RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	C8orf87	E5RJ46	101 aa		6.47	□□□□□ -1.37
SAMM50-204	ENST00000493161	TRAC	P01848	142 aa		6.46	□□□□□ -1.38
SAMM50-204	ENST00000493161	C2orf91	Q6ZV80	131 aa		6.46	□□□□□ -1.38
SAMM50-204	ENST00000493161	WFDC13	Q8IUB5	93 aa		6.46	□□□□□ -1.38
SAMM50-204	ENST00000493161	PRO1854	Q9UHT4	67 aa		6.46	□□□□□ -1.38
SAMM50-204	ENST00000493161	HIGD1B	Q9P298	99 aa		6.45	□□□□□ -1.38
SAMM50-204	ENST00000493161	ORMDL1	Q9P0S3	153 aa		6.44	□□□□□ -1.38
SAMM50-204	ENST00000493161	CEND1	Q8N111	149 aa		6.42	□□□□□ -1.38
SAMM50-204	ENST00000493161	FXYD2	P54710	66 aa		6.41	□□□□□ -1.38
SAMM50-204	ENST00000493161	VPS25	Q9BRG1	176 aa		6.41	□□□□□ -1.38
SAMM50-204	ENST00000493161	DNAL4	O96015	105 aa		6.4	□□□□□ -1.38
SAMM50-204	ENST00000493161		H3BS24	57 aa		6.39	□□□□□ -1.39
SAMM50-204	ENST00000493161	TMEM256-PLSCR3	K7ERE1	68 aa		6.39	□□□□□ -1.39
SAMM50-204	ENST00000493161	PAM16	Q9Y3D7	125 aa		6.39	□□□□□ -1.39
SAMM50-204	ENST00000493161	SPATA45	Q537H7	98 aa		6.38	□□□□□ -1.39
SAMM50-204	ENST00000493161	MUC12	Q9UKN1	5478 aa		6.37	□□□□□ -1.39
SAMM50-204	ENST00000493161		H3BQ85	93 aa		6.36	□□□□□ -1.39
SAMM50-204	ENST00000493161	S100A6	P06703	90 aa		6.36	□□□□□ -1.39
SAMM50-204	ENST00000493161		K7ERJ3	54 aa		6.35	□□□□□ -1.39
SAMM50-204	ENST00000493161	PSMB2	P49721	201 aa		6.35	□□□□□ -1.39
SAMM50-204	ENST00000493161	UBE2V1	Q13404	147 aa		6.35	□□□□□ -1.39
SAMM50-204	ENST00000493161	LYRM7	Q5U5X0	104 aa		6.35	□□□□□ -1.39
SAMM50-204	ENST00000493161		J3KT08	172 aa		6.33	□□□□□ -1.4
SAMM50-204	ENST00000493161	H1FX-AS1	Q4G0G2	97 aa		6.33	□□□□□ -1.4
SAMM50-204	ENST00000493161	C8orf17	Q9NRJ1	99 aa		6.33	□□□□□ -1.4
SAMM50-204	ENST00000493161	RBM3	P98179	157 aa	Known RBP	6.32	□□□□□ -1.4
SAMM50-204	ENST00000493161		Q6ZQT0	140 aa		6.31	□□□□□ -1.4
SAMM50-204	ENST00000493161	KRTAP20-1	Q3LI63	56 aa		6.3	□□□□□ -1.4
SAMM50-204	ENST00000493161	DSCR8	Q96T75	97 aa		6.3	□□□□□ -1.4
SAMM50-204	ENST00000493161	VAMP8	Q9BV40	100 aa		6.3	□□□□□ -1.4
SAMM50-204	ENST00000493161	IGKV3D-7	A0A0C4DH55	119 aa		6.29	□□□□□ -1.4
SAMM50-204	ENST00000493161	NDUFB1	O75438	58 aa		6.29	□□□□□ -1.4
SAMM50-204	ENST00000493161	TMA7	Q9Y2S6	64 aa	Known RBP	6.29	□□□□□ -1.4
SAMM50-204	ENST00000493161		A6NN06	94 aa		6.27	□□□□□ -1.41
SAMM50-204	ENST00000493161	COX6C	P09669	75 aa		6.27	□□□□□ -1.41
SAMM50-204	ENST00000493161		Q6ZVQ6	151 aa		6.27	□□□□□ -1.41
SAMM50-204	ENST00000493161	MT1B	P07438	61 aa		6.26	□□□□□ -1.41
SAMM50-204	ENST00000493161		C9JAW5	83 aa		6.25	□□□□□ -1.41
SAMM50-204	ENST00000493161	S100A1	P23297	94 aa		6.25	□□□□□ -1.41
SAMM50-204	ENST00000493161	HSD52	Q0P140	79 aa		6.23	□□□□□ -1.41
SAMM50-204	ENST00000493161	BAALC-AS2	P0C853	105 aa		6.21	□□□□□ -1.42
SAMM50-204	ENST00000493161	C21orf62-AS1	Q17RA5	79 aa		6.21	□□□□□ -1.42
SAMM50-204	ENST00000493161	KRTAP4-8	Q9BYQ9	185 aa		6.21	□□□□□ -1.42
SAMM50-204	ENST00000493161	PRR15	Q8IV56	129 aa		6.2	□□□□□ -1.42
SAMM50-204	ENST00000493161	MMP24-AS1	A0A0U1RRL7	71 aa		6.19	□□□□□ -1.42
SAMM50-204	ENST00000493161	MRPL34	Q9BQ48	92 aa	Known RBP	6.19	□□□□□ -1.42
SAMM50-204	ENST00000493161	IGKV2D-30	A0A075B6S6	120 aa		6.18	□□□□□ -1.42
SAMM50-204	ENST00000493161	IGKV2-30	P06310	120 aa		6.18	□□□□□ -1.42
SAMM50-204	ENST00000493161	SCGB1C2	P0DMR2	95 aa		6.18	□□□□□ -1.42
SAMM50-204	ENST00000493161	KRTAP5-9	P26371	169 aa		6.17	□□□□□ -1.42
SAMM50-204	ENST00000493161	TMEM254	Q8TBM7	123 aa		6.17	□□□□□ -1.42
SAMM50-204	ENST00000493161		Q5VV11	94 aa		6.16	□□□□□ -1.42
SAMM50-204	ENST00000493161	KMT2D	O14686	5537 aa		6.15	□□□□□ -1.42
SAMM50-204	ENST00000493161	KRTAP10-5	P60370	271 aa		6.15	□□□□□ -1.42
SAMM50-204	ENST00000493161	KRTAP19-8	Q3LI54	63 aa		6.15	□□□□□ -1.42
SAMM50-204	ENST00000493161		Q5W150	140 aa		6.15	□□□□□ -1.42
SAMM50-204	ENST00000493161	LOC110117498	A0A087WWA1	95 aa		6.14	□□□□□ -1.43
SAMM50-204	ENST00000493161	NDUFS5	O43920	106 aa		6.14	□□□□□ -1.43
SAMM50-204	ENST00000493161	C5orf47	Q569G3	176 aa		6.14	□□□□□ -1.43
SAMM50-204	ENST00000493161	FAM236A	A0A1B0GUQ0	79 aa		6.13	□□□□□ -1.43
SAMM50-204	ENST00000493161	FAM236B	A0A1B0GV22	79 aa		6.13	□□□□□ -1.43
SAMM50-204	ENST00000493161	C4orf26	Q17RF5	130 aa		6.13	□□□□□ -1.43
SAMM50-204	ENST00000493161	MDN1	Q9NU22	5596 aa		6.12	□□□□□ -1.43
SAMM50-204	ENST00000493161	hDV103S1	A0JD37	113 aa		6.12	□□□□□ -1.43
SAMM50-204	ENST00000493161	SPRR2G	Q9BYE4	73 aa		6.12	□□□□□ -1.43
SAMM50-204	ENST00000493161		A0A1B0GW54	56 aa		6.11	□□□□□ -1.43
SAMM50-204	ENST00000493161		K7EQZ3	153 aa		6.11	□□□□□ -1.43
SAMM50-204	ENST00000493161	C7orf65	Q6ZTY9	151 aa		6.11	□□□□□ -1.43
SAMM50-204	ENST00000493161	C14orf132	Q9NPU4	83 aa		6.11	□□□□□ -1.43
SAMM50-204	ENST00000493161	JMJD7-PLA2G4B	H0Y9G9	81 aa		6.09	□□□□□ -1.43
SAMM50-204	ENST00000493161	NREP	Q16612	68 aa		6.09	□□□□□ -1.43
SAMM50-204	ENST00000493161	PYY3	Q5JQD4	70 aa		6.09	□□□□□ -1.43
SAMM50-204	ENST00000493161	NAA38	Q9BRA0	125 aa	Known RBP	6.06	□□□□□ -1.44
SAMM50-204	ENST00000493161	KRTAP3-1	Q9BYR8	98 aa		6.06	□□□□□ -1.44
SAMM50-204	ENST00000493161	PDE6G	P18545	87 aa		6.05	□□□□□ -1.44
SAMM50-204	ENST00000493161	KRTAP4-12	Q9BQ66	201 aa		6.05	□□□□□ -1.44
SAMM50-204	ENST00000493161	ATXN8	Q156A1	80 aa		6.04	□□□□□ -1.44
SAMM50-204	ENST00000493161	UQCR10	Q9UDW1	63 aa		6.04	□□□□□ -1.44
SAMM50-204	ENST00000493161	KRTAP2-3	P0C7H8	128 aa		6.03	□□□□□ -1.44
SAMM50-204	ENST00000493161	KRTAP2-4	Q9BYR9	128 aa		6.03	□□□□□ -1.44
SAMM50-204	ENST00000493161		S4R3F8	94 aa		6.01	□□□□□ -1.45
SAMM50-204	ENST00000493161	LCA10	Q71F78	164 aa		6	□□□□□ -1.45
SAMM50-204	ENST00000493161	HCG22	E2RYF7	251 aa		5.99	□□□□□ -1.45
SAMM50-204	ENST00000493161	CSAG1	Q6PB30	78 aa		5.99	□□□□□ -1.45
SAMM50-204	ENST00000493161		Q8N9L7	120 aa		5.98	□□□□□ -1.45
SAMM50-204	ENST00000493161	KLKP1	Q107X0	134 aa		5.97	□□□□□ -1.45
SAMM50-204	ENST00000493161	CASC2	Q6XLA1	102 aa		5.96	□□□□□ -1.46
SAMM50-204	ENST00000493161	BPY2	O14599	106 aa		5.95	□□□□□ -1.46
SAMM50-204	ENST00000493161	LCE3B	Q5TA77	95 aa		5.95	□□□□□ -1.46
SAMM50-204	ENST00000493161	C1orf64	Q8NEQ6	169 aa		5.94	□□□□□ -1.46
SAMM50-204	ENST00000493161	IMUP	Q9GZP8	106 aa		5.94	□□□□□ -1.46
SAMM50-204	ENST00000493161	SPRR2E	P22531	72 aa		5.91	□□□□□ -1.46
SAMM50-204	ENST00000493161	SPRR2B	P35325	72 aa		5.91	□□□□□ -1.46
SAMM50-204	ENST00000493161	SPRR2A	P35326	72 aa		5.91	□□□□□ -1.46
SAMM50-204	ENST00000493161	CXCL6	P80162	114 aa		5.91	□□□□□ -1.46
SAMM50-204	ENST00000493161	SPRR2F	Q96RM1	72 aa		5.91	□□□□□ -1.46
SAMM50-204	ENST00000493161		M0R143	59 aa		5.84	□□□□□ -1.47
SAMM50-204	ENST00000493161		A0A087WVE0	104 aa		5.83	□□□□□ -1.48
SAMM50-204	ENST00000493161	CRIPT	Q9P021	101 aa		5.82	□□□□□ -1.48
SAMM50-204	ENST00000493161	KRTAP19-4	Q3LI73	84 aa		5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms