RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
EPHB4-206ENST00000487222 ASH1LQ9NR48 2969 aaKnown RBP8.4□□□□□ -1.07
EPHB4-206ENST00000487222 LRBAP50851 2863 aa8.39□□□□□ -1.07
EPHB4-206ENST00000487222 ZZEF1O43149 2961 aa8.38□□□□□ -1.07
EPHB4-206ENST00000487222 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
EPHB4-206ENST00000487222 TENM4Q6N022 2769 aa8.37□□□□□ -1.07
EPHB4-206ENST00000487222 APCP25054 2843 aa8.36□□□□□ -1.07
EPHB4-206ENST00000487222 CELSR2Q9HCU4 2923 aa8.33□□□□□ -1.08
EPHB4-206ENST00000487222 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
EPHB4-206ENST00000487222 ZANQ9Y493 2812 aa8.28□□□□□ -1.08
EPHB4-206ENST00000487222 DNAH14Q0VDD8 3507 aa8.27□□□□□ -1.09
EPHB4-206ENST00000487222 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
EPHB4-206ENST00000487222 A8MU10 97 aa8.26□□□□□ -1.09
EPHB4-206ENST00000487222 COL6A3P12111 3177 aa8.25□□□□□ -1.09
EPHB4-206ENST00000487222 EYSQ5T1H1 3165 aa8.24□□□□□ -1.09
EPHB4-206ENST00000487222 DCHS2Q6V1P9 2916 aa8.22□□□□□ -1.09
EPHB4-206ENST00000487222 PLAC4Q8WY50 150 aa8.21□□□□□ -1.1
EPHB4-206ENST00000487222 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
EPHB4-206ENST00000487222 CFAP47Q6ZTR5 3102 aa8.16□□□□□ -1.1
EPHB4-206ENST00000487222 A8MUU9 505 aa8.16□□□□□ -1.1
EPHB4-206ENST00000487222 KRTAP21-3Q3LHN1 58 aa8.15□□□□□ -1.1
EPHB4-206ENST00000487222 TNRC18O15417 2968 aaPredicted RBP8.1□□□□□ -1.11
EPHB4-206ENST00000487222 DMXL1Q9Y485 3027 aa8.08□□□□□ -1.12
EPHB4-206ENST00000487222 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
EPHB4-206ENST00000487222 HRNRQ86YZ3 2850 aaPredicted RBP8.06□□□□□ -1.12
EPHB4-206ENST00000487222 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
EPHB4-206ENST00000487222 NF1P21359 2839 aa8.05□□□□□ -1.12
EPHB4-206ENST00000487222 FBN2P35556 2912 aa8.02□□□□□ -1.13
EPHB4-206ENST00000487222 TENM3Q9P273 2699 aa7.99□□□□□ -1.13
EPHB4-206ENST00000487222 USP34Q70CQ2 3546 aa7.97□□□□□ -1.13
EPHB4-206ENST00000487222 NDUFAF8A1L188 74 aa7.96□□□□□ -1.13
EPHB4-206ENST00000487222 SPEGQ15772 3267 aa7.96□□□□□ -1.14
EPHB4-206ENST00000487222 LOC400499M0QZD8 3231 aa7.92□□□□□ -1.14
EPHB4-206ENST00000487222 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
EPHB4-206ENST00000487222 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.14
EPHB4-206ENST00000487222 TENM1Q9UKZ4 2725 aa7.9□□□□□ -1.14
EPHB4-206ENST00000487222 TNP1P09430 55 aa7.89□□□□□ -1.15
EPHB4-206ENST00000487222 MXRA5Q9NR99 2828 aa7.8□□□□□ -1.16
EPHB4-206ENST00000487222 XP32Q5T750 250 aa7.79□□□□□ -1.16
EPHB4-206ENST00000487222 H0YAA0 97 aa7.78□□□□□ -1.16
EPHB4-206ENST00000487222 CELSR1Q9NYQ6 3014 aa7.76□□□□□ -1.17
EPHB4-206ENST00000487222 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
EPHB4-206ENST00000487222 TENM2Q9NT68 2774 aa7.74□□□□□ -1.17
EPHB4-206ENST00000487222 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
EPHB4-206ENST00000487222 MYO15AQ9UKN7 3530 aa7.72□□□□□ -1.17
EPHB4-206ENST00000487222 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
EPHB4-206ENST00000487222 P0C880 135 aa7.62□□□□□ -1.19
EPHB4-206ENST00000487222 DCHS1Q96JQ0 3298 aa7.62□□□□□ -1.19
EPHB4-206ENST00000487222 TPRXLQ17RH7 258 aa7.62□□□□□ -1.19
EPHB4-206ENST00000487222 TGP01266 2768 aa7.59□□□□□ -1.19
EPHB4-206ENST00000487222 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
EPHB4-206ENST00000487222 KRTAP10-8P60410 259 aa7.57□□□□□ -1.2
EPHB4-206ENST00000487222 RELNP78509 3460 aa7.54□□□□□ -1.2
EPHB4-206ENST00000487222 PDZD2O15018 2839 aa7.53□□□□□ -1.2
EPHB4-206ENST00000487222 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
EPHB4-206ENST00000487222 VWFP04275 2813 aa7.5□□□□□ -1.21
EPHB4-206ENST00000487222 WDFY3Q8IZQ1 3526 aa7.45□□□□□ -1.22
EPHB4-206ENST00000487222 FBN1P35555 2871 aaKnown RBP7.4□□□□□ -1.22
EPHB4-206ENST00000487222 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
EPHB4-206ENST00000487222 OTOGQ6ZRI0 2925 aa7.33□□□□□ -1.24
EPHB4-206ENST00000487222 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
EPHB4-206ENST00000487222 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
EPHB4-206ENST00000487222 LAMA5O15230 3695 aa7.26□□□□□ -1.25
EPHB4-206ENST00000487222 SRRM2Q9UQ35 2752 aaKnown RBP7.25□□□□□ -1.25
EPHB4-206ENST00000487222 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
EPHB4-206ENST00000487222 ZFHX4Q86UP3 3567 aa7.18□□□□□ -1.26
EPHB4-206ENST00000487222 ASPMQ8IZT6 3477 aa7.18□□□□□ -1.26
EPHB4-206ENST00000487222 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
EPHB4-206ENST00000487222 MUC3AQ02505 3323 aa7.17□□□□□ -1.26
EPHB4-206ENST00000487222 NBPF19A0A087WUL8 3843 aa7.16□□□□□ -1.26
EPHB4-206ENST00000487222 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
EPHB4-206ENST00000487222 DMDP11532 3685 aa7.14□□□□□ -1.27
EPHB4-206ENST00000487222 FBN3Q75N90 2809 aa7.14□□□□□ -1.27
EPHB4-206ENST00000487222 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
EPHB4-206ENST00000487222 CSMD1Q96PZ7 3565 aa7.03□□□□□ -1.28
EPHB4-206ENST00000487222 KRTAP10-6P60371 365 aaPredicted RBP7□□□□□ -1.29
EPHB4-206ENST00000487222 MEGF8Q7Z7M0 2845 aa7□□□□□ -1.29
EPHB4-206ENST00000487222 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
EPHB4-206ENST00000487222 SMG1Q96Q15 3661 aaKnown RBP6.94□□□□□ -1.3
EPHB4-206ENST00000487222 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
EPHB4-206ENST00000487222 CSMD2Q7Z408 3487 aa6.87□□□□□ -1.31
EPHB4-206ENST00000487222 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
EPHB4-206ENST00000487222 TRRAPQ9Y4A5 3859 aa6.82□□□□□ -1.32
EPHB4-206ENST00000487222 SVEP1Q4LDE5 3571 aa6.82□□□□□ -1.32
EPHB4-206ENST00000487222 CUBNO60494 3623 aa6.78□□□□□ -1.32
EPHB4-206ENST00000487222 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
EPHB4-206ENST00000487222 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
EPHB4-206ENST00000487222 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
EPHB4-206ENST00000487222 SPENQ96T58 3664 aaKnown RBP6.69□□□□□ -1.34
EPHB4-206ENST00000487222 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
EPHB4-206ENST00000487222 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
EPHB4-206ENST00000487222 INE1O15225 51 aa6.52□□□□□ -1.37
EPHB4-206ENST00000487222 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
EPHB4-206ENST00000487222 BSNQ9UPA5 3926 aa6.51□□□□□ -1.37
EPHB4-206ENST00000487222 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
EPHB4-206ENST00000487222 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
EPHB4-206ENST00000487222 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
EPHB4-206ENST00000487222 VPS13CQ709C8 3753 aa6.31□□□□□ -1.4
EPHB4-206ENST00000487222 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
EPHB4-206ENST00000487222 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms