RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
CCDC6-202ENST00000491922 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
CCDC6-202ENST00000491922 KRTAP13-1Q8IUC0 172 aa3.84□□□□□ -1.79
CCDC6-202ENST00000491922 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.8
CCDC6-202ENST00000491922 K7EIL1 84 aa3.84□□□□□ -1.8
CCDC6-202ENST00000491922 CSAG1Q6PB30 78 aa3.84□□□□□ -1.8
CCDC6-202ENST00000491922 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.8
CCDC6-202ENST00000491922 Q5W150 140 aa3.83□□□□□ -1.8
CCDC6-202ENST00000491922 DNAH1Q9P2D7 4330 aa3.83□□□□□ -1.8
CCDC6-202ENST00000491922 SRRM2Q9UQ35 2752 aaKnown RBP3.83□□□□□ -1.8
CCDC6-202ENST00000491922 MEGF8Q7Z7M0 2845 aa3.82□□□□□ -1.8
CCDC6-202ENST00000491922 CHTF8P0CG12 524 aa3.82□□□□□ -1.8
CCDC6-202ENST00000491922 KRTAP24-1Q3LI83 254 aa3.82□□□□□ -1.8
CCDC6-202ENST00000491922 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
CCDC6-202ENST00000491922 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
CCDC6-202ENST00000491922 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
CCDC6-202ENST00000491922 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
CCDC6-202ENST00000491922 TENM1Q9UKZ4 2725 aa3.8□□□□□ -1.8
CCDC6-202ENST00000491922 C1orf134Q5TEV5 83 aa3.8□□□□□ -1.8
CCDC6-202ENST00000491922 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
CCDC6-202ENST00000491922 NOTCH1P46531 2555 aa3.79□□□□□ -1.8
CCDC6-202ENST00000491922 TENM3Q9P273 2699 aa3.79□□□□□ -1.8
CCDC6-202ENST00000491922 ZNF861PO60384 105 aa3.78□□□□□ -1.8
CCDC6-202ENST00000491922 WWC2-AS2Q96NR7 200 aa3.78□□□□□ -1.8
CCDC6-202ENST00000491922 TRRAPQ9Y4A5 3859 aa3.78□□□□□ -1.8
CCDC6-202ENST00000491922 FAM229AH3BQW9 127 aa3.77□□□□□ -1.81
CCDC6-202ENST00000491922 ROMO1P60602 79 aa3.76□□□□□ -1.81
CCDC6-202ENST00000491922 KRTAP1-5Q9BYS1 174 aa3.76□□□□□ -1.81
CCDC6-202ENST00000491922 TGP01266 2768 aa3.76□□□□□ -1.81
CCDC6-202ENST00000491922 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
CCDC6-202ENST00000491922 IGLV7-43P04211 117 aa3.75□□□□□ -1.81
CCDC6-202ENST00000491922 SPINK6Q6UWN8 80 aa3.75□□□□□ -1.81
CCDC6-202ENST00000491922 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
CCDC6-202ENST00000491922 RYR3Q15413 4870 aa3.73□□□□□ -1.81
CCDC6-202ENST00000491922 PANO1I0J062 215 aa3.73□□□□□ -1.81
CCDC6-202ENST00000491922 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
CCDC6-202ENST00000491922 MGAM2Q2M2H8 2515 aa3.72□□□□□ -1.81
CCDC6-202ENST00000491922 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
CCDC6-202ENST00000491922 KMT2CQ8NEZ4 4911 aaKnown RBP3.71□□□□□ -1.82
CCDC6-202ENST00000491922 UBE2DNLQ8IWF7 75 aa3.71□□□□□ -1.82
CCDC6-202ENST00000491922 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
CCDC6-202ENST00000491922 PRKDCP78527 4128 aaKnown RBP3.7□□□□□ -1.82
CCDC6-202ENST00000491922 DNAH10Q8IVF4 4471 aa3.7□□□□□ -1.82
CCDC6-202ENST00000491922 LYSTQ99698 3801 aa3.7□□□□□ -1.82
CCDC6-202ENST00000491922 CSMD3Q7Z407 3707 aa3.7□□□□□ -1.82
CCDC6-202ENST00000491922 IGLV5-52A0A0A0MRZ9 124 aa3.7□□□□□ -1.82
CCDC6-202ENST00000491922 A8MUU9 505 aa3.7□□□□□ -1.82
CCDC6-202ENST00000491922 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
CCDC6-202ENST00000491922 PSORS1C2Q9UIG4 136 aa3.69□□□□□ -1.82
CCDC6-202ENST00000491922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
CCDC6-202ENST00000491922 LY6G6CO95867 125 aa3.69□□□□□ -1.82
CCDC6-202ENST00000491922 CIRBP-AS1Q8TBR5 109 aa3.68□□□□□ -1.82
CCDC6-202ENST00000491922 SSBP3-AS1Q7Z2R9 100 aa3.67□□□□□ -1.82
CCDC6-202ENST00000491922 P0C880 135 aa3.66□□□□□ -1.82
CCDC6-202ENST00000491922 XP32Q5T750 250 aa3.66□□□□□ -1.82
CCDC6-202ENST00000491922 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
CCDC6-202ENST00000491922 DNAH3Q8TD57 4116 aa3.65□□□□□ -1.82
CCDC6-202ENST00000491922 KRTAP16-1A8MUX0 517 aa3.65□□□□□ -1.83
CCDC6-202ENST00000491922 H0YAA0 97 aa3.65□□□□□ -1.83
CCDC6-202ENST00000491922 APLNQ9ULZ1 77 aa3.65□□□□□ -1.83
CCDC6-202ENST00000491922 COL7A1Q02388 2944 aa3.64□□□□□ -1.83
CCDC6-202ENST00000491922 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
CCDC6-202ENST00000491922 NBDYA0A0U1RRE5 68 aa3.64□□□□□ -1.83
CCDC6-202ENST00000491922 Q6ZSA8 131 aa3.64□□□□□ -1.83
CCDC6-202ENST00000491922 DNAH9Q9NYC9 4486 aa3.64□□□□□ -1.83
CCDC6-202ENST00000491922 SPINK1P00995 79 aa3.63□□□□□ -1.83
CCDC6-202ENST00000491922 CMYA5Q8N3K9 4069 aa3.62□□□□□ -1.83
CCDC6-202ENST00000491922 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
CCDC6-202ENST00000491922 A0A1B0GU33 70 aa3.6□□□□□ -1.83
CCDC6-202ENST00000491922 K7ERS5 55 aa3.59□□□□□ -1.83
CCDC6-202ENST00000491922 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.83
CCDC6-202ENST00000491922 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.83
CCDC6-202ENST00000491922 A0A087WTM6 91 aa3.59□□□□□ -1.83
CCDC6-202ENST00000491922 H1FX-AS1Q4G0G2 97 aa3.59□□□□□ -1.83
CCDC6-202ENST00000491922 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.84
CCDC6-202ENST00000491922 Q8N1X5 172 aa3.58□□□□□ -1.84
CCDC6-202ENST00000491922 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
CCDC6-202ENST00000491922 RYR2Q92736 4967 aa3.56□□□□□ -1.84
CCDC6-202ENST00000491922 FRAS1Q86XX4 4008 aa3.55□□□□□ -1.84
CCDC6-202ENST00000491922 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
CCDC6-202ENST00000491922 C20orf166-AS1Q96NR2 134 aa3.54□□□□□ -1.84
CCDC6-202ENST00000491922 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
CCDC6-202ENST00000491922 HECTD4Q9Y4D8 3996 aa3.54□□□□□ -1.84
CCDC6-202ENST00000491922 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
CCDC6-202ENST00000491922 HERC2O95714 4834 aa3.54□□□□□ -1.84
CCDC6-202ENST00000491922 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
CCDC6-202ENST00000491922 HYDINQ4G0P3 5121 aa3.53□□□□□ -1.84
CCDC6-202ENST00000491922 DNAH7Q8WXX0 4024 aa3.52□□□□□ -1.85
CCDC6-202ENST00000491922 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
CCDC6-202ENST00000491922 NUPR2A6NF83 97 aa3.52□□□□□ -1.85
CCDC6-202ENST00000491922 STAB2Q8WWQ8 2551 aa3.52□□□□□ -1.85
CCDC6-202ENST00000491922 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
CCDC6-202ENST00000491922 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
CCDC6-202ENST00000491922 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
CCDC6-202ENST00000491922 DNAH17Q9UFH2 4485 aa3.47□□□□□ -1.85
CCDC6-202ENST00000491922 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
CCDC6-202ENST00000491922 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
CCDC6-202ENST00000491922 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
CCDC6-202ENST00000491922 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
CCDC6-202ENST00000491922 PLECQ15149 4684 aaKnown RBP3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms