RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
USP48-210ENST00000489108 LYRM7Q5U5X0 104 aa7.36□□□□□ -1.23
USP48-210ENST00000489108 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
USP48-210ENST00000489108 Q5VV11 94 aa7.33□□□□□ -1.24
USP48-210ENST00000489108 A0A0B4J2C4 111 aa7.32□□□□□ -1.24
USP48-210ENST00000489108 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
USP48-210ENST00000489108 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
USP48-210ENST00000489108 VPS25Q9BRG1 176 aa7.29□□□□□ -1.24
USP48-210ENST00000489108 ORMDL1Q9P0S3 153 aa7.29□□□□□ -1.24
USP48-210ENST00000489108 IGKV3D-7A0A0C4DH55 119 aa7.28□□□□□ -1.24
USP48-210ENST00000489108 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
USP48-210ENST00000489108 J3KT08 172 aa7.27□□□□□ -1.25
USP48-210ENST00000489108 COX8AP10176 69 aa7.26□□□□□ -1.25
USP48-210ENST00000489108 H3BQ85 93 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 TMEM256-PLSCR3K7ERE1 68 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 TRIAP1O43715 76 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 NDUFB1O75438 58 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 DNAL4O96015 105 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 DSCR8Q96T75 97 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 C8orf17Q9NRJ1 99 aa7.25□□□□□ -1.25
USP48-210ENST00000489108 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
USP48-210ENST00000489108 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
USP48-210ENST00000489108 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
USP48-210ENST00000489108 HIST1H2BLQ99880 126 aa7.22□□□□□ -1.25
USP48-210ENST00000489108 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
USP48-210ENST00000489108 DLEU1O43261 78 aa7.21□□□□□ -1.26
USP48-210ENST00000489108 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
USP48-210ENST00000489108 Q6ZVQ6 151 aa7.19□□□□□ -1.26
USP48-210ENST00000489108 HIST3H2BBQ8N257 126 aa7.19□□□□□ -1.26
USP48-210ENST00000489108 S100A2P29034 98 aa7.17□□□□□ -1.26
USP48-210ENST00000489108 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
USP48-210ENST00000489108 HIGD1BQ9P298 99 aa7.17□□□□□ -1.26
USP48-210ENST00000489108 SPRR2EP22531 72 aa7.16□□□□□ -1.26
USP48-210ENST00000489108 SPRR2BP35325 72 aa7.16□□□□□ -1.26
USP48-210ENST00000489108 SPRR2AP35326 72 aa7.16□□□□□ -1.26
USP48-210ENST00000489108 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
USP48-210ENST00000489108 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
USP48-210ENST00000489108 Q6ZQT0 140 aa7.16□□□□□ -1.26
USP48-210ENST00000489108 CEND1Q8N111 149 aa7.15□□□□□ -1.26
USP48-210ENST00000489108 KRTAP2-2Q9BYT5 123 aa7.15□□□□□ -1.26
USP48-210ENST00000489108 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.26
USP48-210ENST00000489108 C2orf91Q6ZV80 131 aa7.13□□□□□ -1.27
USP48-210ENST00000489108 SPRR2FQ96RM1 72 aa7.13□□□□□ -1.27
USP48-210ENST00000489108 IGKV2D-30A0A075B6S6 120 aa7.12□□□□□ -1.27
USP48-210ENST00000489108 IGKV2-30P06310 120 aa7.12□□□□□ -1.27
USP48-210ENST00000489108 PSMB2P49721 201 aa7.12□□□□□ -1.27
USP48-210ENST00000489108 FXYD2P54710 66 aa7.11□□□□□ -1.27
USP48-210ENST00000489108 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
USP48-210ENST00000489108 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
USP48-210ENST00000489108 A6NJY4 79 aa7.1□□□□□ -1.27
USP48-210ENST00000489108 C9JAW5 83 aa7.09□□□□□ -1.27
USP48-210ENST00000489108 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
USP48-210ENST00000489108 IMUPQ9GZP8 106 aa7.09□□□□□ -1.27
USP48-210ENST00000489108 C4orf26Q17RF5 130 aa7.07□□□□□ -1.28
USP48-210ENST00000489108 TMEM254Q8TBM7 123 aa7.07□□□□□ -1.28
USP48-210ENST00000489108 COX6CP09669 75 aa7.06□□□□□ -1.28
USP48-210ENST00000489108 PRR15Q8IV56 129 aa7.06□□□□□ -1.28
USP48-210ENST00000489108 NDUFS5O43920 106 aa7.05□□□□□ -1.28
USP48-210ENST00000489108 C7orf65Q6ZTY9 151 aa7.05□□□□□ -1.28
USP48-210ENST00000489108 MMP24-AS1A0A0U1RRL7 71 aa7.04□□□□□ -1.28
USP48-210ENST00000489108 Q5W150 140 aa7.04□□□□□ -1.28
USP48-210ENST00000489108 SPATA45Q537H7 98 aa7.03□□□□□ -1.28
USP48-210ENST00000489108 PAM16Q9Y3D7 125 aa7.03□□□□□ -1.28
USP48-210ENST00000489108 K7ERJ3 54 aa7.02□□□□□ -1.29
USP48-210ENST00000489108 KLKP1Q107X0 134 aa7.01□□□□□ -1.29
USP48-210ENST00000489108 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
USP48-210ENST00000489108 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
USP48-210ENST00000489108 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
USP48-210ENST00000489108 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
USP48-210ENST00000489108 S4R3F8 94 aa6.98□□□□□ -1.29
USP48-210ENST00000489108 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
USP48-210ENST00000489108 S100A6P06703 90 aa6.96□□□□□ -1.3
USP48-210ENST00000489108 A0A1B0GW54 56 aa6.95□□□□□ -1.3
USP48-210ENST00000489108 LCA10Q71F78 164 aa6.95□□□□□ -1.3
USP48-210ENST00000489108 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
USP48-210ENST00000489108 SPRR2DP22532 72 aa6.93□□□□□ -1.3
USP48-210ENST00000489108 VAMP8Q9BV40 100 aa6.92□□□□□ -1.3
USP48-210ENST00000489108 NREPQ16612 68 aa6.91□□□□□ -1.3
USP48-210ENST00000489108 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
USP48-210ENST00000489108 LOC110117498A0A087WWA1 95 aa6.9□□□□□ -1.3
USP48-210ENST00000489108 K7EQZ3 153 aa6.9□□□□□ -1.3
USP48-210ENST00000489108 HSD52Q0P140 79 aa6.88□□□□□ -1.31
USP48-210ENST00000489108 JMJD7-PLA2G4BH0Y9G9 81 aa6.87□□□□□ -1.31
USP48-210ENST00000489108 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
USP48-210ENST00000489108 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
USP48-210ENST00000489108 PDE6GP18545 87 aa6.84□□□□□ -1.31
USP48-210ENST00000489108 S100A1P23297 94 aa6.84□□□□□ -1.31
USP48-210ENST00000489108 C14orf132Q9NPU4 83 aa6.83□□□□□ -1.32
USP48-210ENST00000489108 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
USP48-210ENST00000489108 MT1XP80297 61 aa6.79□□□□□ -1.32
USP48-210ENST00000489108 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
USP48-210ENST00000489108 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
USP48-210ENST00000489108 GPR98Q8WXG9 6306 aa6.78□□□□□ -1.32
USP48-210ENST00000489108 CASC2Q6XLA1 102 aa6.76□□□□□ -1.33
USP48-210ENST00000489108 CXCL6P80162 114 aa6.75□□□□□ -1.33
USP48-210ENST00000489108 ATXN8Q156A1 80 aa6.75□□□□□ -1.33
USP48-210ENST00000489108 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
USP48-210ENST00000489108 BPY2O14599 106 aa6.73□□□□□ -1.33
USP48-210ENST00000489108 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
USP48-210ENST00000489108 Q8N9L7 120 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms