RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
TRIM56-204ENST00000487252 DSCR8Q96T75 97 aa6.48□□□□□ -1.37
TRIM56-204ENST00000487252 FAM236AA0A1B0GUQ0 79 aa6.46□□□□□ -1.38
TRIM56-204ENST00000487252 FAM236BA0A1B0GV22 79 aa6.46□□□□□ -1.38
TRIM56-204ENST00000487252 RPL37AP8A6NKH3 93 aa6.46□□□□□ -1.38
TRIM56-204ENST00000487252 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.38
TRIM56-204ENST00000487252 Q9BRP9 147 aa6.46□□□□□ -1.38
TRIM56-204ENST00000487252 UBL5Q9BZL1 73 aa6.46□□□□□ -1.38
TRIM56-204ENST00000487252 IGLV5-48A0A075B6I7 105 aa6.45□□□□□ -1.38
TRIM56-204ENST00000487252 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
TRIM56-204ENST00000487252 ETDCA0A1B0GVM5 59 aa6.45□□□□□ -1.38
TRIM56-204ENST00000487252 Q8N377 158 aa6.45□□□□□ -1.38
TRIM56-204ENST00000487252 KRTAP4-2Q9BYR5 136 aa6.44□□□□□ -1.38
TRIM56-204ENST00000487252 BCE1O60756 84 aa6.42□□□□□ -1.38
TRIM56-204ENST00000487252 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
TRIM56-204ENST00000487252 Q6ZVQ6 151 aa6.42□□□□□ -1.38
TRIM56-204ENST00000487252 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
TRIM56-204ENST00000487252 ATOX1O00244 68 aa6.41□□□□□ -1.38
TRIM56-204ENST00000487252 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
TRIM56-204ENST00000487252 A0A1B0GW54 56 aa6.4□□□□□ -1.38
TRIM56-204ENST00000487252 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
TRIM56-204ENST00000487252 CXCL6P80162 114 aa6.4□□□□□ -1.38
TRIM56-204ENST00000487252 ST20-AS1Q8NBB2 130 aa6.39□□□□□ -1.39
TRIM56-204ENST00000487252 A0A087WVE0 104 aa6.38□□□□□ -1.39
TRIM56-204ENST00000487252 DEFB105AQ8NG35 78 aa6.38□□□□□ -1.39
TRIM56-204ENST00000487252 IGLV8-61A0A075B6I0 122 aa6.37□□□□□ -1.39
TRIM56-204ENST00000487252 FAM19A1Q7Z5A9 133 aa6.37□□□□□ -1.39
TRIM56-204ENST00000487252 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
TRIM56-204ENST00000487252 C3orf22Q8N5N4 141 aa6.37□□□□□ -1.39
TRIM56-204ENST00000487252 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
TRIM56-204ENST00000487252 NEBP20929 6669 aa6.37□□□□□ -1.39
TRIM56-204ENST00000487252 UQCRQO14949 82 aa6.36□□□□□ -1.39
TRIM56-204ENST00000487252 COX7CP15954 63 aa6.36□□□□□ -1.39
TRIM56-204ENST00000487252 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
TRIM56-204ENST00000487252 SPRR1BP22528 89 aa6.35□□□□□ -1.39
TRIM56-204ENST00000487252 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
TRIM56-204ENST00000487252 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
TRIM56-204ENST00000487252 SPRR4Q96PI1 79 aa6.34□□□□□ -1.39
TRIM56-204ENST00000487252 Q8NBF4 154 aa6.33□□□□□ -1.4
TRIM56-204ENST00000487252 PRLHP81277 87 aa6.32□□□□□ -1.4
TRIM56-204ENST00000487252 NREPQ16612 68 aa6.31□□□□□ -1.4
TRIM56-204ENST00000487252 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
TRIM56-204ENST00000487252 C9orf153Q5TBE3 101 aa6.29□□□□□ -1.4
TRIM56-204ENST00000487252 COX6B2Q6YFQ2 88 aa6.29□□□□□ -1.4
TRIM56-204ENST00000487252 F8WEM9 126 aa6.28□□□□□ -1.4
TRIM56-204ENST00000487252 SPINK1P00995 79 aa6.28□□□□□ -1.4
TRIM56-204ENST00000487252 IGKV4-1P06312 121 aa6.28□□□□□ -1.4
TRIM56-204ENST00000487252 SMIM20Q8N5G0 67 aa6.28□□□□□ -1.4
TRIM56-204ENST00000487252 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
TRIM56-204ENST00000487252 BPY2O14599 106 aa6.27□□□□□ -1.41
TRIM56-204ENST00000487252 IGFL1Q6UW32 110 aa6.27□□□□□ -1.41
TRIM56-204ENST00000487252 UBE2AP49459 152 aa6.26□□□□□ -1.41
TRIM56-204ENST00000487252 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
TRIM56-204ENST00000487252 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
TRIM56-204ENST00000487252 SS18L2Q9UHA2 77 aa6.25□□□□□ -1.41
TRIM56-204ENST00000487252 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
TRIM56-204ENST00000487252 DSCR10P59022 87 aa6.21□□□□□ -1.42
TRIM56-204ENST00000487252 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
TRIM56-204ENST00000487252 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
TRIM56-204ENST00000487252 Q8N9L7 120 aa6.2□□□□□ -1.42
TRIM56-204ENST00000487252 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
TRIM56-204ENST00000487252 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
TRIM56-204ENST00000487252 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
TRIM56-204ENST00000487252 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
TRIM56-204ENST00000487252 TMEM258P61165 79 aa6.17□□□□□ -1.42
TRIM56-204ENST00000487252 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
TRIM56-204ENST00000487252 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
TRIM56-204ENST00000487252 A0A087WSZ3 146 aa6.16□□□□□ -1.42
TRIM56-204ENST00000487252 MT2AP02795 61 aa6.16□□□□□ -1.42
TRIM56-204ENST00000487252 KLKP1Q107X0 134 aa6.16□□□□□ -1.42
TRIM56-204ENST00000487252 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
TRIM56-204ENST00000487252 C20orf197Q8N268 126 aa6.15□□□□□ -1.42
TRIM56-204ENST00000487252 K7EQZ3 153 aa6.14□□□□□ -1.43
TRIM56-204ENST00000487252 LINC00472Q9H8W2 130 aa6.14□□□□□ -1.43
TRIM56-204ENST00000487252 MT1FP04733 61 aa6.12□□□□□ -1.43
TRIM56-204ENST00000487252 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
TRIM56-204ENST00000487252 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
TRIM56-204ENST00000487252 H7BZZ5 65 aa6.1□□□□□ -1.43
TRIM56-204ENST00000487252 J3KT08 172 aa6.09□□□□□ -1.43
TRIM56-204ENST00000487252 NDUFC1O43677 76 aa6.09□□□□□ -1.43
TRIM56-204ENST00000487252 TMEM254Q8TBM7 123 aa6.09□□□□□ -1.43
TRIM56-204ENST00000487252 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
TRIM56-204ENST00000487252 A8MWP4 228 aa6.08□□□□□ -1.44
TRIM56-204ENST00000487252 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
TRIM56-204ENST00000487252 C9orf92A6NGG3 77 aa6.07□□□□□ -1.44
TRIM56-204ENST00000487252 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
TRIM56-204ENST00000487252 Q96NJ1 140 aa6.07□□□□□ -1.44
TRIM56-204ENST00000487252 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
TRIM56-204ENST00000487252 MOBPQ13875 183 aa6.05□□□□□ -1.44
TRIM56-204ENST00000487252 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
TRIM56-204ENST00000487252 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
TRIM56-204ENST00000487252 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
TRIM56-204ENST00000487252 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
TRIM56-204ENST00000487252 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
TRIM56-204ENST00000487252 CD164Q04900 197 aa6.03□□□□□ -1.44
TRIM56-204ENST00000487252 C5orf47Q569G3 176 aa6.03□□□□□ -1.44
TRIM56-204ENST00000487252 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
TRIM56-204ENST00000487252 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
TRIM56-204ENST00000487252 CASC2Q6XLA1 102 aa6.01□□□□□ -1.45
TRIM56-204ENST00000487252 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms