RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 UBE2AP49459 152 aa8.07□□□□□ -1.12
CHD1L-208ENST00000488864 Q5VV11 94 aa8.07□□□□□ -1.12
CHD1L-208ENST00000488864 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
CHD1L-208ENST00000488864 FAT1Q14517 4588 aa8.06□□□□□ -1.12
CHD1L-208ENST00000488864 SMR3BP02814 79 aaPredicted RBP8.06□□□□□ -1.12
CHD1L-208ENST00000488864 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
CHD1L-208ENST00000488864 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
CHD1L-208ENST00000488864 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
CHD1L-208ENST00000488864 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.13
CHD1L-208ENST00000488864 A8MWP4 228 aa8.01□□□□□ -1.13
CHD1L-208ENST00000488864 KIAA1109Q2LD37 5005 aa8□□□□□ -1.13
CHD1L-208ENST00000488864 H3BPC8 53 aa8□□□□□ -1.13
CHD1L-208ENST00000488864 HSPG2P98160 4391 aa8□□□□□ -1.13
CHD1L-208ENST00000488864 CHKB-CPT1BH3BT56 60 aa7.99□□□□□ -1.13
CHD1L-208ENST00000488864 PRR15LQ9BU68 103 aa7.98□□□□□ -1.13
CHD1L-208ENST00000488864 MMP24-AS1A0A0U1RRL7 71 aa7.96□□□□□ -1.14
CHD1L-208ENST00000488864 H0Y9J4 135 aa7.96□□□□□ -1.14
CHD1L-208ENST00000488864 SPRR1BP22528 89 aa7.96□□□□□ -1.14
CHD1L-208ENST00000488864 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.14
CHD1L-208ENST00000488864 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
CHD1L-208ENST00000488864 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
CHD1L-208ENST00000488864 RYR1P21817 5038 aa7.95□□□□□ -1.14
CHD1L-208ENST00000488864 COA5Q86WW8 74 aa7.94□□□□□ -1.14
CHD1L-208ENST00000488864 ZNF861PO60384 105 aa7.93□□□□□ -1.14
CHD1L-208ENST00000488864 CDK2AP2O75956 126 aa7.92□□□□□ -1.14
CHD1L-208ENST00000488864 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
CHD1L-208ENST00000488864 PCOTHQ58A44 107 aa7.92□□□□□ -1.14
CHD1L-208ENST00000488864 LCA10Q71F78 164 aa7.91□□□□□ -1.14
CHD1L-208ENST00000488864 CD164Q04900 197 aa7.89□□□□□ -1.15
CHD1L-208ENST00000488864 KRTAP17-1Q9BYP8 105 aa7.89□□□□□ -1.15
CHD1L-208ENST00000488864 Q75L30 129 aa7.88□□□□□ -1.15
CHD1L-208ENST00000488864 Q96NJ1 140 aa7.88□□□□□ -1.15
CHD1L-208ENST00000488864 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
CHD1L-208ENST00000488864 ANAPC11Q9NYG5 84 aa7.88□□□□□ -1.15
CHD1L-208ENST00000488864 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
CHD1L-208ENST00000488864 A6NED7 52 aa7.86□□□□□ -1.15
CHD1L-208ENST00000488864 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
CHD1L-208ENST00000488864 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
CHD1L-208ENST00000488864 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
CHD1L-208ENST00000488864 Q5VSD8 79 aa7.85□□□□□ -1.15
CHD1L-208ENST00000488864 IGLV9-49A0A0B4J1Y8 123 aa7.84□□□□□ -1.15
CHD1L-208ENST00000488864 SPAG11AQ6PDA7 123 aa7.83□□□□□ -1.16
CHD1L-208ENST00000488864 C8orf17Q9NRJ1 99 aa7.82□□□□□ -1.16
CHD1L-208ENST00000488864 BIRC6Q9NR09 4857 aa7.82□□□□□ -1.16
CHD1L-208ENST00000488864 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
CHD1L-208ENST00000488864 ATP11AUNQ6ZP68 121 aa7.81□□□□□ -1.16
CHD1L-208ENST00000488864 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CHD1L-208ENST00000488864 MOBPQ13875 183 aa7.8□□□□□ -1.16
CHD1L-208ENST00000488864 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
CHD1L-208ENST00000488864 NDUFS5O43920 106 aa7.8□□□□□ -1.16
CHD1L-208ENST00000488864 KTN1-AS1Q86SY8 53 aa7.8□□□□□ -1.16
CHD1L-208ENST00000488864 ZNF706Q9Y5V0 76 aaPredicted RBP7.8□□□□□ -1.16
CHD1L-208ENST00000488864 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
CHD1L-208ENST00000488864 HRES1P13985 223 aa7.79□□□□□ -1.16
CHD1L-208ENST00000488864 SPINK6Q6UWN8 80 aa7.79□□□□□ -1.16
CHD1L-208ENST00000488864 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
CHD1L-208ENST00000488864 A6NN06 94 aa7.78□□□□□ -1.16
CHD1L-208ENST00000488864 Q8N1X5 172 aa7.78□□□□□ -1.16
CHD1L-208ENST00000488864 A0A087X002 238 aa7.78□□□□□ -1.16
CHD1L-208ENST00000488864 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
CHD1L-208ENST00000488864 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
CHD1L-208ENST00000488864 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
CHD1L-208ENST00000488864 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
CHD1L-208ENST00000488864 A0A1B0GVX0 72 aa7.76□□□□□ -1.17
CHD1L-208ENST00000488864 SPINK7P58062 85 aa7.75□□□□□ -1.17
CHD1L-208ENST00000488864 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
CHD1L-208ENST00000488864 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
CHD1L-208ENST00000488864 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
CHD1L-208ENST00000488864 RBM12B-AS1Q9P1G2 102 aa7.73□□□□□ -1.17
CHD1L-208ENST00000488864 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
CHD1L-208ENST00000488864 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
CHD1L-208ENST00000488864 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
CHD1L-208ENST00000488864 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
CHD1L-208ENST00000488864 Q5W150 140 aa7.69□□□□□ -1.18
CHD1L-208ENST00000488864 HERC2O95714 4834 aa7.68□□□□□ -1.18
CHD1L-208ENST00000488864 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
CHD1L-208ENST00000488864 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
CHD1L-208ENST00000488864 KRTAP13-3Q3SY46 172 aa7.63□□□□□ -1.19
CHD1L-208ENST00000488864 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
CHD1L-208ENST00000488864 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
CHD1L-208ENST00000488864 SSBP3-AS1Q7Z2R9 100 aa7.6□□□□□ -1.19
CHD1L-208ENST00000488864 TNXBP22105 4242 aa7.59□□□□□ -1.19
CHD1L-208ENST00000488864 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
CHD1L-208ENST00000488864 ACYP2P14621 99 aa7.56□□□□□ -1.2
CHD1L-208ENST00000488864 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
CHD1L-208ENST00000488864 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
CHD1L-208ENST00000488864 RETNLBQ9BQ08 111 aa7.53□□□□□ -1.2
CHD1L-208ENST00000488864 KRTAP10-8P60410 259 aa7.52□□□□□ -1.2
CHD1L-208ENST00000488864 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
CHD1L-208ENST00000488864 MT1HL1P0DM35 61 aa7.5□□□□□ -1.21
CHD1L-208ENST00000488864 LINC00313P59037 77 aa7.5□□□□□ -1.21
CHD1L-208ENST00000488864 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
CHD1L-208ENST00000488864 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
CHD1L-208ENST00000488864 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
CHD1L-208ENST00000488864 SPINK1P00995 79 aa7.48□□□□□ -1.21
CHD1L-208ENST00000488864 A0A1B0GU69 56 aa7.46□□□□□ -1.22
CHD1L-208ENST00000488864 C8orf87E5RJ46 101 aa7.46□□□□□ -1.22
CHD1L-208ENST00000488864 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
CHD1L-208ENST00000488864 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
CHD1L-208ENST00000488864 J3QL48 77 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms