RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 PRR15Q8IV56 129 aa11.8□□□□□ -0.52
KPNA1-210ENST00000494339 SMIM20Q8N5G0 67 aa11.8□□□□□ -0.52
KPNA1-210ENST00000494339 TNXBP22105 4242 aa11.79□□□□□ -0.52
KPNA1-210ENST00000494339 NDUFB1O75438 58 aa11.79□□□□□ -0.52
KPNA1-210ENST00000494339 SERP2Q8N6R1 65 aa11.78□□□□□ -0.52
KPNA1-210ENST00000494339 RPS29P62273 56 aaKnown RBP11.76□□□□□ -0.53
KPNA1-210ENST00000494339 HCG22E2RYF7 251 aa11.76□□□□□ -0.53
KPNA1-210ENST00000494339 MT1HL1P0DM35 61 aa11.76□□□□□ -0.53
KPNA1-210ENST00000494339 COX7CP15954 63 aa11.74□□□□□ -0.53
KPNA1-210ENST00000494339 C1orf195Q5TG92 126 aa11.74□□□□□ -0.53
KPNA1-210ENST00000494339 UQCRQO14949 82 aa11.72□□□□□ -0.53
KPNA1-210ENST00000494339 OXTP01178 125 aa11.72□□□□□ -0.53
KPNA1-210ENST00000494339 TRAV7A0A075B6U4 112 aa11.72□□□□□ -0.53
KPNA1-210ENST00000494339 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
KPNA1-210ENST00000494339 CCDC179H3BU77 68 aa11.68□□□□□ -0.54
KPNA1-210ENST00000494339 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
KPNA1-210ENST00000494339 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
KPNA1-210ENST00000494339 CASC2Q6XLA1 102 aa11.65□□□□□ -0.54
KPNA1-210ENST00000494339 WFDC13Q8IUB5 93 aa11.65□□□□□ -0.54
KPNA1-210ENST00000494339 OCR1Q9BZK8 76 aa11.65□□□□□ -0.54
KPNA1-210ENST00000494339 RETNLBQ9BQ08 111 aa11.64□□□□□ -0.55
KPNA1-210ENST00000494339 MMP24-AS1A0A0U1RRL7 71 aa11.63□□□□□ -0.55
KPNA1-210ENST00000494339 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
KPNA1-210ENST00000494339 C8orf17Q9NRJ1 99 aa11.61□□□□□ -0.55
KPNA1-210ENST00000494339 hDV103S1A0JD37 113 aa11.59□□□□□ -0.55
KPNA1-210ENST00000494339 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
KPNA1-210ENST00000494339 C8orf87E5RJ46 101 aa11.54□□□□□ -0.56
KPNA1-210ENST00000494339 J3QL48 77 aa11.54□□□□□ -0.56
KPNA1-210ENST00000494339 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
KPNA1-210ENST00000494339 TMEM254Q8TBM7 123 aa11.51□□□□□ -0.57
KPNA1-210ENST00000494339 MRPL34Q9BQ48 92 aaKnown RBP11.48□□□□□ -0.57
KPNA1-210ENST00000494339 LINC00313P59037 77 aa11.47□□□□□ -0.57
KPNA1-210ENST00000494339 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
KPNA1-210ENST00000494339 C5orf47Q569G3 176 aa11.47□□□□□ -0.57
KPNA1-210ENST00000494339 HERC1Q15751 4861 aa11.47□□□□□ -0.57
KPNA1-210ENST00000494339 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.58
KPNA1-210ENST00000494339 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
KPNA1-210ENST00000494339 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
KPNA1-210ENST00000494339 C9orf92A6NGG3 77 aa11.4□□□□□ -0.58
KPNA1-210ENST00000494339 CYSTM1Q9H1C7 97 aa11.39□□□□□ -0.59
KPNA1-210ENST00000494339 SNURFQ9Y675 71 aa11.39□□□□□ -0.59
KPNA1-210ENST00000494339 NDUFS5O43920 106 aa11.39□□□□□ -0.59
KPNA1-210ENST00000494339 MP68P56378 58 aa11.39□□□□□ -0.59
KPNA1-210ENST00000494339 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
KPNA1-210ENST00000494339 PRR4Q16378 134 aa11.37□□□□□ -0.59
KPNA1-210ENST00000494339 NDUFC1O43677 76 aa11.36□□□□□ -0.59
KPNA1-210ENST00000494339 KRTAP16-1A8MUX0 517 aa11.35□□□□□ -0.59
KPNA1-210ENST00000494339 H3BPC8 53 aa11.35□□□□□ -0.59
KPNA1-210ENST00000494339 TRAV22A0A0B4J277 110 aa11.34□□□□□ -0.59
KPNA1-210ENST00000494339 H0Y9P7 68 aa11.34□□□□□ -0.59
KPNA1-210ENST00000494339 Q8N9P0 234 aaPredicted RBP11.33□□□□□ -0.6
KPNA1-210ENST00000494339 H7BZZ5 65 aa11.3□□□□□ -0.6
KPNA1-210ENST00000494339 TMEM258P61165 79 aa11.3□□□□□ -0.6
KPNA1-210ENST00000494339 ZCCHC13Q8WW36 166 aaKnown RBP11.3□□□□□ -0.6
KPNA1-210ENST00000494339 LINC00208Q96KT6 92 aa11.27□□□□□ -0.6
KPNA1-210ENST00000494339 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
KPNA1-210ENST00000494339 C1orf64Q8NEQ6 169 aa11.23□□□□□ -0.61
KPNA1-210ENST00000494339 Q5W150 140 aa11.17□□□□□ -0.62
KPNA1-210ENST00000494339 C20orf166-AS1Q96NR2 134 aa11.17□□□□□ -0.62
KPNA1-210ENST00000494339 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
KPNA1-210ENST00000494339 A8MUU9 505 aa11.15□□□□□ -0.62
KPNA1-210ENST00000494339 XP32Q5T750 250 aa11.15□□□□□ -0.62
KPNA1-210ENST00000494339 FAM236DA0A1B0GTK5 79 aa11.14□□□□□ -0.63
KPNA1-210ENST00000494339 FAM236CP0DP71 79 aa11.14□□□□□ -0.63
KPNA1-210ENST00000494339 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
KPNA1-210ENST00000494339 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
KPNA1-210ENST00000494339 HMCN2Q8NDA2 5059 aa11.12□□□□□ -0.63
KPNA1-210ENST00000494339 Q75L30 129 aa11.11□□□□□ -0.63
KPNA1-210ENST00000494339 LPAP08519 4548 aa11.1□□□□□ -0.63
KPNA1-210ENST00000494339 RPL37P61927 97 aaKnown RBP11.04□□□□□ -0.64
KPNA1-210ENST00000494339 SPANXA2-OT1Q8N9U9 137 aa11.03□□□□□ -0.64
KPNA1-210ENST00000494339 CYP4F30PQ9H0H9 118 aa11.03□□□□□ -0.64
KPNA1-210ENST00000494339 IGKV2-30P06310 120 aa11□□□□□ -0.65
KPNA1-210ENST00000494339 PCOTHQ58A44 107 aa10.99□□□□□ -0.65
KPNA1-210ENST00000494339 LRP2P98164 4655 aa10.99□□□□□ -0.65
KPNA1-210ENST00000494339 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
KPNA1-210ENST00000494339 RPS28P62857 69 aaKnown RBP10.98□□□□□ -0.65
KPNA1-210ENST00000494339 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
KPNA1-210ENST00000494339 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
KPNA1-210ENST00000494339 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
KPNA1-210ENST00000494339 HRES1P13985 223 aa10.84□□□□□ -0.67
KPNA1-210ENST00000494339 SPINK7P58062 85 aa10.81□□□□□ -0.68
KPNA1-210ENST00000494339 SEC61BP60468 96 aaKnown RBP10.79□□□□□ -0.68
KPNA1-210ENST00000494339 UBR4Q5T4S7 5183 aa10.77□□□□□ -0.69
KPNA1-210ENST00000494339 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
KPNA1-210ENST00000494339 ACYP2P14621 99 aa10.68□□□□□ -0.7
KPNA1-210ENST00000494339 SMIM26A0A096LP01 95 aa10.67□□□□□ -0.7
KPNA1-210ENST00000494339 COA5Q86WW8 74 aa10.67□□□□□ -0.7
KPNA1-210ENST00000494339 C4orf26Q17RF5 130 aa10.64□□□□□ -0.71
KPNA1-210ENST00000494339 MUC17Q685J3 4493 aa10.62□□□□□ -0.71
KPNA1-210ENST00000494339 A8MUN3 132 aa10.61□□□□□ -0.71
KPNA1-210ENST00000494339 KRTAP4-1Q9BYQ7 146 aa10.61□□□□□ -0.71
KPNA1-210ENST00000494339 RNF213Q63HN8 5207 aa10.57□□□□□ -0.72
KPNA1-210ENST00000494339 MUC2Q02817 5179 aa10.55□□□□□ -0.72
KPNA1-210ENST00000494339 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
KPNA1-210ENST00000494339 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
KPNA1-210ENST00000494339 KRTAP3-1Q9BYR8 98 aa10.47□□□□□ -0.73
KPNA1-210ENST00000494339 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.74
KPNA1-210ENST00000494339 Q1T7F1 81 aa10.45□□□□□ -0.74
KPNA1-210ENST00000494339 RBM12B-AS1Q9P1G2 102 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms