-A-207ENST00000495183 H3BPC8 53 aa11.99□□□□□ -0.49
HLA-A-207ENST00000495183 KRTAP3-1Q9BYR8 98 aa11.97□□□□□ -0.49
HLA-A-207ENST00000495183 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.49
HLA-A-207ENST00000495183 LORP23490 312 aaPredicted RBP11.95□□□□□ -0.5
HLA-A-207ENST00000495183 KLKP1Q107X0 134 aa11.94□□□□□ -0.5
HLA-A-207ENST00000495183 SERP2Q8N6R1 65 aa11.82□□□□□ -0.52
HLA-A-207ENST00000495183 S4R3F8 94 aa11.78□□□□□ -0.52
HLA-A-207ENST00000495183 KRTAP9-8Q9BYQ0 159 aa11.75□□□□□ -0.53
HLA-A-207ENST00000495183 SNURFQ9Y675 71 aa11.73□□□□□ -0.53
HLA-A-207ENST00000495183 A8MUN3 132 aa11.72□□□□□ -0.53
HLA-A-207ENST00000495183 LCA10Q71F78 164 aa11.72□□□□□ -0.53
HLA-A-207ENST00000495183 C20orf197Q8N268 126 aa11.7□□□□□ -0.54
HLA-A-207ENST00000495183 CCDC179H3BU77 68 aa11.69□□□□□ -0.54
HLA-A-207ENST00000495183 MT2AP02795 61 aa11.64□□□□□ -0.55
HLA-A-207ENST00000495183 COX7CP15954 63 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms