RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CNFNQ9BYD5 112 aa1.55□□□□□ -2.16
PRPF38A-203ENST00000487160 ERC2-IT1O76042 136 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 DPM2O94777 84 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 MT2AP02795 61 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 RPS29P62273 56 aaKnown RBP1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 LINC00846Q9NV44 126 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 SPANXCQ9NY87 97 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 TOMM7Q9P0U1 55 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 HSPB8Q9UJY1 196 aa1.54□□□□□ -2.16
PRPF38A-203ENST00000487160 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
PRPF38A-203ENST00000487160 MT1FP04733 61 aa1.53□□□□□ -2.16
PRPF38A-203ENST00000487160 GNG4P50150 75 aa1.53□□□□□ -2.16
PRPF38A-203ENST00000487160 Q8IZM0 81 aa1.53□□□□□ -2.16
PRPF38A-203ENST00000487160 F8VRH5 84 aa1.52□□□□□ -2.17
PRPF38A-203ENST00000487160 TCTE3Q8IZS6 198 aa1.52□□□□□ -2.17
PRPF38A-203ENST00000487160 KCNRGQ8N5I3 272 aa1.52□□□□□ -2.17
PRPF38A-203ENST00000487160 CLEC2BQ92478 149 aa1.52□□□□□ -2.17
PRPF38A-203ENST00000487160 MUC12Q9UKN1 5478 aa1.52□□□□□ -2.17
PRPF38A-203ENST00000487160 FXYD6-FXYD2A0A087WZ82 144 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 HBDP02042 147 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 IFI27P40305 119 aaPredicted RBP1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 RPL37P61927 97 aaKnown RBP1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 MIR22HGQ0VDD5 57 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 Q5BKY6 102 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 FAM213BQ8TBF2 198 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 TMEM191AQ9H0A3 160 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 GNG13Q9P2W3 67 aa1.51□□□□□ -2.17
PRPF38A-203ENST00000487160 UQCRQO14949 82 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 INE1O15225 51 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 PPP1R17O96001 155 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 TMEM141Q96I45 108 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 C2orf88Q9BSF0 95 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 SMIM2Q9BVW6 85 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 MANBALQ9NQG1 85 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 CDC42SE1Q9NRR8 79 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 CDKN2A-AS1Q9UH64 79 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 SNURFQ9Y675 71 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 NEBP20929 6669 aa1.5□□□□□ -2.17
PRPF38A-203ENST00000487160 A0A1B0GUT8 65 aa1.49□□□□□ -2.17
PRPF38A-203ENST00000487160 HIGD1CA8MV81 97 aa1.49□□□□□ -2.17
PRPF38A-203ENST00000487160 TRACP01848 142 aa1.49□□□□□ -2.17
PRPF38A-203ENST00000487160 C9orf153Q5TBE3 101 aa1.49□□□□□ -2.17
PRPF38A-203ENST00000487160 SSBP3-AS1Q7Z2R9 100 aa1.49□□□□□ -2.17
PRPF38A-203ENST00000487160 LIMD2Q9BT23 127 aa1.49□□□□□ -2.17
PRPF38A-203ENST00000487160 A6NN06 94 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 UMAD1C9J7I0 102 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 CKS2P33552 79 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 COX7B2Q8TF08 81 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 AMELXQ99217 191 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 C20orf78Q9BR46 151 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 ORMDL1Q9P0S3 153 aa1.48□□□□□ -2.17
PRPF38A-203ENST00000487160 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 C20orf202A1L168 122 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 D6R8Y8 96 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 SPRR1AP35321 89 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 AKR1D1P51857 326 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
PRPF38A-203ENST00000487160 SPINK8P0C7L1 97 aa1.46□□□□□ -2.18
PRPF38A-203ENST00000487160 SEC11AP67812 179 aa1.46□□□□□ -2.18
PRPF38A-203ENST00000487160 ERG28Q9UKR5 140 aa1.46□□□□□ -2.18
PRPF38A-203ENST00000487160 IGIPA6NJ69 53 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 F8W1H4 67 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 NCR3O14931 201 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 COX7CP15954 63 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 ATP11AUNQ6ZP68 121 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 TEN1Q86WV5 123 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 S100ZQ8WXG8 99 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 OBSCN-AS1Q96MR7 158 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 KCNQ1DNQ9H478 68 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
PRPF38A-203ENST00000487160 TRBV20-1A0A075B6N2 111 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 TRBV10-3A0A0K0K1G6 114 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 KANTRA0A1W2PQU2 76 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 COX17Q14061 63 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 MRPL54Q6P161 138 aaKnown RBP1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 Q6ZRX8 168 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 LINC00299Q6ZSB3 139 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 V9GYV3 84 aa1.44□□□□□ -2.18
PRPF38A-203ENST00000487160 KMT2DO14686 5537 aa1.43□□□□□ -2.18
PRPF38A-203ENST00000487160 SMIM7Q9BQ49 75 aa1.43□□□□□ -2.18
PRPF38A-203ENST00000487160 LOC107984156A0A0G2JMH3 177 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 FAM236AA0A1B0GUQ0 79 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 FAM236BA0A1B0GV22 79 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 SMIM27A0A1W2PRY6 76 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 H3BRM9 83 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 ADCYAP1P18509 176 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 LINC00158P58513 81 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 ARL17AQ8IVW1 177 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 Q8N8P6 123 aa1.42□□□□□ -2.18
PRPF38A-203ENST00000487160 K7EMI3 77 aa1.41□□□□□ -2.18
PRPF38A-203ENST00000487160 S100A8P05109 93 aa1.41□□□□□ -2.18
PRPF38A-203ENST00000487160 ALKAL2Q6UX46 152 aa1.41□□□□□ -2.18
PRPF38A-203ENST00000487160 CASC2Q6XLA1 102 aa1.41□□□□□ -2.18
PRPF38A-203ENST00000487160 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
PRPF38A-203ENST00000487160 SMIM13P0DJ93 91 aa1.4□□□□□ -2.19
PRPF38A-203ENST00000487160 IGLC3P0DOY3 106 aa1.4□□□□□ -2.19
PRPF38A-203ENST00000487160 SPRR1BP22528 89 aa1.4□□□□□ -2.19
PRPF38A-203ENST00000487160 ADIRFQ15847 76 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms