RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
SNX12-205ENST00000490561 C8orf87E5RJ46 101 aa7.37□□□□□ -1.23
SNX12-205ENST00000490561 DSCR10P59022 87 aa7.36□□□□□ -1.23
SNX12-205ENST00000490561 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
SNX12-205ENST00000490561 PRR15Q8IV56 129 aa7.36□□□□□ -1.23
SNX12-205ENST00000490561 CDIP1Q9H305 208 aa7.35□□□□□ -1.23
SNX12-205ENST00000490561 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
SNX12-205ENST00000490561 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
SNX12-205ENST00000490561 LINC00313P59037 77 aa7.33□□□□□ -1.24
SNX12-205ENST00000490561 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
SNX12-205ENST00000490561 K7EQZ3 153 aa7.32□□□□□ -1.24
SNX12-205ENST00000490561 C8orf17Q9NRJ1 99 aa7.29□□□□□ -1.24
SNX12-205ENST00000490561 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
SNX12-205ENST00000490561 Q8N9L7 120 aa7.28□□□□□ -1.24
SNX12-205ENST00000490561 HMCN2Q8NDA2 5059 aa7.28□□□□□ -1.24
SNX12-205ENST00000490561 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
SNX12-205ENST00000490561 HCG22E2RYF7 251 aa7.25□□□□□ -1.25
SNX12-205ENST00000490561 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
SNX12-205ENST00000490561 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
SNX12-205ENST00000490561 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
SNX12-205ENST00000490561 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
SNX12-205ENST00000490561 XP32Q5T750 250 aa7.23□□□□□ -1.25
SNX12-205ENST00000490561 CASC2Q6XLA1 102 aa7.23□□□□□ -1.25
SNX12-205ENST00000490561 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
SNX12-205ENST00000490561 KRTAP16-1A8MUX0 517 aa7.21□□□□□ -1.26
SNX12-205ENST00000490561 LCE2DQ5TA82 110 aaPredicted RBP7.21□□□□□ -1.26
SNX12-205ENST00000490561 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
SNX12-205ENST00000490561 MRPL34Q9BQ48 92 aaKnown RBP7.21□□□□□ -1.26
SNX12-205ENST00000490561 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
SNX12-205ENST00000490561 Q75L30 129 aa7.2□□□□□ -1.26
SNX12-205ENST00000490561 A8MUU9 505 aa7.19□□□□□ -1.26
SNX12-205ENST00000490561 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
SNX12-205ENST00000490561 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
SNX12-205ENST00000490561 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
SNX12-205ENST00000490561 A0A087WVE0 104 aa7.15□□□□□ -1.26
SNX12-205ENST00000490561 LPAP08519 4548 aa7.15□□□□□ -1.27
SNX12-205ENST00000490561 NDUFS5O43920 106 aa7.14□□□□□ -1.27
SNX12-205ENST00000490561 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
SNX12-205ENST00000490561 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
SNX12-205ENST00000490561 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
SNX12-205ENST00000490561 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
SNX12-205ENST00000490561 LRP2P98164 4655 aa7.08□□□□□ -1.28
SNX12-205ENST00000490561 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
SNX12-205ENST00000490561 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
SNX12-205ENST00000490561 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
SNX12-205ENST00000490561 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
SNX12-205ENST00000490561 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
SNX12-205ENST00000490561 UQCRQO14949 82 aa7.04□□□□□ -1.28
SNX12-205ENST00000490561 SMIM20Q8N5G0 67 aa7.04□□□□□ -1.28
SNX12-205ENST00000490561 ATOX1O00244 68 aa7.01□□□□□ -1.29
SNX12-205ENST00000490561 OCR1Q9BZK8 76 aa7□□□□□ -1.29
SNX12-205ENST00000490561 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
SNX12-205ENST00000490561 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
SNX12-205ENST00000490561 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.3
SNX12-205ENST00000490561 Q5W150 140 aa6.96□□□□□ -1.3
SNX12-205ENST00000490561 MP68P56378 58 aa6.95□□□□□ -1.3
SNX12-205ENST00000490561 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
SNX12-205ENST00000490561 H0Y9P7 68 aa6.94□□□□□ -1.3
SNX12-205ENST00000490561 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
SNX12-205ENST00000490561 H3BPC8 53 aa6.92□□□□□ -1.3
SNX12-205ENST00000490561 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
SNX12-205ENST00000490561 SPINK7P58062 85 aa6.9□□□□□ -1.3
SNX12-205ENST00000490561 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
SNX12-205ENST00000490561 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
SNX12-205ENST00000490561 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
SNX12-205ENST00000490561 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
SNX12-205ENST00000490561 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
SNX12-205ENST00000490561 C1orf64Q8NEQ6 169 aa6.86□□□□□ -1.31
SNX12-205ENST00000490561 LINC00208Q96KT6 92 aa6.86□□□□□ -1.31
SNX12-205ENST00000490561 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
SNX12-205ENST00000490561 KRTAP4-1Q9BYQ7 146 aa6.85□□□□□ -1.31
SNX12-205ENST00000490561 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
SNX12-205ENST00000490561 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
SNX12-205ENST00000490561 HRES1P13985 223 aa6.81□□□□□ -1.32
SNX12-205ENST00000490561 COX7CP15954 63 aa6.81□□□□□ -1.32
SNX12-205ENST00000490561 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
SNX12-205ENST00000490561 A0A0U1RQV1 116 aa6.79□□□□□ -1.32
SNX12-205ENST00000490561 MPLKIPQ8TAP9 179 aa6.77□□□□□ -1.33
SNX12-205ENST00000490561 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
SNX12-205ENST00000490561 FAM236DA0A1B0GTK5 79 aa6.73□□□□□ -1.33
SNX12-205ENST00000490561 FAM236CP0DP71 79 aa6.73□□□□□ -1.33
SNX12-205ENST00000490561 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
SNX12-205ENST00000490561 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
SNX12-205ENST00000490561 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
SNX12-205ENST00000490561 MUC2Q02817 5179 aa6.72□□□□□ -1.33
SNX12-205ENST00000490561 C4orf26Q17RF5 130 aa6.7□□□□□ -1.34
SNX12-205ENST00000490561 NDUFC1O43677 76 aa6.69□□□□□ -1.34
SNX12-205ENST00000490561 A8MUN3 132 aa6.66□□□□□ -1.34
SNX12-205ENST00000490561 KRTAP19-2Q3LHN2 52 aa6.65□□□□□ -1.34
SNX12-205ENST00000490561 CCDC179H3BU77 68 aa6.63□□□□□ -1.35
SNX12-205ENST00000490561 H1FX-AS1Q4G0G2 97 aa6.63□□□□□ -1.35
SNX12-205ENST00000490561 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
SNX12-205ENST00000490561 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
SNX12-205ENST00000490561 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
SNX12-205ENST00000490561 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.35
SNX12-205ENST00000490561 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
SNX12-205ENST00000490561 H7BZZ5 65 aa6.58□□□□□ -1.36
SNX12-205ENST00000490561 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
SNX12-205ENST00000490561 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
SNX12-205ENST00000490561 ACYP2P14621 99 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms