RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 K7EQZ3 153 aa6.71□□□□□ -1.34
HDLBP-245ENST00000494862 Q96NJ1 140 aa6.71□□□□□ -1.34
HDLBP-245ENST00000494862 A8MWP4 228 aa6.7□□□□□ -1.34
HDLBP-245ENST00000494862 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
HDLBP-245ENST00000494862 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
HDLBP-245ENST00000494862 Q5XG85 94 aa6.68□□□□□ -1.34
HDLBP-245ENST00000494862 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
HDLBP-245ENST00000494862 SMIM20Q8N5G0 67 aa6.67□□□□□ -1.34
HDLBP-245ENST00000494862 NDUFB1O75438 58 aa6.66□□□□□ -1.34
HDLBP-245ENST00000494862 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
HDLBP-245ENST00000494862 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
HDLBP-245ENST00000494862 PRR26Q8N8Z3 221 aa6.66□□□□□ -1.34
HDLBP-245ENST00000494862 HCG22E2RYF7 251 aa6.65□□□□□ -1.34
HDLBP-245ENST00000494862 COX7CP15954 63 aa6.65□□□□□ -1.34
HDLBP-245ENST00000494862 TRAV7A0A075B6U4 112 aa6.64□□□□□ -1.35
HDLBP-245ENST00000494862 LIMD2Q9BT23 127 aa6.64□□□□□ -1.35
HDLBP-245ENST00000494862 KRTAP4-5Q9BYR2 181 aa6.64□□□□□ -1.35
HDLBP-245ENST00000494862 CCDC179H3BU77 68 aa6.63□□□□□ -1.35
HDLBP-245ENST00000494862 UQCRQO14949 82 aa6.63□□□□□ -1.35
HDLBP-245ENST00000494862 SPINK1P00995 79 aa6.63□□□□□ -1.35
HDLBP-245ENST00000494862 Q5VSD8 79 aa6.63□□□□□ -1.35
HDLBP-245ENST00000494862 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
HDLBP-245ENST00000494862 A0A1B0GVX0 72 aa6.61□□□□□ -1.35
HDLBP-245ENST00000494862 LINC00304Q8N9R0 145 aa6.61□□□□□ -1.35
HDLBP-245ENST00000494862 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-245ENST00000494862 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
HDLBP-245ENST00000494862 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
HDLBP-245ENST00000494862 C1orf195Q5TG92 126 aa6.59□□□□□ -1.35
HDLBP-245ENST00000494862 CASC2Q6XLA1 102 aa6.59□□□□□ -1.35
HDLBP-245ENST00000494862 WFDC13Q8IUB5 93 aa6.59□□□□□ -1.35
HDLBP-245ENST00000494862 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
HDLBP-245ENST00000494862 C8orf17Q9NRJ1 99 aa6.58□□□□□ -1.36
HDLBP-245ENST00000494862 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
HDLBP-245ENST00000494862 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
HDLBP-245ENST00000494862 hDV103S1A0JD37 113 aa6.55□□□□□ -1.36
HDLBP-245ENST00000494862 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
HDLBP-245ENST00000494862 Q8N1X5 172 aa6.55□□□□□ -1.36
HDLBP-245ENST00000494862 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
HDLBP-245ENST00000494862 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
HDLBP-245ENST00000494862 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
HDLBP-245ENST00000494862 C20orf197Q8N268 126 aa6.51□□□□□ -1.37
HDLBP-245ENST00000494862 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
HDLBP-245ENST00000494862 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
HDLBP-245ENST00000494862 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
HDLBP-245ENST00000494862 LINC00313P59037 77 aa6.48□□□□□ -1.37
HDLBP-245ENST00000494862 KLKP1Q107X0 134 aa6.48□□□□□ -1.37
HDLBP-245ENST00000494862 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
HDLBP-245ENST00000494862 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
HDLBP-245ENST00000494862 TNXBP22105 4242 aa6.48□□□□□ -1.37
HDLBP-245ENST00000494862 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
HDLBP-245ENST00000494862 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
HDLBP-245ENST00000494862 A0A0U1RQV1 116 aa6.46□□□□□ -1.38
HDLBP-245ENST00000494862 MYCBP2O75592 4640 aa6.46□□□□□ -1.38
HDLBP-245ENST00000494862 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
HDLBP-245ENST00000494862 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
HDLBP-245ENST00000494862 MP68P56378 58 aa6.44□□□□□ -1.38
HDLBP-245ENST00000494862 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
HDLBP-245ENST00000494862 H0Y9P7 68 aa6.43□□□□□ -1.38
HDLBP-245ENST00000494862 NDUFS5O43920 106 aa6.43□□□□□ -1.38
HDLBP-245ENST00000494862 KRTAP16-1A8MUX0 517 aa6.42□□□□□ -1.38
HDLBP-245ENST00000494862 H3BPC8 53 aa6.42□□□□□ -1.38
HDLBP-245ENST00000494862 NDUFC1O43677 76 aa6.42□□□□□ -1.38
HDLBP-245ENST00000494862 ZCCHC13Q8WW36 166 aaKnown RBP6.41□□□□□ -1.38
HDLBP-245ENST00000494862 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
HDLBP-245ENST00000494862 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
HDLBP-245ENST00000494862 TRAV22A0A0B4J277 110 aa6.4□□□□□ -1.38
HDLBP-245ENST00000494862 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
HDLBP-245ENST00000494862 H7BZZ5 65 aa6.39□□□□□ -1.39
HDLBP-245ENST00000494862 OXTP01178 125 aa6.39□□□□□ -1.39
HDLBP-245ENST00000494862 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
HDLBP-245ENST00000494862 TMEM258P61165 79 aa6.39□□□□□ -1.39
HDLBP-245ENST00000494862 LINC00208Q96KT6 92 aa6.38□□□□□ -1.39
HDLBP-245ENST00000494862 RETNLBQ9BQ08 111 aa6.37□□□□□ -1.39
HDLBP-245ENST00000494862 FLG2Q5D862 2391 aaPredicted RBP6.36□□□□□ -1.39
HDLBP-245ENST00000494862 C1orf64Q8NEQ6 169 aa6.35□□□□□ -1.39
HDLBP-245ENST00000494862 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.39
HDLBP-245ENST00000494862 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
HDLBP-245ENST00000494862 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
HDLBP-245ENST00000494862 FP248Q71RG6 208 aaPredicted RBP6.34□□□□□ -1.39
HDLBP-245ENST00000494862 Q5W150 140 aa6.33□□□□□ -1.4
HDLBP-245ENST00000494862 FAM236DA0A1B0GTK5 79 aa6.32□□□□□ -1.4
HDLBP-245ENST00000494862 FAM236CP0DP71 79 aa6.32□□□□□ -1.4
HDLBP-245ENST00000494862 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
HDLBP-245ENST00000494862 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
HDLBP-245ENST00000494862 C9orf92A6NGG3 77 aa6.3□□□□□ -1.4
HDLBP-245ENST00000494862 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
HDLBP-245ENST00000494862 A8MUU9 505 aa6.29□□□□□ -1.4
HDLBP-245ENST00000494862 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
HDLBP-245ENST00000494862 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
HDLBP-245ENST00000494862 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
HDLBP-245ENST00000494862 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
HDLBP-245ENST00000494862 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
HDLBP-245ENST00000494862 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
HDLBP-245ENST00000494862 Q75L30 129 aa6.23□□□□□ -1.41
HDLBP-245ENST00000494862 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
HDLBP-245ENST00000494862 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
HDLBP-245ENST00000494862 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
HDLBP-245ENST00000494862 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
HDLBP-245ENST00000494862 PRR4Q16378 134 aa6.19□□□□□ -1.42
HDLBP-245ENST00000494862 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms