RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
USP39-216ENST00000490193 TRGC2P03986 189 aa4.13□□□□□ -1.75
USP39-216ENST00000490193 Q6JHZ5 121 aa4.13□□□□□ -1.75
USP39-216ENST00000490193 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
USP39-216ENST00000490193 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
USP39-216ENST00000490193 A8MUU9 505 aa4.12□□□□□ -1.75
USP39-216ENST00000490193 F8WEM9 126 aa4.12□□□□□ -1.75
USP39-216ENST00000490193 CLEC2BQ92478 149 aa4.12□□□□□ -1.75
USP39-216ENST00000490193 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
USP39-216ENST00000490193 IGFL1Q6UW32 110 aa4.11□□□□□ -1.75
USP39-216ENST00000490193 ANKRD29Q8N6D5 301 aa4.11□□□□□ -1.75
USP39-216ENST00000490193 Q96NJ1 140 aa4.11□□□□□ -1.75
USP39-216ENST00000490193 SYS1-DBNDD2H3BUS1 97 aa4.1□□□□□ -1.75
USP39-216ENST00000490193 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
USP39-216ENST00000490193 SPATA45Q537H7 98 aa4.1□□□□□ -1.75
USP39-216ENST00000490193 COPS9Q8WXC6 57 aa4.1□□□□□ -1.75
USP39-216ENST00000490193 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
USP39-216ENST00000490193 LINC00846Q9NV44 126 aa4.1□□□□□ -1.75
USP39-216ENST00000490193 TRAV13-2A0A0B4J235 113 aa4.09□□□□□ -1.75
USP39-216ENST00000490193 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
USP39-216ENST00000490193 LINC01545Q5VT33 79 aa4.09□□□□□ -1.75
USP39-216ENST00000490193 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
USP39-216ENST00000490193 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
USP39-216ENST00000490193 C8orf87E5RJ46 101 aa4.08□□□□□ -1.76
USP39-216ENST00000490193 LST1O00453 97 aa4.08□□□□□ -1.76
USP39-216ENST00000490193 NEBP20929 6669 aa4.08□□□□□ -1.76
USP39-216ENST00000490193 F8W1H4 67 aa4.07□□□□□ -1.76
USP39-216ENST00000490193 BVES-AS1Q5T3Y7 98 aa4.07□□□□□ -1.76
USP39-216ENST00000490193 LINC00575Q6W349 94 aa4.07□□□□□ -1.76
USP39-216ENST00000490193 MPLKIPQ8TAP9 179 aa4.07□□□□□ -1.76
USP39-216ENST00000490193 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
USP39-216ENST00000490193 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
USP39-216ENST00000490193 Q6ZQY7 126 aa4.06□□□□□ -1.76
USP39-216ENST00000490193 hADV29S1A0JD25 119 aa4.05□□□□□ -1.76
USP39-216ENST00000490193 TMEM258P61165 79 aa4.05□□□□□ -1.76
USP39-216ENST00000490193 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
USP39-216ENST00000490193 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
USP39-216ENST00000490193 PPDPFLQ8WWR9 84 aa4.05□□□□□ -1.76
USP39-216ENST00000490193 SPCS1Q9Y6A9 102 aa4.05□□□□□ -1.76
USP39-216ENST00000490193 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
USP39-216ENST00000490193 KRTAP16-1A8MUX0 517 aa4.04□□□□□ -1.76
USP39-216ENST00000490193 UQCRQO14949 82 aa4.04□□□□□ -1.76
USP39-216ENST00000490193 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
USP39-216ENST00000490193 A0A1W2PPM0 123 aa4.03□□□□□ -1.76
USP39-216ENST00000490193 HRES1P13985 223 aa4.03□□□□□ -1.76
USP39-216ENST00000490193 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.03□□□□□ -1.76
USP39-216ENST00000490193 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
USP39-216ENST00000490193 SNCGO76070 127 aa4.02□□□□□ -1.77
USP39-216ENST00000490193 FABP2P12104 132 aa4.02□□□□□ -1.77
USP39-216ENST00000490193 PRR15Q8IV56 129 aa4.02□□□□□ -1.77
USP39-216ENST00000490193 TRIAP1O43715 76 aa4.01□□□□□ -1.77
USP39-216ENST00000490193 TRACP01848 142 aa4.01□□□□□ -1.77
USP39-216ENST00000490193 C3orf79P0CE67 100 aa4.01□□□□□ -1.77
USP39-216ENST00000490193 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
USP39-216ENST00000490193 H3BUT2 72 aa4□□□□□ -1.77
USP39-216ENST00000490193 DSCR10P59022 87 aa4□□□□□ -1.77
USP39-216ENST00000490193 TEN1Q86WV5 123 aa4□□□□□ -1.77
USP39-216ENST00000490193 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
USP39-216ENST00000490193 RAB37Q96AX2 223 aa3.99□□□□□ -1.77
USP39-216ENST00000490193 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
USP39-216ENST00000490193 A0A087WSZ3 146 aa3.97□□□□□ -1.77
USP39-216ENST00000490193 H3BMG7 143 aa3.97□□□□□ -1.77
USP39-216ENST00000490193 LINC00313P59037 77 aa3.97□□□□□ -1.77
USP39-216ENST00000490193 ETDBQ3ZM63 59 aa3.97□□□□□ -1.77
USP39-216ENST00000490193 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
USP39-216ENST00000490193 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
USP39-216ENST00000490193 KRTDAPP60985 99 aa3.96□□□□□ -1.78
USP39-216ENST00000490193 Q6ZVQ6 151 aa3.96□□□□□ -1.78
USP39-216ENST00000490193 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
USP39-216ENST00000490193 NDUFS5O43920 106 aa3.95□□□□□ -1.78
USP39-216ENST00000490193 COX7CP15954 63 aa3.95□□□□□ -1.78
USP39-216ENST00000490193 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
USP39-216ENST00000490193 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
USP39-216ENST00000490193 A8MWP4 228 aa3.94□□□□□ -1.78
USP39-216ENST00000490193 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
USP39-216ENST00000490193 PRO0461Q9UI25 63 aa3.94□□□□□ -1.78
USP39-216ENST00000490193 H3BT86 120 aa3.93□□□□□ -1.78
USP39-216ENST00000490193 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
USP39-216ENST00000490193 IGKV4-1P06312 121 aa3.91□□□□□ -1.78
USP39-216ENST00000490193 A8MUN3 132 aa3.9□□□□□ -1.79
USP39-216ENST00000490193 MP68P56378 58 aa3.9□□□□□ -1.79
USP39-216ENST00000490193 Q8N9P0 234 aaPredicted RBP3.9□□□□□ -1.79
USP39-216ENST00000490193 TRBV7-4A0A0J9YYF1 115 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 H0YGX0 51 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 PSMB2P49721 201 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 SPINK7P58062 85 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 LCA10Q71F78 164 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 FAM218AQ96MZ4 157 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 LINC00472Q9H8W2 130 aa3.88□□□□□ -1.79
USP39-216ENST00000490193 TMEM256-PLSCR3K7ERE1 68 aa3.87□□□□□ -1.79
USP39-216ENST00000490193 K7ERJ3 54 aa3.87□□□□□ -1.79
USP39-216ENST00000490193 C2orf91Q6ZV80 131 aa3.87□□□□□ -1.79
USP39-216ENST00000490193 CEND1Q8N111 149 aa3.87□□□□□ -1.79
USP39-216ENST00000490193 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
USP39-216ENST00000490193 IGHV6-1A0A0B4J1U7 121 aa3.86□□□□□ -1.79
USP39-216ENST00000490193 COX8AP10176 69 aa3.85□□□□□ -1.79
USP39-216ENST00000490193 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
USP39-216ENST00000490193 A0A1B0GVX0 72 aa3.84□□□□□ -1.79
USP39-216ENST00000490193 ATOX1O00244 68 aa3.84□□□□□ -1.79
USP39-216ENST00000490193 DEFB116Q30KQ4 102 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms