RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 FXYD2P54710 66 aa4.22□□□□□ -1.73
APP-216ENST00000491395 VAMP8Q9BV40 100 aa4.22□□□□□ -1.73
APP-216ENST00000491395 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
APP-216ENST00000491395 TRBV20-1A0A075B6N2 111 aa4.2□□□□□ -1.74
APP-216ENST00000491395 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
APP-216ENST00000491395 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
APP-216ENST00000491395 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
APP-216ENST00000491395 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
APP-216ENST00000491395 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
APP-216ENST00000491395 C9JAW5 83 aa4.19□□□□□ -1.74
APP-216ENST00000491395 IGKV4-1P06312 121 aa4.19□□□□□ -1.74
APP-216ENST00000491395 LINC00313P59037 77 aa4.19□□□□□ -1.74
APP-216ENST00000491395 ANKRD29Q8N6D5 301 aa4.19□□□□□ -1.74
APP-216ENST00000491395 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
APP-216ENST00000491395 K7ERJ3 54 aa4.18□□□□□ -1.74
APP-216ENST00000491395 NDUFS5O43920 106 aa4.18□□□□□ -1.74
APP-216ENST00000491395 DEFB116Q30KQ4 102 aa4.18□□□□□ -1.74
APP-216ENST00000491395 COL5A1-AS1Q5SY13 56 aa4.18□□□□□ -1.74
APP-216ENST00000491395 ORMDL1Q9P0S3 153 aa4.17□□□□□ -1.74
APP-216ENST00000491395 DNAL4O96015 105 aa4.16□□□□□ -1.74
APP-216ENST00000491395 ANAPC13Q9BS18 74 aa4.16□□□□□ -1.74
APP-216ENST00000491395 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
APP-216ENST00000491395 IGHV6-1A0A0B4J1U7 121 aa4.15□□□□□ -1.75
APP-216ENST00000491395 MT2AP02795 61 aa4.15□□□□□ -1.75
APP-216ENST00000491395 HSD52Q0P140 79 aa4.15□□□□□ -1.75
APP-216ENST00000491395 GTF2H5Q6ZYL4 71 aa4.15□□□□□ -1.75
APP-216ENST00000491395 H3BQ85 93 aa4.14□□□□□ -1.75
APP-216ENST00000491395 TMEM256-PLSCR3K7ERE1 68 aa4.14□□□□□ -1.75
APP-216ENST00000491395 TRACP01848 142 aa4.14□□□□□ -1.75
APP-216ENST00000491395 CCKP06307 115 aa4.14□□□□□ -1.75
APP-216ENST00000491395 HRES1P13985 223 aa4.14□□□□□ -1.75
APP-216ENST00000491395 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
APP-216ENST00000491395 C8orf87E5RJ46 101 aa4.13□□□□□ -1.75
APP-216ENST00000491395 PSPHP1O15172 72 aa4.13□□□□□ -1.75
APP-216ENST00000491395 COX6CP09669 75 aa4.13□□□□□ -1.75
APP-216ENST00000491395 PYY3Q5JQD4 70 aa4.13□□□□□ -1.75
APP-216ENST00000491395 LYRM7Q5U5X0 104 aa4.13□□□□□ -1.75
APP-216ENST00000491395 IMUPQ9GZP8 106 aa4.13□□□□□ -1.75
APP-216ENST00000491395 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
APP-216ENST00000491395 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
APP-216ENST00000491395 MT1FP04733 61 aa4.11□□□□□ -1.75
APP-216ENST00000491395 RBM12B-AS1Q9P1G2 102 aa4.11□□□□□ -1.75
APP-216ENST00000491395 A0A1B0GVX0 72 aa4.1□□□□□ -1.75
APP-216ENST00000491395 SCGB1C2P0DMR2 95 aa4.1□□□□□ -1.75
APP-216ENST00000491395 RBM3P98179 157 aaKnown RBP4.1□□□□□ -1.75
APP-216ENST00000491395 LCE2BO14633 110 aa4.09□□□□□ -1.75
APP-216ENST00000491395 MP68P56378 58 aa4.09□□□□□ -1.75
APP-216ENST00000491395 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
APP-216ENST00000491395 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
APP-216ENST00000491395 BAALC-AS2P0C853 105 aa4.08□□□□□ -1.76
APP-216ENST00000491395 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
APP-216ENST00000491395 DSCR8Q96T75 97 aa4.08□□□□□ -1.76
APP-216ENST00000491395 UQCR10Q9UDW1 63 aa4.08□□□□□ -1.76
APP-216ENST00000491395 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
APP-216ENST00000491395 SPINK7P58062 85 aa4.06□□□□□ -1.76
APP-216ENST00000491395 Q6ZQT0 140 aa4.05□□□□□ -1.76
APP-216ENST00000491395 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
APP-216ENST00000491395 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
APP-216ENST00000491395 PRR15Q8IV56 129 aa4.04□□□□□ -1.76
APP-216ENST00000491395 NDUFB1O75438 58 aa4.03□□□□□ -1.76
APP-216ENST00000491395 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
APP-216ENST00000491395 NAA38Q9BRA0 125 aaKnown RBP4.02□□□□□ -1.77
APP-216ENST00000491395 C8orf17Q9NRJ1 99 aa4.02□□□□□ -1.77
APP-216ENST00000491395 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
APP-216ENST00000491395 IGKV3D-7A0A0C4DH55 119 aa4□□□□□ -1.77
APP-216ENST00000491395 A8MWP4 228 aa4□□□□□ -1.77
APP-216ENST00000491395 WFDC13Q8IUB5 93 aa4□□□□□ -1.77
APP-216ENST00000491395 OCR1Q9BZK8 76 aa4□□□□□ -1.77
APP-216ENST00000491395 JMJD7-PLA2G4BH0Y9G9 81 aa3.99□□□□□ -1.77
APP-216ENST00000491395 ATXN8Q156A1 80 aa3.99□□□□□ -1.77
APP-216ENST00000491395 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
APP-216ENST00000491395 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
APP-216ENST00000491395 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
APP-216ENST00000491395 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
APP-216ENST00000491395 A0A1B0GW54 56 aa3.97□□□□□ -1.77
APP-216ENST00000491395 PDE6GP18545 87 aa3.97□□□□□ -1.77
APP-216ENST00000491395 TMEM258P61165 79 aa3.96□□□□□ -1.78
APP-216ENST00000491395 NREPQ16612 68 aa3.96□□□□□ -1.78
APP-216ENST00000491395 A8MUN3 132 aa3.95□□□□□ -1.78
APP-216ENST00000491395 TAX1BP3O14907 124 aa3.95□□□□□ -1.78
APP-216ENST00000491395 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
APP-216ENST00000491395 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
APP-216ENST00000491395 LCA10Q71F78 164 aa3.94□□□□□ -1.78
APP-216ENST00000491395 TMEM254Q8TBM7 123 aa3.94□□□□□ -1.78
APP-216ENST00000491395 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
APP-216ENST00000491395 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
APP-216ENST00000491395 CCDC179H3BU77 68 aa3.92□□□□□ -1.78
APP-216ENST00000491395 H1FX-AS1Q4G0G2 97 aa3.92□□□□□ -1.78
APP-216ENST00000491395 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
APP-216ENST00000491395 FAM236AA0A1B0GUQ0 79 aa3.91□□□□□ -1.78
APP-216ENST00000491395 FAM236BA0A1B0GV22 79 aa3.91□□□□□ -1.78
APP-216ENST00000491395 hDV103S1A0JD37 113 aa3.91□□□□□ -1.78
APP-216ENST00000491395 K7EQZ3 153 aa3.91□□□□□ -1.78
APP-216ENST00000491395 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
APP-216ENST00000491395 UQCRQO14949 82 aa3.9□□□□□ -1.79
APP-216ENST00000491395 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
APP-216ENST00000491395 CXCL6P80162 114 aa3.89□□□□□ -1.79
APP-216ENST00000491395 Q5W150 140 aa3.89□□□□□ -1.79
APP-216ENST00000491395 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
APP-216ENST00000491395 BPY2O14599 106 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms