RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CHD6Q8TD26 2715 aa2.62□□□□□ -1.99
RTN4-215ENST00000491592 NAV2Q8IVL1 2488 aa2.62□□□□□ -1.99
RTN4-215ENST00000491592 ACYP2P14621 99 aa2.62□□□□□ -1.99
RTN4-215ENST00000491592 SPINK7P58062 85 aa2.62□□□□□ -1.99
RTN4-215ENST00000491592 LRRK2Q5S007 2527 aa2.62□□□□□ -1.99
RTN4-215ENST00000491592 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
RTN4-215ENST00000491592 PRLHP81277 87 aa2.61□□□□□ -1.99
RTN4-215ENST00000491592 PCOTHQ58A44 107 aa2.61□□□□□ -1.99
RTN4-215ENST00000491592 MRPL34Q9BQ48 92 aaKnown RBP2.61□□□□□ -1.99
RTN4-215ENST00000491592 ITPR1Q14643 2758 aa2.61□□□□□ -1.99
RTN4-215ENST00000491592 SONP18583 2426 aaKnown RBP2.61□□□□□ -1.99
RTN4-215ENST00000491592 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
RTN4-215ENST00000491592 SETXQ7Z333 2677 aaKnown RBP2.6□□□□□ -1.99
RTN4-215ENST00000491592 FAM208BQ5VWN6 2430 aa2.59□□□□□ -1.99
RTN4-215ENST00000491592 A0A096LNI7 61 aa2.59□□□□□ -1.99
RTN4-215ENST00000491592 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
RTN4-215ENST00000491592 TPRXLQ17RH7 258 aa2.59□□□□□ -1.99
RTN4-215ENST00000491592 Q96NJ1 140 aa2.59□□□□□ -1.99
RTN4-215ENST00000491592 ASH1LQ9NR48 2969 aaKnown RBP2.59□□□□□ -2
RTN4-215ENST00000491592 CELSR1Q9NYQ6 3014 aa2.59□□□□□ -2
RTN4-215ENST00000491592 TEX15Q9BXT5 2789 aa2.58□□□□□ -2
RTN4-215ENST00000491592 ASPMQ8IZT6 3477 aa2.58□□□□□ -2
RTN4-215ENST00000491592 SPACA4Q8TDM5 124 aa2.57□□□□□ -2
RTN4-215ENST00000491592 EPG5Q9HCE0 2579 aa2.57□□□□□ -2
RTN4-215ENST00000491592 MXRA5Q9NR99 2828 aa2.56□□□□□ -2
RTN4-215ENST00000491592 PKD1L2Q7Z442 2459 aa2.56□□□□□ -2
RTN4-215ENST00000491592 A0A1B0GU69 56 aa2.56□□□□□ -2
RTN4-215ENST00000491592 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
RTN4-215ENST00000491592 APCP25054 2843 aa2.56□□□□□ -2
RTN4-215ENST00000491592 POLQO75417 2590 aa2.55□□□□□ -2
RTN4-215ENST00000491592 NBDYA0A0U1RRE5 68 aa2.55□□□□□ -2
RTN4-215ENST00000491592 CHD8Q9HCK8 2581 aa2.55□□□□□ -2
RTN4-215ENST00000491592 ITPR3Q14573 2671 aa2.55□□□□□ -2
RTN4-215ENST00000491592 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
RTN4-215ENST00000491592 MUC3AQ02505 3323 aa2.54□□□□□ -2
RTN4-215ENST00000491592 INE1O15225 51 aa2.54□□□□□ -2
RTN4-215ENST00000491592 ZANQ9Y493 2812 aa2.54□□□□□ -2
RTN4-215ENST00000491592 SETD2Q9BYW2 2564 aaPredicted RBP2.54□□□□□ -2
RTN4-215ENST00000491592 CCDC168Q8NDH2 2452 aa2.53□□□□□ -2
RTN4-215ENST00000491592 F8P00451 2351 aa2.53□□□□□ -2
RTN4-215ENST00000491592 GCN1Q92616 2671 aaKnown RBP2.53□□□□□ -2
RTN4-215ENST00000491592 SPTBN4Q9H254 2564 aa2.53□□□□□ -2
RTN4-215ENST00000491592 A0A087WTM6 91 aa2.53□□□□□ -2
RTN4-215ENST00000491592 ZFHX3Q15911 3703 aa2.53□□□□□ -2.01
RTN4-215ENST00000491592 UTP20O75691 2785 aaKnown RBP2.52□□□□□ -2.01
RTN4-215ENST00000491592 CACNA1AO00555 2505 aa2.52□□□□□ -2.01
RTN4-215ENST00000491592 KMT2BQ9UMN6 2715 aaPredicted RBP2.52□□□□□ -2.01
RTN4-215ENST00000491592 RELNP78509 3460 aa2.52□□□□□ -2.01
RTN4-215ENST00000491592 COL12A1Q99715 3063 aa2.52□□□□□ -2.01
RTN4-215ENST00000491592 SVEP1Q4LDE5 3571 aa2.51□□□□□ -2.01
RTN4-215ENST00000491592 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
RTN4-215ENST00000491592 MYO18BQ8IUG5 2567 aa2.51□□□□□ -2.01
RTN4-215ENST00000491592 CELSR2Q9HCU4 2923 aa2.51□□□□□ -2.01
RTN4-215ENST00000491592 FLNAP21333 2647 aaKnown RBP2.51□□□□□ -2.01
RTN4-215ENST00000491592 MTORP42345 2549 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 ACANP16112 2415 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 FBN2P35556 2912 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 LAMA5O15230 3695 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 SSBP3-AS1Q7Z2R9 100 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 SMR3AQ99954 134 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 PIEZO1Q92508 2521 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 NBEAL2Q6ZNJ1 2754 aa2.5□□□□□ -2.01
RTN4-215ENST00000491592 UBE2DNLQ8IWF7 75 aa2.49□□□□□ -2.01
RTN4-215ENST00000491592 UNC79Q9P2D8 2635 aa2.49□□□□□ -2.01
RTN4-215ENST00000491592 CFAP46Q8IYW2 2715 aa2.48□□□□□ -2.01
RTN4-215ENST00000491592 J3QKU1 62 aa2.48□□□□□ -2.01
RTN4-215ENST00000491592 K7EIL1 84 aa2.48□□□□□ -2.01
RTN4-215ENST00000491592 LINC00304Q8N9R0 145 aa2.48□□□□□ -2.01
RTN4-215ENST00000491592 ZNF462Q96JM2 2506 aa2.48□□□□□ -2.01
RTN4-215ENST00000491592 FLNCQ14315 2725 aa2.48□□□□□ -2.01
RTN4-215ENST00000491592 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
RTN4-215ENST00000491592 IGSF10Q6WRI0 2623 aa2.46□□□□□ -2.02
RTN4-215ENST00000491592 KRTAP13-2Q52LG2 175 aa2.46□□□□□ -2.02
RTN4-215ENST00000491592 SPINK6Q6UWN8 80 aa2.46□□□□□ -2.02
RTN4-215ENST00000491592 APLNQ9ULZ1 77 aa2.46□□□□□ -2.02
RTN4-215ENST00000491592 NF1P21359 2839 aa2.45□□□□□ -2.02
RTN4-215ENST00000491592 LY6G6CO95867 125 aa2.45□□□□□ -2.02
RTN4-215ENST00000491592 Q6ZRN7 208 aaPredicted RBP2.44□□□□□ -2.02
RTN4-215ENST00000491592 VPS13CQ709C8 3753 aa2.43□□□□□ -2.02
RTN4-215ENST00000491592 UBR5O95071 2799 aaPredicted RBP2.43□□□□□ -2.02
RTN4-215ENST00000491592 HIVEP1P15822 2718 aa2.43□□□□□ -2.02
RTN4-215ENST00000491592 TENM2Q9NT68 2774 aa2.43□□□□□ -2.02
RTN4-215ENST00000491592 AKAP9Q99996 3911 aa2.42□□□□□ -2.02
RTN4-215ENST00000491592 ALMS1Q8TCU4 4167 aa2.41□□□□□ -2.02
RTN4-215ENST00000491592 PDZD2O15018 2839 aa2.4□□□□□ -2.03
RTN4-215ENST00000491592 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
RTN4-215ENST00000491592 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
RTN4-215ENST00000491592 ANK3Q12955 4377 aaKnown RBP2.4□□□□□ -2.03
RTN4-215ENST00000491592 CENPEQ02224 2701 aa2.4□□□□□ -2.03
RTN4-215ENST00000491592 TEP1Q99973 2627 aaKnown RBP2.39□□□□□ -2.03
RTN4-215ENST00000491592 USP24Q9UPU5 2620 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 CSMD2Q7Z408 3487 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 NBPF19A0A087WUL8 3843 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 H0YAA0 97 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 ATRQ13535 2644 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 Q6ZSA8 131 aa2.38□□□□□ -2.03
RTN4-215ENST00000491592 NIPBLQ6KC79 2804 aaeCLIP2.38□□□□□ -2.03
RTN4-215ENST00000491592 KRTAP10-1P60331 282 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms