RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 DSCR10P59022 87 aa7.94□□□□□ -1.14
BRCA1-223ENST00000494123 A8MWP4 228 aa7.93□□□□□ -1.14
BRCA1-223ENST00000494123 BPY2O14599 106 aa7.93□□□□□ -1.14
BRCA1-223ENST00000494123 LINC00313P59037 77 aa7.93□□□□□ -1.14
BRCA1-223ENST00000494123 ACYP1P07311 99 aa7.92□□□□□ -1.14
BRCA1-223ENST00000494123 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
BRCA1-223ENST00000494123 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
BRCA1-223ENST00000494123 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
BRCA1-223ENST00000494123 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
BRCA1-223ENST00000494123 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
BRCA1-223ENST00000494123 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
BRCA1-223ENST00000494123 PRR15Q8IV56 129 aa7.87□□□□□ -1.15
BRCA1-223ENST00000494123 K7EQZ3 153 aa7.86□□□□□ -1.15
BRCA1-223ENST00000494123 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
BRCA1-223ENST00000494123 J3QR89 54 aa7.85□□□□□ -1.15
BRCA1-223ENST00000494123 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
BRCA1-223ENST00000494123 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
BRCA1-223ENST00000494123 Q75L30 129 aa7.83□□□□□ -1.16
BRCA1-223ENST00000494123 Q8N9L7 120 aa7.82□□□□□ -1.16
BRCA1-223ENST00000494123 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
BRCA1-223ENST00000494123 PCOTHQ58A44 107 aa7.81□□□□□ -1.16
BRCA1-223ENST00000494123 A8MUU9 505 aa7.81□□□□□ -1.16
BRCA1-223ENST00000494123 CXCL6P80162 114 aa7.81□□□□□ -1.16
BRCA1-223ENST00000494123 ATP11AUNQ6ZP68 121 aa7.8□□□□□ -1.16
BRCA1-223ENST00000494123 MMP24-AS1A0A0U1RRL7 71 aa7.78□□□□□ -1.16
BRCA1-223ENST00000494123 hDV103S1A0JD37 113 aa7.77□□□□□ -1.17
BRCA1-223ENST00000494123 ATP5EP2Q5VTU8 51 aa7.76□□□□□ -1.17
BRCA1-223ENST00000494123 TMEM254Q8TBM7 123 aa7.76□□□□□ -1.17
BRCA1-223ENST00000494123 MUC17Q685J3 4493 aa7.76□□□□□ -1.17
BRCA1-223ENST00000494123 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-223ENST00000494123 WFDC13Q8IUB5 93 aa7.74□□□□□ -1.17
BRCA1-223ENST00000494123 MRPL34Q9BQ48 92 aaKnown RBP7.74□□□□□ -1.17
BRCA1-223ENST00000494123 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
BRCA1-223ENST00000494123 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
BRCA1-223ENST00000494123 K7ERU9 68 aa7.73□□□□□ -1.17
BRCA1-223ENST00000494123 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-223ENST00000494123 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
BRCA1-223ENST00000494123 NDUFS5O43920 106 aa7.7□□□□□ -1.18
BRCA1-223ENST00000494123 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
BRCA1-223ENST00000494123 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
BRCA1-223ENST00000494123 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
BRCA1-223ENST00000494123 ZCCHC13Q8WW36 166 aaKnown RBP7.67□□□□□ -1.18
BRCA1-223ENST00000494123 MUC2Q02817 5179 aa7.62□□□□□ -1.19
BRCA1-223ENST00000494123 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
BRCA1-223ENST00000494123 A0A087WVE0 104 aa7.59□□□□□ -1.19
BRCA1-223ENST00000494123 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
BRCA1-223ENST00000494123 Q5W150 140 aa7.53□□□□□ -1.2
BRCA1-223ENST00000494123 MT-ATP8P03928 68 aa7.52□□□□□ -1.21
BRCA1-223ENST00000494123 SPINK7P58062 85 aa7.52□□□□□ -1.21
BRCA1-223ENST00000494123 IMUPQ9GZP8 106 aa7.5□□□□□ -1.21
BRCA1-223ENST00000494123 IGKV2D-30A0A075B6S6 120 aa7.48□□□□□ -1.21
BRCA1-223ENST00000494123 IGKV2-30P06310 120 aa7.48□□□□□ -1.21
BRCA1-223ENST00000494123 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
BRCA1-223ENST00000494123 C7orf65Q6ZTY9 151 aa7.45□□□□□ -1.22
BRCA1-223ENST00000494123 SCGB1A1P11684 91 aa7.45□□□□□ -1.22
BRCA1-223ENST00000494123 HRES1P13985 223 aa7.45□□□□□ -1.22
BRCA1-223ENST00000494123 UQCRQO14949 82 aa7.44□□□□□ -1.22
BRCA1-223ENST00000494123 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
BRCA1-223ENST00000494123 TRAV22A0A0B4J277 110 aa7.43□□□□□ -1.22
BRCA1-223ENST00000494123 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
BRCA1-223ENST00000494123 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
BRCA1-223ENST00000494123 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
BRCA1-223ENST00000494123 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
BRCA1-223ENST00000494123 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
BRCA1-223ENST00000494123 H0Y9P7 68 aa7.38□□□□□ -1.23
BRCA1-223ENST00000494123 MPLKIPQ8TAP9 179 aa7.38□□□□□ -1.23
BRCA1-223ENST00000494123 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
BRCA1-223ENST00000494123 FAM236AA0A1B0GUQ0 79 aa7.38□□□□□ -1.23
BRCA1-223ENST00000494123 FAM236BA0A1B0GV22 79 aa7.38□□□□□ -1.23
BRCA1-223ENST00000494123 ATOX1O00244 68 aa7.38□□□□□ -1.23
BRCA1-223ENST00000494123 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
BRCA1-223ENST00000494123 MP68P56378 58 aa7.34□□□□□ -1.24
BRCA1-223ENST00000494123 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
BRCA1-223ENST00000494123 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-223ENST00000494123 SMIM20Q8N5G0 67 aa7.31□□□□□ -1.24
BRCA1-223ENST00000494123 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
BRCA1-223ENST00000494123 MT1HP80294 61 aa7.3□□□□□ -1.24
BRCA1-223ENST00000494123 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
BRCA1-223ENST00000494123 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
BRCA1-223ENST00000494123 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
BRCA1-223ENST00000494123 M0R2T5 61 aa7.27□□□□□ -1.25
BRCA1-223ENST00000494123 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
BRCA1-223ENST00000494123 H3BPC8 53 aa7.25□□□□□ -1.25
BRCA1-223ENST00000494123 H1FX-AS1Q4G0G2 97 aa7.21□□□□□ -1.26
BRCA1-223ENST00000494123 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
BRCA1-223ENST00000494123 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.26
BRCA1-223ENST00000494123 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-223ENST00000494123 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
BRCA1-223ENST00000494123 SERP2Q8N6R1 65 aa7.17□□□□□ -1.26
BRCA1-223ENST00000494123 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
BRCA1-223ENST00000494123 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-223ENST00000494123 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
BRCA1-223ENST00000494123 C20orf197Q8N268 126 aa7.09□□□□□ -1.28
BRCA1-223ENST00000494123 S4R3F8 94 aa7.08□□□□□ -1.28
BRCA1-223ENST00000494123 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-223ENST00000494123 A8MUN3 132 aa7.06□□□□□ -1.28
BRCA1-223ENST00000494123 COX7CP15954 63 aa7.05□□□□□ -1.28
BRCA1-223ENST00000494123 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
BRCA1-223ENST00000494123 LCA10Q71F78 164 aa7.01□□□□□ -1.29
BRCA1-223ENST00000494123 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms