RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
MDC1-207ENST00000492462 RBM3P98179 157 aaKnown RBP6.05□□□□□ -1.44
MDC1-207ENST00000492462 MACF1Q9UPN3 7388 aaKnown RBP6.04□□□□□ -1.44
MDC1-207ENST00000492462 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
MDC1-207ENST00000492462 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
MDC1-207ENST00000492462 M0R143 59 aa6.02□□□□□ -1.45
MDC1-207ENST00000492462 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
MDC1-207ENST00000492462 C9JAW5 83 aa6□□□□□ -1.45
MDC1-207ENST00000492462 ATXN8Q156A1 80 aa5.99□□□□□ -1.45
MDC1-207ENST00000492462 A0A1B0GVX0 72 aa5.98□□□□□ -1.45
MDC1-207ENST00000492462 Q6ZQT0 140 aa5.98□□□□□ -1.45
MDC1-207ENST00000492462 TRBV20-1A0A075B6N2 111 aa5.96□□□□□ -1.46
MDC1-207ENST00000492462 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
MDC1-207ENST00000492462 BATFQ16520 125 aa5.95□□□□□ -1.46
MDC1-207ENST00000492462 HRES1P13985 223 aa5.94□□□□□ -1.46
MDC1-207ENST00000492462 C14orf132Q9NPU4 83 aa5.94□□□□□ -1.46
MDC1-207ENST00000492462 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
MDC1-207ENST00000492462 JMJD7-PLA2G4BH0Y9G9 81 aa5.93□□□□□ -1.46
MDC1-207ENST00000492462 LOC105371267A0A1B0GV96 52 aa5.92□□□□□ -1.46
MDC1-207ENST00000492462 TSTD3H0UI37 97 aa5.92□□□□□ -1.46
MDC1-207ENST00000492462 J3KT08 172 aa5.92□□□□□ -1.46
MDC1-207ENST00000492462 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
MDC1-207ENST00000492462 C21orf62-AS1Q17RA5 79 aa5.91□□□□□ -1.46
MDC1-207ENST00000492462 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.46
MDC1-207ENST00000492462 IGKV3D-7A0A0C4DH55 119 aa5.89□□□□□ -1.47
MDC1-207ENST00000492462 FAM236DA0A1B0GTK5 79 aa5.89□□□□□ -1.47
MDC1-207ENST00000492462 FAM236CP0DP71 79 aa5.89□□□□□ -1.47
MDC1-207ENST00000492462 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
MDC1-207ENST00000492462 MTURNQ8N3F0 131 aa5.89□□□□□ -1.47
MDC1-207ENST00000492462 ZCCHC13Q8WW36 166 aaKnown RBP5.89□□□□□ -1.47
MDC1-207ENST00000492462 A8MWP4 228 aa5.88□□□□□ -1.47
MDC1-207ENST00000492462 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
MDC1-207ENST00000492462 NDUFB1O75438 58 aa5.88□□□□□ -1.47
MDC1-207ENST00000492462 PDE6GP18545 87 aa5.88□□□□□ -1.47
MDC1-207ENST00000492462 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
MDC1-207ENST00000492462 A0A1B0GW54 56 aa5.87□□□□□ -1.47
MDC1-207ENST00000492462 C9orf118A6NHY6 69 aa5.87□□□□□ -1.47
MDC1-207ENST00000492462 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
MDC1-207ENST00000492462 A0A1W2PPM0 123 aa5.85□□□□□ -1.47
MDC1-207ENST00000492462 SPINK7P58062 85 aa5.85□□□□□ -1.47
MDC1-207ENST00000492462 RBM12B-AS1Q9P1G2 102 aa5.85□□□□□ -1.47
MDC1-207ENST00000492462 NREPQ16612 68 aa5.83□□□□□ -1.48
MDC1-207ENST00000492462 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
MDC1-207ENST00000492462 H3BT86 120 aa5.82□□□□□ -1.48
MDC1-207ENST00000492462 MT2AP02795 61 aa5.82□□□□□ -1.48
MDC1-207ENST00000492462 Q6ZVQ6 151 aa5.82□□□□□ -1.48
MDC1-207ENST00000492462 NEBP20929 6669 aa5.81□□□□□ -1.48
MDC1-207ENST00000492462 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
MDC1-207ENST00000492462 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
MDC1-207ENST00000492462 K7EQZ3 153 aa5.79□□□□□ -1.48
MDC1-207ENST00000492462 MT1FP04733 61 aa5.79□□□□□ -1.48
MDC1-207ENST00000492462 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
MDC1-207ENST00000492462 WFDC13Q8IUB5 93 aa5.77□□□□□ -1.49
MDC1-207ENST00000492462 TMEM254Q8TBM7 123 aa5.77□□□□□ -1.49
MDC1-207ENST00000492462 MRPL34Q9BQ48 92 aaKnown RBP5.77□□□□□ -1.49
MDC1-207ENST00000492462 SPCS1Q9Y6A9 102 aa5.77□□□□□ -1.49
MDC1-207ENST00000492462 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
MDC1-207ENST00000492462 hDV103S1A0JD37 113 aa5.74□□□□□ -1.49
MDC1-207ENST00000492462 BPY2O14599 106 aa5.73□□□□□ -1.49
MDC1-207ENST00000492462 Q8N9L7 120 aa5.73□□□□□ -1.49
MDC1-207ENST00000492462 NDUFS5O43920 106 aa5.72□□□□□ -1.49
MDC1-207ENST00000492462 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
MDC1-207ENST00000492462 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
MDC1-207ENST00000492462 PRO0461Q9UI25 63 aa5.71□□□□□ -1.5
MDC1-207ENST00000492462 Q5W150 140 aa5.7□□□□□ -1.5
MDC1-207ENST00000492462 COL5A1-AS1Q5SY13 56 aa5.69□□□□□ -1.5
MDC1-207ENST00000492462 K7EP34 96 aa5.67□□□□□ -1.5
MDC1-207ENST00000492462 IGKV2D-30A0A075B6S6 120 aa5.66□□□□□ -1.5
MDC1-207ENST00000492462 IGKV2-30P06310 120 aa5.66□□□□□ -1.5
MDC1-207ENST00000492462 CASC2Q6XLA1 102 aa5.66□□□□□ -1.5
MDC1-207ENST00000492462 LINC00846Q9NV44 126 aa5.66□□□□□ -1.5
MDC1-207ENST00000492462 HCG22E2RYF7 251 aa5.64□□□□□ -1.51
MDC1-207ENST00000492462 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
MDC1-207ENST00000492462 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
MDC1-207ENST00000492462 C7orf65Q6ZTY9 151 aa5.61□□□□□ -1.51
MDC1-207ENST00000492462 UBL5Q9BZL1 73 aa5.6□□□□□ -1.51
MDC1-207ENST00000492462 PCP4L1A6NKN8 68 aa5.59□□□□□ -1.51
MDC1-207ENST00000492462 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
MDC1-207ENST00000492462 CXCL6P80162 114 aa5.57□□□□□ -1.52
MDC1-207ENST00000492462 ETDBQ3ZM63 59 aa5.55□□□□□ -1.52
MDC1-207ENST00000492462 GTF2H5Q6ZYL4 71 aa5.55□□□□□ -1.52
MDC1-207ENST00000492462 F8W1H4 67 aa5.53□□□□□ -1.52
MDC1-207ENST00000492462 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
MDC1-207ENST00000492462 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
MDC1-207ENST00000492462 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
MDC1-207ENST00000492462 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
MDC1-207ENST00000492462 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
MDC1-207ENST00000492462 KMT2DO14686 5537 aa5.44□□□□□ -1.54
MDC1-207ENST00000492462 S4R3F8 94 aa5.42□□□□□ -1.54
MDC1-207ENST00000492462 LCA10Q71F78 164 aa5.41□□□□□ -1.54
MDC1-207ENST00000492462 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
MDC1-207ENST00000492462 ACYP1P07311 99 aa5.37□□□□□ -1.55
MDC1-207ENST00000492462 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
MDC1-207ENST00000492462 CSAG1Q6PB30 78 aa5.37□□□□□ -1.55
MDC1-207ENST00000492462 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
MDC1-207ENST00000492462 A0A087WVE0 104 aa5.36□□□□□ -1.55
MDC1-207ENST00000492462 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
MDC1-207ENST00000492462 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
MDC1-207ENST00000492462 FAM240AA0A1B0GVK7 77 aa5.36□□□□□ -1.55
MDC1-207ENST00000492462 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms