RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 WDR87Q6ZQQ6 2873 aa-0.13□□□□□ -2.43
CD46-215ENST00000488596 MYO18BQ8IUG5 2567 aa-0.13□□□□□ -2.43
CD46-215ENST00000488596 ITSN2Q9NZM3 1697 aa-0.13□□□□□ -2.43
CD46-215ENST00000488596 H3BVH4 76 aa-0.13□□□□□ -2.43
CD46-215ENST00000488596 MRPL33O75394 65 aaKnown RBP-0.13□□□□□ -2.43
CD46-215ENST00000488596 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
CD46-215ENST00000488596 KCNQ1DNQ9H478 68 aa-0.13□□□□□ -2.43
CD46-215ENST00000488596 NBEAL2Q6ZNJ1 2754 aa-0.14□□□□□ -2.43
CD46-215ENST00000488596 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
CD46-215ENST00000488596 CCDC168Q8NDH2 2452 aa-0.14□□□□□ -2.43
CD46-215ENST00000488596 SPRR2EP22531 72 aa-0.14□□□□□ -2.43
CD46-215ENST00000488596 ENHOQ6UWT2 76 aa-0.14□□□□□ -2.43
CD46-215ENST00000488596 CMYA5Q8N3K9 4069 aa-0.14□□□□□ -2.43
CD46-215ENST00000488596 MROH1Q8NDA8 1641 aa-0.14□□□□□ -2.43
CD46-215ENST00000488596 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.14□□□□□ -2.43
CD46-215ENST00000488596 DIP2AQ14689 1571 aa-0.15□□□□□ -2.43
CD46-215ENST00000488596 RIF1Q5UIP0 2472 aaKnown RBP-0.15□□□□□ -2.43
CD46-215ENST00000488596 H3BNG1 76 aa-0.15□□□□□ -2.43
CD46-215ENST00000488596 DEFB130BP0DP73 79 aa-0.15□□□□□ -2.43
CD46-215ENST00000488596 DEFB130AP0DP74 79 aa-0.15□□□□□ -2.43
CD46-215ENST00000488596 DUOX2Q9NRD8 1548 aa-0.15□□□□□ -2.43
CD46-215ENST00000488596 KIF1AQ12756 1690 aa-0.15□□□□□ -2.43
CD46-215ENST00000488596 MGAM2Q2M2H8 2515 aa-0.16□□□□□ -2.43
CD46-215ENST00000488596 LAMA1P25391 3075 aa-0.16□□□□□ -2.43
CD46-215ENST00000488596 USH2AO75445 5202 aa-0.16□□□□□ -2.43
CD46-215ENST00000488596 ASXL1Q8IXJ9 1541 aa-0.16□□□□□ -2.43
CD46-215ENST00000488596 C9orf92A6NGG3 77 aa-0.16□□□□□ -2.44
CD46-215ENST00000488596 PRLHP81277 87 aa-0.16□□□□□ -2.44
CD46-215ENST00000488596 DEFB106AQ8N104 65 aa-0.16□□□□□ -2.44
CD46-215ENST00000488596 SMCO4Q9NRQ5 59 aa-0.16□□□□□ -2.44
CD46-215ENST00000488596 HILPDAQ9Y5L2 63 aa-0.16□□□□□ -2.44
CD46-215ENST00000488596 RANBP2P49792 3224 aaKnown RBP-0.16□□□□□ -2.44
CD46-215ENST00000488596 HERC2O95714 4834 aa-0.16□□□□□ -2.44
CD46-215ENST00000488596 ETDCA0A1B0GVM5 59 aa-0.17□□□□□ -2.44
CD46-215ENST00000488596 ATXN8Q156A1 80 aa-0.17□□□□□ -2.44
CD46-215ENST00000488596 MADDQ8WXG6 1647 aa-0.17□□□□□ -2.44
CD46-215ENST00000488596 ACACBO00763 2458 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 TOGARAM1Q9Y4F4 1720 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 PDCD5O14737 125 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 CRIP1P50238 77 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 GNG13Q9P2W3 67 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 A0A0C4DFX4 3053 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 RYR1P21817 5038 aa-0.18□□□□□ -2.44
CD46-215ENST00000488596 TLN2Q9Y4G6 2542 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 PLECQ15149 4684 aaKnown RBP-0.19□□□□□ -2.44
CD46-215ENST00000488596 CCDC180Q9P1Z9 1646 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 EPPK1P58107 5090 aaKnown RBP-0.19□□□□□ -2.44
CD46-215ENST00000488596 DEFB114Q30KQ6 69 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 SPRR2FQ96RM1 72 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 S4R3F8 94 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 ABCC6O95255 1503 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 TEX15Q9BXT5 2789 aa-0.19□□□□□ -2.44
CD46-215ENST00000488596 SPENQ96T58 3664 aaKnown RBP-0.19□□□□□ -2.44
CD46-215ENST00000488596 SPTBN5Q9NRC6 3674 aaKnown RBP-0.19□□□□□ -2.44
CD46-215ENST00000488596 USP9XQ93008 2570 aaPredicted RBP-0.2□□□□□ -2.44
CD46-215ENST00000488596 FRYQ5TBA9 3013 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 COL12A1Q99715 3063 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 CDC42BPAQ5VT25 1732 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 KRTAP19-8Q3LI54 63 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 MINOS1Q5TGZ0 78 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 DNHD1Q96M86 4753 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 EFCAB5A4FU69 1503 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 DNMBPQ6XZF7 1577 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 TRIOO75962 3097 aa-0.2□□□□□ -2.44
CD46-215ENST00000488596 RELNP78509 3460 aa-0.21□□□□□ -2.44
CD46-215ENST00000488596 MT1AP04731 61 aa-0.21□□□□□ -2.44
CD46-215ENST00000488596 RPS27P42677 84 aaKnown RBP-0.21□□□□□ -2.44
CD46-215ENST00000488596 RPS27LQ71UM5 84 aaKnown RBP-0.21□□□□□ -2.44
CD46-215ENST00000488596 CROCC2H7BZ55 1655 aa-0.21□□□□□ -2.44
CD46-215ENST00000488596 LY75O60449 1722 aa-0.21□□□□□ -2.44
CD46-215ENST00000488596 ABCA6Q8N139 1617 aa-0.22□□□□□ -2.44
CD46-215ENST00000488596 WT1-ASQ06250 92 aa-0.22□□□□□ -2.44
CD46-215ENST00000488596 C6orf48Q9UBA6 75 aa-0.22□□□□□ -2.44
CD46-215ENST00000488596 A0A1B0GUL6 1792 aa-0.22□□□□□ -2.45
CD46-215ENST00000488596 CLASP1Q7Z460 1538 aa-0.23□□□□□ -2.45
CD46-215ENST00000488596 DYNC1H1Q14204 4646 aaKnown RBP-0.23□□□□□ -2.45
CD46-215ENST00000488596 C5orf42Q9H799 3197 aa-0.23□□□□□ -2.45
CD46-215ENST00000488596 FCER1GP30273 86 aa-0.23□□□□□ -2.45
CD46-215ENST00000488596 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.23□□□□□ -2.45
CD46-215ENST00000488596 TIAM1Q13009 1591 aa-0.23□□□□□ -2.45
CD46-215ENST00000488596 RYR2Q92736 4967 aa-0.24□□□□□ -2.45
CD46-215ENST00000488596 DEFB110Q30KQ9 67 aa-0.24□□□□□ -2.45
CD46-215ENST00000488596 NCBP2-AS2Q69YL0 99 aa-0.24□□□□□ -2.45
CD46-215ENST00000488596 BIRC6Q9NR09 4857 aa-0.24□□□□□ -2.45
CD46-215ENST00000488596 RYR3Q15413 4870 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 DNAH17Q9UFH2 4485 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 ITPR1Q14643 2758 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 RNF213Q63HN8 5207 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 LINC01549A6NIU2 74 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 SFTA3P0C7M3 94 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 ALS2Q96Q42 1657 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 HYDINQ4G0P3 5121 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 SPTAN1Q13813 2472 aaKnown RBP-0.25□□□□□ -2.45
CD46-215ENST00000488596 DNAH10Q8IVF4 4471 aa-0.25□□□□□ -2.45
CD46-215ENST00000488596 DOPEY1Q5JWR5 2465 aa-0.26□□□□□ -2.45
CD46-215ENST00000488596 GLI2P10070 1586 aa-0.26□□□□□ -2.45
CD46-215ENST00000488596 H3BUA1 57 aa-0.26□□□□□ -2.45
CD46-215ENST00000488596 TRRAPQ9Y4A5 3859 aa-0.27□□□□□ -2.45
CD46-215ENST00000488596 IGLV5-48A0A075B6I7 105 aa-0.27□□□□□ -2.45
CD46-215ENST00000488596 K7EMI3 77 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms