RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LINC00313P59037 77 aa5.94□□□□□ -1.46
APTX-230ENST00000494649 ETDBQ3ZM63 59 aa5.94□□□□□ -1.46
APTX-230ENST00000494649 F8W1H4 67 aa5.93□□□□□ -1.46
APTX-230ENST00000494649 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
APTX-230ENST00000494649 C21orf62-AS1Q17RA5 79 aa5.92□□□□□ -1.46
APTX-230ENST00000494649 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
APTX-230ENST00000494649 A0A1B0GW54 56 aa5.91□□□□□ -1.46
APTX-230ENST00000494649 J3KT08 172 aa5.9□□□□□ -1.46
APTX-230ENST00000494649 Q75L30 129 aa5.9□□□□□ -1.46
APTX-230ENST00000494649 KRTAP16-1A8MUX0 517 aa5.9□□□□□ -1.47
APTX-230ENST00000494649 IGKV3D-7A0A0C4DH55 119 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 A8MWP4 228 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 NDUFB1O75438 58 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 Q6ZVQ6 151 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
APTX-230ENST00000494649 A0A0U1RQV1 116 aa5.88□□□□□ -1.47
APTX-230ENST00000494649 A8MUU9 505 aa5.87□□□□□ -1.47
APTX-230ENST00000494649 K7EQZ3 153 aa5.87□□□□□ -1.47
APTX-230ENST00000494649 Q8N9L7 120 aa5.87□□□□□ -1.47
APTX-230ENST00000494649 BPY2O14599 106 aa5.86□□□□□ -1.47
APTX-230ENST00000494649 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
APTX-230ENST00000494649 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
APTX-230ENST00000494649 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
APTX-230ENST00000494649 UBL5Q9BZL1 73 aa5.83□□□□□ -1.48
APTX-230ENST00000494649 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
APTX-230ENST00000494649 WFDC13Q8IUB5 93 aa5.79□□□□□ -1.48
APTX-230ENST00000494649 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
APTX-230ENST00000494649 NDUFS5O43920 106 aa5.77□□□□□ -1.49
APTX-230ENST00000494649 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
APTX-230ENST00000494649 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
APTX-230ENST00000494649 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
APTX-230ENST00000494649 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
APTX-230ENST00000494649 MRPL34Q9BQ48 92 aaKnown RBP5.76□□□□□ -1.49
APTX-230ENST00000494649 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
APTX-230ENST00000494649 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
APTX-230ENST00000494649 ZCCHC13Q8WW36 166 aaKnown RBP5.75□□□□□ -1.49
APTX-230ENST00000494649 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
APTX-230ENST00000494649 K7ERU9 68 aa5.73□□□□□ -1.49
APTX-230ENST00000494649 CASC2Q6XLA1 102 aa5.73□□□□□ -1.49
APTX-230ENST00000494649 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
APTX-230ENST00000494649 J3QR89 54 aa5.7□□□□□ -1.5
APTX-230ENST00000494649 ACYP1P07311 99 aa5.7□□□□□ -1.5
APTX-230ENST00000494649 CXCL6P80162 114 aa5.69□□□□□ -1.5
APTX-230ENST00000494649 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
APTX-230ENST00000494649 MT1HP80294 61 aa5.68□□□□□ -1.5
APTX-230ENST00000494649 SPINK7P58062 85 aa5.68□□□□□ -1.5
APTX-230ENST00000494649 Q5W150 140 aa5.67□□□□□ -1.5
APTX-230ENST00000494649 HRES1P13985 223 aa5.65□□□□□ -1.5
APTX-230ENST00000494649 HIST1H4AP62805 103 aaKnown RBP5.65□□□□□ -1.5
APTX-230ENST00000494649 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
APTX-230ENST00000494649 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
APTX-230ENST00000494649 M0R2T5 61 aa5.63□□□□□ -1.51
APTX-230ENST00000494649 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
APTX-230ENST00000494649 IGKV2D-30A0A075B6S6 120 aa5.62□□□□□ -1.51
APTX-230ENST00000494649 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
APTX-230ENST00000494649 A0A087WVE0 104 aa5.62□□□□□ -1.51
APTX-230ENST00000494649 RBM12B-AS1Q9P1G2 102 aa5.6□□□□□ -1.51
APTX-230ENST00000494649 KRTAP9-6A0A140TA67 174 aa5.6□□□□□ -1.51
APTX-230ENST00000494649 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
APTX-230ENST00000494649 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
APTX-230ENST00000494649 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.51
APTX-230ENST00000494649 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
APTX-230ENST00000494649 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
APTX-230ENST00000494649 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
APTX-230ENST00000494649 TP53AIP1Q9HCN2 124 aa5.52□□□□□ -1.53
APTX-230ENST00000494649 C4orf26Q17RF5 130 aa5.51□□□□□ -1.53
APTX-230ENST00000494649 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
APTX-230ENST00000494649 TRAV22A0A0B4J277 110 aa5.47□□□□□ -1.53
APTX-230ENST00000494649 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
APTX-230ENST00000494649 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
APTX-230ENST00000494649 MT-ATP8P03928 68 aa5.47□□□□□ -1.53
APTX-230ENST00000494649 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
APTX-230ENST00000494649 H0Y9P7 68 aa5.44□□□□□ -1.54
APTX-230ENST00000494649 UQCRQO14949 82 aa5.43□□□□□ -1.54
APTX-230ENST00000494649 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
APTX-230ENST00000494649 H1FX-AS1Q4G0G2 97 aa5.42□□□□□ -1.54
APTX-230ENST00000494649 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
APTX-230ENST00000494649 OCR1Q9BZK8 76 aa5.41□□□□□ -1.54
APTX-230ENST00000494649 PCP4P48539 62 aa5.4□□□□□ -1.54
APTX-230ENST00000494649 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
APTX-230ENST00000494649 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
APTX-230ENST00000494649 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
APTX-230ENST00000494649 LOC101927531A0A1B0GV80 90 aa5.39□□□□□ -1.55
APTX-230ENST00000494649 LINC00208Q96KT6 92 aa5.39□□□□□ -1.55
APTX-230ENST00000494649 IMUPQ9GZP8 106 aa5.38□□□□□ -1.55
APTX-230ENST00000494649 ATOX1O00244 68 aa5.37□□□□□ -1.55
APTX-230ENST00000494649 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
APTX-230ENST00000494649 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
APTX-230ENST00000494649 MT2AP02795 61 aa5.35□□□□□ -1.55
APTX-230ENST00000494649 MP68P56378 58 aa5.35□□□□□ -1.55
APTX-230ENST00000494649 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
APTX-230ENST00000494649 MT1FP04733 61 aa5.33□□□□□ -1.56
APTX-230ENST00000494649 C5orf47Q569G3 176 aa5.33□□□□□ -1.56
APTX-230ENST00000494649 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
APTX-230ENST00000494649 S4R3F8 94 aa5.31□□□□□ -1.56
APTX-230ENST00000494649 LCA10Q71F78 164 aa5.3□□□□□ -1.56
APTX-230ENST00000494649 ANAPC13Q9BS18 74 aa5.27□□□□□ -1.57
APTX-230ENST00000494649 TRAV7A0A075B6U4 112 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms