RNA–Protein interactions for RNA: ENST00000490914.1

SSB-211, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-211ENST00000490914 RICTORQ6R327 1708 aa-0.11□□□□□ -2.43
SSB-211ENST00000490914 LAMA1P25391 3075 aa-0.11□□□□□ -2.43
SSB-211ENST00000490914 THOC2Q8NI27 1593 aaKnown RBP-0.11□□□□□ -2.43
SSB-211ENST00000490914 AKAP9Q99996 3911 aa-0.11□□□□□ -2.43
SSB-211ENST00000490914 DMXL1Q9Y485 3027 aa-0.11□□□□□ -2.43
SSB-211ENST00000490914 PLCH1Q4KWH8 1693 aa-0.11□□□□□ -2.43
SSB-211ENST00000490914 CFAP43Q8NDM7 1665 aa-0.11□□□□□ -2.43
SSB-211ENST00000490914 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 UGGT2Q9NYU1 1516 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 WDR87Q6ZQQ6 2873 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 MT4P47944 62 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 SPRR2FQ96RM1 72 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 S4R3F8 94 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 ABCA8O94911 1581 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 DIP2AQ14689 1571 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 MXRA5Q9NR99 2828 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 CEP290O15078 2479 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 COL12A1Q99715 3063 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 LAMA5O15230 3695 aa-0.12□□□□□ -2.43
SSB-211ENST00000490914 NBPF19A0A087WUL8 3843 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 SVEP1Q4LDE5 3571 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 ITPR3Q14573 2671 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 LINC01549A6NIU2 74 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 FCER1GP30273 86 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 WT1-ASQ06250 92 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 NCBP2-AS2Q69YL0 99 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 C6orf48Q9UBA6 75 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 LRRK2Q5S007 2527 aa-0.13□□□□□ -2.43
SSB-211ENST00000490914 UTP20O75691 2785 aaKnown RBP-0.13□□□□□ -2.43
SSB-211ENST00000490914 A0A0C4DFX4 3053 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 ACACAQ13085 2346 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 NBEAL2Q6ZNJ1 2754 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 TEX15Q9BXT5 2789 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 LAMA3Q16787 3333 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 RANBP2P49792 3224 aaKnown RBP-0.14□□□□□ -2.43
SSB-211ENST00000490914 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
SSB-211ENST00000490914 H3BUA1 57 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 K7EMI3 77 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 MT1AP04731 61 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 KRTAP19-5Q3LI72 72 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 HIVEP1P15822 2718 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 C5orf42Q9H799 3197 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 TEP1Q99973 2627 aaKnown RBP-0.14□□□□□ -2.43
SSB-211ENST00000490914 KIAA0586Q9BVV6 1533 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 SCN11AQ9UI33 1791 aa-0.14□□□□□ -2.43
SSB-211ENST00000490914 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.15□□□□□ -2.43
SSB-211ENST00000490914 FRYQ5TBA9 3013 aa-0.15□□□□□ -2.43
SSB-211ENST00000490914 GCN1Q92616 2671 aaKnown RBP-0.15□□□□□ -2.43
SSB-211ENST00000490914 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
SSB-211ENST00000490914 CHD7Q9P2D1 2997 aa-0.15□□□□□ -2.43
SSB-211ENST00000490914 MGAQ8IWI9 3026 aa-0.15□□□□□ -2.43
SSB-211ENST00000490914 CDC42BPGQ6DT37 1551 aa-0.15□□□□□ -2.43
SSB-211ENST00000490914 DNMBPQ6XZF7 1577 aa-0.15□□□□□ -2.43
SSB-211ENST00000490914 BPTFQ12830 3046 aa-0.16□□□□□ -2.43
SSB-211ENST00000490914 EYSQ5T1H1 3165 aa-0.16□□□□□ -2.43
SSB-211ENST00000490914 NBEAQ8NFP9 2946 aa-0.16□□□□□ -2.43
SSB-211ENST00000490914 ANKRD11Q6UB99 2663 aaPredicted RBP-0.16□□□□□ -2.43
SSB-211ENST00000490914 TRRAPQ9Y4A5 3859 aa-0.16□□□□□ -2.43
SSB-211ENST00000490914 ABCC6O95255 1503 aa-0.16□□□□□ -2.43
SSB-211ENST00000490914 RPS27P42677 84 aaKnown RBP-0.16□□□□□ -2.44
SSB-211ENST00000490914 SERF2P84101 59 aa-0.16□□□□□ -2.44
SSB-211ENST00000490914 RPS27LQ71UM5 84 aaKnown RBP-0.16□□□□□ -2.44
SSB-211ENST00000490914 ADGRG4Q8IZF6 3080 aa-0.16□□□□□ -2.44
SSB-211ENST00000490914 NIPBLQ6KC79 2804 aaeCLIP-0.16□□□□□ -2.44
SSB-211ENST00000490914 ITSN1Q15811 1721 aa-0.16□□□□□ -2.44
SSB-211ENST00000490914 FAM186AA6NE01 2351 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 CRYBG3Q68DQ2 2970 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 ASXL1Q8IXJ9 1541 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 SFTA3P0C7M3 94 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 MT1HP80294 61 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 DEFB110Q30KQ9 67 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 NMES1Q9C002 83 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 MYO5CQ9NQX4 1742 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 MGAM2Q2M2H8 2515 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.17□□□□□ -2.44
SSB-211ENST00000490914 DMXL2Q8TDJ6 3036 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 SRCAPQ6ZRS2 3230 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 CFAP54Q96N23 3096 aa-0.17□□□□□ -2.44
SSB-211ENST00000490914 ACACBO00763 2458 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 CUBNO60494 3623 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 TJP1Q07157 1748 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 PRUNE2Q8WUY3 3088 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 COL6A5A8TX70 2615 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 A0A087WWC5 75 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 SMR3BP02814 79 aaPredicted RBP-0.18□□□□□ -2.44
SSB-211ENST00000490914 MT1XP80297 61 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 NOP10Q9NPE3 64 aaKnown RBP-0.18□□□□□ -2.44
SSB-211ENST00000490914 RNF17Q9BXT8 1623 aaKnown RBP-0.18□□□□□ -2.44
SSB-211ENST00000490914 LRBAP50851 2863 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 ITSN2Q9NZM3 1697 aa-0.18□□□□□ -2.44
SSB-211ENST00000490914 USP9XQ93008 2570 aaPredicted RBP-0.18□□□□□ -2.44
SSB-211ENST00000490914 CCDC168Q8NDH2 2452 aa-0.19□□□□□ -2.44
SSB-211ENST00000490914 INO80Q9ULG1 1556 aaPredicted RBP-0.19□□□□□ -2.44
SSB-211ENST00000490914 CELSR3Q9NYQ7 3312 aa-0.19□□□□□ -2.44
SSB-211ENST00000490914 IQGAP3Q86VI3 1631 aa-0.19□□□□□ -2.44
SSB-211ENST00000490914 FRYLO94915 3013 aa-0.19□□□□□ -2.44
SSB-211ENST00000490914 MT1GP13640 62 aa-0.19□□□□□ -2.44
SSB-211ENST00000490914 KRTAP8-1Q8IUC2 63 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms