RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 IGKV2-30P06310 120 aa5.65□□□□□ -1.5
VPS8-225ENST00000492449 TRRAPQ9Y4A5 3859 aa5.64□□□□□ -1.51
VPS8-225ENST00000492449 IGLV9-49A0A0B4J1Y8 123 aa5.64□□□□□ -1.51
VPS8-225ENST00000492449 P0C880 135 aa5.64□□□□□ -1.51
VPS8-225ENST00000492449 CSMD3Q7Z407 3707 aa5.64□□□□□ -1.51
VPS8-225ENST00000492449 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
VPS8-225ENST00000492449 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
VPS8-225ENST00000492449 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
VPS8-225ENST00000492449 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
VPS8-225ENST00000492449 COL6A5A8TX70 2615 aa5.6□□□□□ -1.51
VPS8-225ENST00000492449 LY6G6CO95867 125 aa5.6□□□□□ -1.51
VPS8-225ENST00000492449 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
VPS8-225ENST00000492449 STAB1Q9NY15 2570 aa5.59□□□□□ -1.52
VPS8-225ENST00000492449 ANK2Q01484 3957 aa5.58□□□□□ -1.52
VPS8-225ENST00000492449 H0YAA0 97 aa5.57□□□□□ -1.52
VPS8-225ENST00000492449 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
VPS8-225ENST00000492449 C14orf177Q52M58 125 aa5.55□□□□□ -1.52
VPS8-225ENST00000492449 LYSTQ99698 3801 aa5.55□□□□□ -1.52
VPS8-225ENST00000492449 Q6ZSA8 131 aa5.54□□□□□ -1.52
VPS8-225ENST00000492449 PANO1I0J062 215 aa5.52□□□□□ -1.53
VPS8-225ENST00000492449 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
VPS8-225ENST00000492449 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
VPS8-225ENST00000492449 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
VPS8-225ENST00000492449 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
VPS8-225ENST00000492449 KRTAP1-5Q9BYS1 174 aa5.48□□□□□ -1.53
VPS8-225ENST00000492449 KRTAP24-1Q3LI83 254 aa5.46□□□□□ -1.53
VPS8-225ENST00000492449 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
VPS8-225ENST00000492449 NOTCH1P46531 2555 aa5.46□□□□□ -1.54
VPS8-225ENST00000492449 FRAS1Q86XX4 4008 aa5.45□□□□□ -1.54
VPS8-225ENST00000492449 TENM3Q9P273 2699 aa5.45□□□□□ -1.54
VPS8-225ENST00000492449 NUPR2A6NF83 97 aa5.45□□□□□ -1.54
VPS8-225ENST00000492449 SPACA4Q8TDM5 124 aa5.45□□□□□ -1.54
VPS8-225ENST00000492449 DNHD1Q96M86 4753 aa5.45□□□□□ -1.54
VPS8-225ENST00000492449 A0A1B0GU33 70 aa5.44□□□□□ -1.54
VPS8-225ENST00000492449 DNAH9Q9NYC9 4486 aa5.44□□□□□ -1.54
VPS8-225ENST00000492449 A0A087WTM6 91 aa5.43□□□□□ -1.54
VPS8-225ENST00000492449 PSORS1C2Q9UIG4 136 aa5.43□□□□□ -1.54
VPS8-225ENST00000492449 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
VPS8-225ENST00000492449 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
VPS8-225ENST00000492449 C20orf166-AS1Q96NR2 134 aa5.41□□□□□ -1.54
VPS8-225ENST00000492449 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
VPS8-225ENST00000492449 K7ERS5 55 aa5.4□□□□□ -1.54
VPS8-225ENST00000492449 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
VPS8-225ENST00000492449 NBEAL1Q6ZS30 2694 aa5.4□□□□□ -1.54
VPS8-225ENST00000492449 SSBP3-AS1Q7Z2R9 100 aa5.4□□□□□ -1.54
VPS8-225ENST00000492449 SPINK1P00995 79 aa5.39□□□□□ -1.55
VPS8-225ENST00000492449 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
VPS8-225ENST00000492449 MGAM2Q2M2H8 2515 aa5.39□□□□□ -1.55
VPS8-225ENST00000492449 DNAH3Q8TD57 4116 aa5.38□□□□□ -1.55
VPS8-225ENST00000492449 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
VPS8-225ENST00000492449 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
VPS8-225ENST00000492449 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
VPS8-225ENST00000492449 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
VPS8-225ENST00000492449 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
VPS8-225ENST00000492449 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
VPS8-225ENST00000492449 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
VPS8-225ENST00000492449 CMYA5Q8N3K9 4069 aa5.34□□□□□ -1.55
VPS8-225ENST00000492449 Q8N1X5 172 aa5.33□□□□□ -1.56
VPS8-225ENST00000492449 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
VPS8-225ENST00000492449 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
VPS8-225ENST00000492449 HUWE1Q7Z6Z7 4374 aaKnown RBP5.28□□□□□ -1.56
VPS8-225ENST00000492449 UBE2DNLQ8IWF7 75 aa5.27□□□□□ -1.57
VPS8-225ENST00000492449 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
VPS8-225ENST00000492449 COX6B2Q6YFQ2 88 aa5.27□□□□□ -1.57
VPS8-225ENST00000492449 APLNQ9ULZ1 77 aa5.26□□□□□ -1.57
VPS8-225ENST00000492449 VPS13DQ5THJ4 4388 aa5.26□□□□□ -1.57
VPS8-225ENST00000492449 DNAH17Q9UFH2 4485 aa5.26□□□□□ -1.57
VPS8-225ENST00000492449 STAB2Q8WWQ8 2551 aa5.26□□□□□ -1.57
VPS8-225ENST00000492449 FLG2Q5D862 2391 aaPredicted RBP5.25□□□□□ -1.57
VPS8-225ENST00000492449 TGP01266 2768 aa5.25□□□□□ -1.57
VPS8-225ENST00000492449 DNAH7Q8WXX0 4024 aa5.24□□□□□ -1.57
VPS8-225ENST00000492449 HECTD4Q9Y4D8 3996 aa5.24□□□□□ -1.57
VPS8-225ENST00000492449 NBDYA0A0U1RRE5 68 aa5.23□□□□□ -1.57
VPS8-225ENST00000492449 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
VPS8-225ENST00000492449 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
VPS8-225ENST00000492449 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
VPS8-225ENST00000492449 PRKDCP78527 4128 aaKnown RBP5.2□□□□□ -1.58
VPS8-225ENST00000492449 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
VPS8-225ENST00000492449 KRTAP21-3Q3LHN1 58 aa5.17□□□□□ -1.58
VPS8-225ENST00000492449 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
VPS8-225ENST00000492449 DNAH6Q9C0G6 4158 aa5.13□□□□□ -1.59
VPS8-225ENST00000492449 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
VPS8-225ENST00000492449 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
VPS8-225ENST00000492449 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
VPS8-225ENST00000492449 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
VPS8-225ENST00000492449 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.6
VPS8-225ENST00000492449 PLECQ15149 4684 aaKnown RBP5.08□□□□□ -1.6
VPS8-225ENST00000492449 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
VPS8-225ENST00000492449 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
VPS8-225ENST00000492449 KRTAP1-4P0C5Y4 121 aa5.06□□□□□ -1.6
VPS8-225ENST00000492449 RPS29P62273 56 aaKnown RBP5.04□□□□□ -1.6
VPS8-225ENST00000492449 XP32Q5T750 250 aa5.04□□□□□ -1.6
VPS8-225ENST00000492449 S4R3F8 94 aa5.04□□□□□ -1.6
VPS8-225ENST00000492449 J3QL48 77 aa5.03□□□□□ -1.6
VPS8-225ENST00000492449 DNAH2Q9P225 4427 aa5.02□□□□□ -1.61
VPS8-225ENST00000492449 A0A0D9SG42 100 aa5.01□□□□□ -1.61
VPS8-225ENST00000492449 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
VPS8-225ENST00000492449 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
VPS8-225ENST00000492449 STARD9Q9P2P6 4700 aa4.96□□□□□ -1.61
VPS8-225ENST00000492449 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms