RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 J3KT08 172 aa11.58□□□□□ -0.56
VAMP2-204ENST00000488857 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
VAMP2-204ENST00000488857 C9orf118A6NHY6 69 aa11.57□□□□□ -0.56
VAMP2-204ENST00000488857 C8orf87E5RJ46 101 aa11.56□□□□□ -0.56
VAMP2-204ENST00000488857 FLGP20930 4061 aaPredicted RBP11.56□□□□□ -0.56
VAMP2-204ENST00000488857 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
VAMP2-204ENST00000488857 C14orf132Q9NPU4 83 aa11.53□□□□□ -0.56
VAMP2-204ENST00000488857 A0A1W2PPM0 123 aa11.52□□□□□ -0.57
VAMP2-204ENST00000488857 H3BT86 120 aa11.48□□□□□ -0.57
VAMP2-204ENST00000488857 LORP23490 312 aaPredicted RBP11.48□□□□□ -0.57
VAMP2-204ENST00000488857 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
VAMP2-204ENST00000488857 KRTAP10-6P60371 365 aaPredicted RBP11.47□□□□□ -0.57
VAMP2-204ENST00000488857 M0R2T5 61 aa11.45□□□□□ -0.58
VAMP2-204ENST00000488857 NDUFB1O75438 58 aa11.45□□□□□ -0.58
VAMP2-204ENST00000488857 A8MWP4 228 aa11.43□□□□□ -0.58
VAMP2-204ENST00000488857 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
VAMP2-204ENST00000488857 NREPQ16612 68 aa11.38□□□□□ -0.59
VAMP2-204ENST00000488857 IGKV3D-7A0A0C4DH55 119 aa11.37□□□□□ -0.59
VAMP2-204ENST00000488857 Q8N9P0 234 aaPredicted RBP11.37□□□□□ -0.59
VAMP2-204ENST00000488857 C8orf17Q9NRJ1 99 aa11.36□□□□□ -0.59
VAMP2-204ENST00000488857 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
VAMP2-204ENST00000488857 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
VAMP2-204ENST00000488857 PRR15Q8IV56 129 aa11.33□□□□□ -0.6
VAMP2-204ENST00000488857 MPLKIPQ8TAP9 179 aa11.33□□□□□ -0.6
VAMP2-204ENST00000488857 HRES1P13985 223 aa11.32□□□□□ -0.6
VAMP2-204ENST00000488857 COL5A1-AS1Q5SY13 56 aa11.32□□□□□ -0.6
VAMP2-204ENST00000488857 KRTAP9-6A0A140TA67 174 aa11.28□□□□□ -0.6
VAMP2-204ENST00000488857 Q6ZVQ6 151 aa11.27□□□□□ -0.61
VAMP2-204ENST00000488857 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
VAMP2-204ENST00000488857 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
VAMP2-204ENST00000488857 MMP24-AS1A0A0U1RRL7 71 aa11.23□□□□□ -0.61
VAMP2-204ENST00000488857 FAM236DA0A1B0GTK5 79 aa11.22□□□□□ -0.61
VAMP2-204ENST00000488857 FAM236CP0DP71 79 aa11.22□□□□□ -0.61
VAMP2-204ENST00000488857 TMEM254Q8TBM7 123 aa11.21□□□□□ -0.61
VAMP2-204ENST00000488857 PRO0461Q9UI25 63 aa11.21□□□□□ -0.61
VAMP2-204ENST00000488857 K7EQZ3 153 aa11.2□□□□□ -0.62
VAMP2-204ENST00000488857 SPINK7P58062 85 aa11.2□□□□□ -0.62
VAMP2-204ENST00000488857 K7EP34 96 aa11.19□□□□□ -0.62
VAMP2-204ENST00000488857 BPY2O14599 106 aa11.18□□□□□ -0.62
VAMP2-204ENST00000488857 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
VAMP2-204ENST00000488857 hDV103S1A0JD37 113 aa11.15□□□□□ -0.62
VAMP2-204ENST00000488857 KRTAP9-8Q9BYQ0 159 aa11.11□□□□□ -0.63
VAMP2-204ENST00000488857 FSIP2Q5CZC0 6907 aa11.1□□□□□ -0.63
VAMP2-204ENST00000488857 CRCT1Q9UGL9 99 aa11.09□□□□□ -0.63
VAMP2-204ENST00000488857 GTF2H5Q6ZYL4 71 aa11.06□□□□□ -0.64
VAMP2-204ENST00000488857 LINC00846Q9NV44 126 aa11.05□□□□□ -0.64
VAMP2-204ENST00000488857 PCP4L1A6NKN8 68 aa11.04□□□□□ -0.64
VAMP2-204ENST00000488857 Q8N9L7 120 aa11.04□□□□□ -0.64
VAMP2-204ENST00000488857 NDUFS5O43920 106 aa11.03□□□□□ -0.64
VAMP2-204ENST00000488857 WFDC13Q8IUB5 93 aa11.03□□□□□ -0.64
VAMP2-204ENST00000488857 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
VAMP2-204ENST00000488857 F8W1H4 67 aa11□□□□□ -0.65
VAMP2-204ENST00000488857 CASC2Q6XLA1 102 aa11□□□□□ -0.65
VAMP2-204ENST00000488857 MT2AP02795 61 aa10.96□□□□□ -0.65
VAMP2-204ENST00000488857 Q5W150 140 aa10.94□□□□□ -0.66
VAMP2-204ENST00000488857 ETDBQ3ZM63 59 aa10.92□□□□□ -0.66
VAMP2-204ENST00000488857 HCG22E2RYF7 251 aa10.91□□□□□ -0.66
VAMP2-204ENST00000488857 CXCL6P80162 114 aa10.89□□□□□ -0.67
VAMP2-204ENST00000488857 C7orf65Q6ZTY9 151 aa10.88□□□□□ -0.67
VAMP2-204ENST00000488857 MT1FP04733 61 aa10.87□□□□□ -0.67
VAMP2-204ENST00000488857 IGKV2D-30A0A075B6S6 120 aa10.86□□□□□ -0.67
VAMP2-204ENST00000488857 IGKV2-30P06310 120 aa10.86□□□□□ -0.67
VAMP2-204ENST00000488857 H1FX-AS1Q4G0G2 97 aa10.81□□□□□ -0.68
VAMP2-204ENST00000488857 KRTAP10-10P60014 251 aa10.79□□□□□ -0.68
VAMP2-204ENST00000488857 KRTAP9-3Q9BYQ3 159 aa10.77□□□□□ -0.69
VAMP2-204ENST00000488857 USH2AO75445 5202 aa10.71□□□□□ -0.69
VAMP2-204ENST00000488857 ACYP1P07311 99 aa10.71□□□□□ -0.69
VAMP2-204ENST00000488857 TP53AIP1Q9HCN2 124 aa10.71□□□□□ -0.69
VAMP2-204ENST00000488857 FAM240AA0A1B0GVK7 77 aa10.68□□□□□ -0.7
VAMP2-204ENST00000488857 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
VAMP2-204ENST00000488857 LCE2BO14633 110 aa10.67□□□□□ -0.7
VAMP2-204ENST00000488857 SSPOA2VEC9 5147 aa10.61□□□□□ -0.71
VAMP2-204ENST00000488857 ATP5EP2Q5VTU8 51 aa10.61□□□□□ -0.71
VAMP2-204ENST00000488857 KRTAP3-1Q9BYR8 98 aa10.56□□□□□ -0.72
VAMP2-204ENST00000488857 C1orf64Q8NEQ6 169 aa10.5□□□□□ -0.73
VAMP2-204ENST00000488857 TRAV22A0A0B4J277 110 aa10.47□□□□□ -0.73
VAMP2-204ENST00000488857 CYP4F30PQ9H0H9 118 aa10.47□□□□□ -0.73
VAMP2-204ENST00000488857 A0A1B0GV90 55 aa10.46□□□□□ -0.73
VAMP2-204ENST00000488857 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.73
VAMP2-204ENST00000488857 LINC00643Q86TS7 51 aa10.44□□□□□ -0.74
VAMP2-204ENST00000488857 S4R3F8 94 aa10.44□□□□□ -0.74
VAMP2-204ENST00000488857 KRTAP19-1Q8IUB9 90 aa10.43□□□□□ -0.74
VAMP2-204ENST00000488857 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
VAMP2-204ENST00000488857 C5orf47Q569G3 176 aa10.4□□□□□ -0.74
VAMP2-204ENST00000488857 UQCRQO14949 82 aa10.39□□□□□ -0.75
VAMP2-204ENST00000488857 LCA10Q71F78 164 aa10.38□□□□□ -0.75
VAMP2-204ENST00000488857 CSAG1Q6PB30 78 aa10.36□□□□□ -0.75
VAMP2-204ENST00000488857 FCGBPQ9Y6R7 5405 aaPredicted RBP10.34□□□□□ -0.75
VAMP2-204ENST00000488857 A0A087WVE0 104 aa10.34□□□□□ -0.75
VAMP2-204ENST00000488857 ATOX1O00244 68 aa10.34□□□□□ -0.75
VAMP2-204ENST00000488857 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.33□□□□□ -0.76
VAMP2-204ENST00000488857 H0Y9P7 68 aa10.31□□□□□ -0.76
VAMP2-204ENST00000488857 KRTAP19-6Q3LI70 58 aa10.31□□□□□ -0.76
VAMP2-204ENST00000488857 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
VAMP2-204ENST00000488857 J3QR89 54 aa10.24□□□□□ -0.77
VAMP2-204ENST00000488857 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
VAMP2-204ENST00000488857 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
VAMP2-204ENST00000488857 OCR1Q9BZK8 76 aa10.21□□□□□ -0.77
VAMP2-204ENST00000488857 KRTAP9-7A8MTY7 169 aa10.15□□□□□ -0.78
VAMP2-204ENST00000488857 LINC00208Q96KT6 92 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms