RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 C7orf65Q6ZTY9 151 aa11.67□□□□□ -0.54
SNAPC3-206ENST00000490969 KRTAP13-1Q8IUC0 172 aa11.67□□□□□ -0.54
SNAPC3-206ENST00000490969 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
SNAPC3-206ENST00000490969 A0A1B0GVX0 72 aa11.64□□□□□ -0.55
SNAPC3-206ENST00000490969 C14orf177Q52M58 125 aa11.64□□□□□ -0.55
SNAPC3-206ENST00000490969 MRPL34Q9BQ48 92 aaKnown RBP11.62□□□□□ -0.55
SNAPC3-206ENST00000490969 NBDYA0A0U1RRE5 68 aa11.58□□□□□ -0.56
SNAPC3-206ENST00000490969 CDK2AP2O75956 126 aa11.58□□□□□ -0.56
SNAPC3-206ENST00000490969 PANO1I0J062 215 aa11.57□□□□□ -0.56
SNAPC3-206ENST00000490969 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
SNAPC3-206ENST00000490969 A0A087X002 238 aa11.55□□□□□ -0.56
SNAPC3-206ENST00000490969 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
SNAPC3-206ENST00000490969 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
SNAPC3-206ENST00000490969 LINC00483Q53H64 154 aa11.54□□□□□ -0.56
SNAPC3-206ENST00000490969 Q6ZRN7 208 aaPredicted RBP11.53□□□□□ -0.56
SNAPC3-206ENST00000490969 WWC2-AS2Q96NR7 200 aa11.48□□□□□ -0.57
SNAPC3-206ENST00000490969 Q5W150 140 aa11.47□□□□□ -0.57
SNAPC3-206ENST00000490969 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.58
SNAPC3-206ENST00000490969 HYDINQ4G0P3 5121 aa11.44□□□□□ -0.58
SNAPC3-206ENST00000490969 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
SNAPC3-206ENST00000490969 ZNF706Q9Y5V0 76 aaPredicted RBP11.44□□□□□ -0.58
SNAPC3-206ENST00000490969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.43□□□□□ -0.58
SNAPC3-206ENST00000490969 ACYP2P14621 99 aa11.43□□□□□ -0.58
SNAPC3-206ENST00000490969 SPACA4Q8TDM5 124 aa11.42□□□□□ -0.58
SNAPC3-206ENST00000490969 HECTD4Q9Y4D8 3996 aa11.41□□□□□ -0.58
SNAPC3-206ENST00000490969 LY6G6CO95867 125 aa11.41□□□□□ -0.58
SNAPC3-206ENST00000490969 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
SNAPC3-206ENST00000490969 LINC00313P59037 77 aa11.41□□□□□ -0.58
SNAPC3-206ENST00000490969 SPINK6Q6UWN8 80 aa11.38□□□□□ -0.59
SNAPC3-206ENST00000490969 DNAH17Q9UFH2 4485 aa11.36□□□□□ -0.59
SNAPC3-206ENST00000490969 PRAC1Q96KF2 57 aa11.35□□□□□ -0.59
SNAPC3-206ENST00000490969 A0A087WTM6 91 aa11.34□□□□□ -0.59
SNAPC3-206ENST00000490969 DMAC1Q96GE9 116 aa11.34□□□□□ -0.59
SNAPC3-206ENST00000490969 PSORS1C2Q9UIG4 136 aa11.33□□□□□ -0.6
SNAPC3-206ENST00000490969 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
SNAPC3-206ENST00000490969 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
SNAPC3-206ENST00000490969 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
SNAPC3-206ENST00000490969 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
SNAPC3-206ENST00000490969 A0A1B0GU69 56 aa11.29□□□□□ -0.6
SNAPC3-206ENST00000490969 ZNF861PO60384 105 aa11.29□□□□□ -0.6
SNAPC3-206ENST00000490969 C8orf87E5RJ46 101 aa11.28□□□□□ -0.6
SNAPC3-206ENST00000490969 ADM2Q7Z4H4 148 aa11.28□□□□□ -0.6
SNAPC3-206ENST00000490969 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
SNAPC3-206ENST00000490969 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
SNAPC3-206ENST00000490969 DNAH11Q96DT5 4516 aa11.25□□□□□ -0.61
SNAPC3-206ENST00000490969 SPATA8Q6RVD6 105 aa11.25□□□□□ -0.61
SNAPC3-206ENST00000490969 SACSQ9NZJ4 4579 aa11.23□□□□□ -0.61
SNAPC3-206ENST00000490969 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
SNAPC3-206ENST00000490969 DNAH5Q8TE73 4624 aa11.22□□□□□ -0.61
SNAPC3-206ENST00000490969 RTL8CO15255 209 aa11.22□□□□□ -0.61
SNAPC3-206ENST00000490969 CIRBP-AS1Q8TBR5 109 aa11.22□□□□□ -0.61
SNAPC3-206ENST00000490969 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.62
SNAPC3-206ENST00000490969 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
SNAPC3-206ENST00000490969 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
SNAPC3-206ENST00000490969 KRTAP10-2P60368 255 aa11.16□□□□□ -0.62
SNAPC3-206ENST00000490969 MIR22HGQ0VDD5 57 aa11.16□□□□□ -0.62
SNAPC3-206ENST00000490969 PKD1P98161 4303 aa11.16□□□□□ -0.62
SNAPC3-206ENST00000490969 IGKV2-30P06310 120 aa11.15□□□□□ -0.62
SNAPC3-206ENST00000490969 UQCR11O14957 56 aa11.14□□□□□ -0.63
SNAPC3-206ENST00000490969 LINC01554Q52M75 96 aa11.14□□□□□ -0.63
SNAPC3-206ENST00000490969 IGLV7-43P04211 117 aa11.08□□□□□ -0.64
SNAPC3-206ENST00000490969 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
SNAPC3-206ENST00000490969 PKHD1P08F94 4074 aa11.06□□□□□ -0.64
SNAPC3-206ENST00000490969 KMT2CQ8NEZ4 4911 aaKnown RBP11.06□□□□□ -0.64
SNAPC3-206ENST00000490969 LRP1BQ9NZR2 4599 aa10.99□□□□□ -0.65
SNAPC3-206ENST00000490969 KRTAP16-1A8MUX0 517 aa10.99□□□□□ -0.65
SNAPC3-206ENST00000490969 KRTAP10-1P60331 282 aa10.99□□□□□ -0.65
SNAPC3-206ENST00000490969 H3BS24 57 aa10.98□□□□□ -0.65
SNAPC3-206ENST00000490969 IGKV2D-30A0A075B6S6 120 aa10.98□□□□□ -0.65
SNAPC3-206ENST00000490969 RYR2Q92736 4967 aa10.96□□□□□ -0.66
SNAPC3-206ENST00000490969 CSAG1Q6PB30 78 aa10.95□□□□□ -0.66
SNAPC3-206ENST00000490969 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
SNAPC3-206ENST00000490969 Q6ZSA8 131 aa10.87□□□□□ -0.67
SNAPC3-206ENST00000490969 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
SNAPC3-206ENST00000490969 VPS13BQ7Z7G8 4022 aa10.84□□□□□ -0.67
SNAPC3-206ENST00000490969 SPINK1P00995 79 aa10.83□□□□□ -0.68
SNAPC3-206ENST00000490969 RYR3Q15413 4870 aa10.78□□□□□ -0.68
SNAPC3-206ENST00000490969 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
SNAPC3-206ENST00000490969 Q8N1X5 172 aa10.76□□□□□ -0.69
SNAPC3-206ENST00000490969 FAT1Q14517 4588 aa10.7□□□□□ -0.7
SNAPC3-206ENST00000490969 APOBP04114 4563 aaKnown RBP10.7□□□□□ -0.7
SNAPC3-206ENST00000490969 H0YAA0 97 aa10.68□□□□□ -0.7
SNAPC3-206ENST00000490969 A8MUU9 505 aa10.67□□□□□ -0.7
SNAPC3-206ENST00000490969 KRTAP1-4P0C5Y4 121 aa10.65□□□□□ -0.7
SNAPC3-206ENST00000490969 SMR3BP02814 79 aaPredicted RBP10.64□□□□□ -0.71
SNAPC3-206ENST00000490969 TYMSOSQ8TAI1 123 aa10.6□□□□□ -0.71
SNAPC3-206ENST00000490969 LINC00304Q8N9R0 145 aa10.6□□□□□ -0.71
SNAPC3-206ENST00000490969 KRTAP25-1Q3LHN0 102 aa10.59□□□□□ -0.71
SNAPC3-206ENST00000490969 A0A1B0GU33 70 aa10.55□□□□□ -0.72
SNAPC3-206ENST00000490969 H1FX-AS1Q4G0G2 97 aa10.49□□□□□ -0.73
SNAPC3-206ENST00000490969 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.73
SNAPC3-206ENST00000490969 ROMO1P60602 79 aa10.45□□□□□ -0.74
SNAPC3-206ENST00000490969 KRTAP3-1Q9BYR8 98 aa10.45□□□□□ -0.74
SNAPC3-206ENST00000490969 HSPG2P98160 4391 aa10.44□□□□□ -0.74
SNAPC3-206ENST00000490969 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.74
SNAPC3-206ENST00000490969 KRTAP17-1Q9BYP8 105 aa10.39□□□□□ -0.75
SNAPC3-206ENST00000490969 KIAA1109Q2LD37 5005 aa10.37□□□□□ -0.75
SNAPC3-206ENST00000490969 FLG2Q5D862 2391 aaPredicted RBP10.35□□□□□ -0.75
SNAPC3-206ENST00000490969 RPS29P62273 56 aaKnown RBP10.35□□□□□ -0.75
SNAPC3-206ENST00000490969 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms