RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 CASC2Q6XLA1 102 aa12.4□□□□□ -0.42
CDK5-204ENST00000485972 MMP24-AS1A0A0U1RRL7 71 aa12.39□□□□□ -0.43
CDK5-204ENST00000485972 KRTAP29-1A8MX34 341 aaPredicted RBP12.38□□□□□ -0.43
CDK5-204ENST00000485972 COX7CP15954 63 aa12.38□□□□□ -0.43
CDK5-204ENST00000485972 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
CDK5-204ENST00000485972 C8orf17Q9NRJ1 99 aa12.38□□□□□ -0.43
CDK5-204ENST00000485972 CCDC179H3BU77 68 aa12.35□□□□□ -0.43
CDK5-204ENST00000485972 KRTAP10-8P60410 259 aa12.35□□□□□ -0.43
CDK5-204ENST00000485972 hDV103S1A0JD37 113 aa12.34□□□□□ -0.43
CDK5-204ENST00000485972 UQCRQO14949 82 aa12.34□□□□□ -0.43
CDK5-204ENST00000485972 OCR1Q9BZK8 76 aa12.34□□□□□ -0.43
CDK5-204ENST00000485972 NOTCH2NLQ7Z3S9 236 aa12.32□□□□□ -0.44
CDK5-204ENST00000485972 LRP1Q07954 4544 aaKnown RBP12.31□□□□□ -0.44
CDK5-204ENST00000485972 C8orf87E5RJ46 101 aa12.27□□□□□ -0.45
CDK5-204ENST00000485972 LINC00313P59037 77 aa12.24□□□□□ -0.45
CDK5-204ENST00000485972 TNXBP22105 4242 aa12.24□□□□□ -0.45
CDK5-204ENST00000485972 FAT3Q8TDW7 4589 aa12.24□□□□□ -0.45
CDK5-204ENST00000485972 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
CDK5-204ENST00000485972 MRPL34Q9BQ48 92 aaKnown RBP12.23□□□□□ -0.45
CDK5-204ENST00000485972 FLG2Q5D862 2391 aaPredicted RBP12.22□□□□□ -0.45
CDK5-204ENST00000485972 KRTAP4-5Q9BYR2 181 aa12.2□□□□□ -0.46
CDK5-204ENST00000485972 C20orf197Q8N268 126 aa12.19□□□□□ -0.46
CDK5-204ENST00000485972 MT1HL1P0DM35 61 aa12.17□□□□□ -0.46
CDK5-204ENST00000485972 NDUFS5O43920 106 aa12.16□□□□□ -0.46
CDK5-204ENST00000485972 RETNLBQ9BQ08 111 aa12.16□□□□□ -0.46
CDK5-204ENST00000485972 MYCBP2O75592 4640 aa12.15□□□□□ -0.46
CDK5-204ENST00000485972 BIRC6Q9NR09 4857 aa12.15□□□□□ -0.47
CDK5-204ENST00000485972 OXTP01178 125 aa12.13□□□□□ -0.47
CDK5-204ENST00000485972 C5orf47Q569G3 176 aa12.13□□□□□ -0.47
CDK5-204ENST00000485972 TP53AIP1Q9HCN2 124 aa12.13□□□□□ -0.47
CDK5-204ENST00000485972 SNURFQ9Y675 71 aa12.1□□□□□ -0.47
CDK5-204ENST00000485972 KRTAP16-1A8MUX0 517 aa12.09□□□□□ -0.47
CDK5-204ENST00000485972 CYSTM1Q9H1C7 97 aa12.09□□□□□ -0.47
CDK5-204ENST00000485972 KLKP1Q107X0 134 aa12.08□□□□□ -0.48
CDK5-204ENST00000485972 A0A0U1RQV1 116 aa12.07□□□□□ -0.48
CDK5-204ENST00000485972 MP68P56378 58 aa12.06□□□□□ -0.48
CDK5-204ENST00000485972 Q8N9P0 234 aaPredicted RBP12.05□□□□□ -0.48
CDK5-204ENST00000485972 H0Y9P7 68 aa12.05□□□□□ -0.48
CDK5-204ENST00000485972 TRAV22A0A0B4J277 110 aa12.03□□□□□ -0.48
CDK5-204ENST00000485972 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
CDK5-204ENST00000485972 HERC2O95714 4834 aa12.02□□□□□ -0.49
CDK5-204ENST00000485972 C9orf92A6NGG3 77 aa12□□□□□ -0.49
CDK5-204ENST00000485972 FP248Q71RG6 208 aaPredicted RBP11.98□□□□□ -0.49
CDK5-204ENST00000485972 LINC00208Q96KT6 92 aa11.98□□□□□ -0.49
CDK5-204ENST00000485972 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
CDK5-204ENST00000485972 H3BPC8 53 aa11.97□□□□□ -0.49
CDK5-204ENST00000485972 ZCCHC13Q8WW36 166 aaKnown RBP11.97□□□□□ -0.49
CDK5-204ENST00000485972 NDUFC1O43677 76 aa11.95□□□□□ -0.5
CDK5-204ENST00000485972 Q5W150 140 aa11.95□□□□□ -0.5
CDK5-204ENST00000485972 H7BZZ5 65 aa11.94□□□□□ -0.5
CDK5-204ENST00000485972 C1orf64Q8NEQ6 169 aa11.94□□□□□ -0.5
CDK5-204ENST00000485972 IGLV7-46A0A075B6I9 117 aa11.9□□□□□ -0.5
CDK5-204ENST00000485972 KRTAP13-3Q3SY46 172 aa11.9□□□□□ -0.51
CDK5-204ENST00000485972 TMEM258P61165 79 aa11.87□□□□□ -0.51
CDK5-204ENST00000485972 C20orf166-AS1Q96NR2 134 aa11.85□□□□□ -0.51
CDK5-204ENST00000485972 A8MUU9 505 aa11.84□□□□□ -0.51
CDK5-204ENST00000485972 J3QL48 77 aa11.84□□□□□ -0.51
CDK5-204ENST00000485972 PRR4Q16378 134 aa11.83□□□□□ -0.52
CDK5-204ENST00000485972 LOC101927531A0A1B0GV80 90 aa11.8□□□□□ -0.52
CDK5-204ENST00000485972 FAM236DA0A1B0GTK5 79 aa11.75□□□□□ -0.53
CDK5-204ENST00000485972 FAM236CP0DP71 79 aa11.75□□□□□ -0.53
CDK5-204ENST00000485972 Q75L30 129 aa11.75□□□□□ -0.53
CDK5-204ENST00000485972 PCOTHQ58A44 107 aa11.73□□□□□ -0.53
CDK5-204ENST00000485972 CYP4F30PQ9H0H9 118 aa11.73□□□□□ -0.53
CDK5-204ENST00000485972 IGKV2-30P06310 120 aa11.71□□□□□ -0.54
CDK5-204ENST00000485972 XP32Q5T750 250 aa11.69□□□□□ -0.54
CDK5-204ENST00000485972 ATP5EP56381 51 aaPredicted RBP11.67□□□□□ -0.54
CDK5-204ENST00000485972 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
CDK5-204ENST00000485972 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
CDK5-204ENST00000485972 SPANXA2-OT1Q8N9U9 137 aa11.64□□□□□ -0.55
CDK5-204ENST00000485972 RPL37P61927 97 aaKnown RBP11.63□□□□□ -0.55
CDK5-204ENST00000485972 ATP11AUNQ6ZP68 121 aa11.61□□□□□ -0.55
CDK5-204ENST00000485972 C7orf65Q6ZTY9 151 aa11.59□□□□□ -0.55
CDK5-204ENST00000485972 PCLOQ9Y6V0 5065 aa11.56□□□□□ -0.56
CDK5-204ENST00000485972 HRES1P13985 223 aa11.54□□□□□ -0.56
CDK5-204ENST00000485972 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
CDK5-204ENST00000485972 RPS28P62857 69 aaKnown RBP11.5□□□□□ -0.57
CDK5-204ENST00000485972 SPINK7P58062 85 aa11.49□□□□□ -0.57
CDK5-204ENST00000485972 LPAP08519 4548 aa11.44□□□□□ -0.58
CDK5-204ENST00000485972 LRP2P98164 4655 aa11.37□□□□□ -0.59
CDK5-204ENST00000485972 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
CDK5-204ENST00000485972 DMAC1Q96GE9 116 aa11.36□□□□□ -0.59
CDK5-204ENST00000485972 ACYP2P14621 99 aa11.31□□□□□ -0.6
CDK5-204ENST00000485972 COA5Q86WW8 74 aa11.31□□□□□ -0.6
CDK5-204ENST00000485972 HERC1Q15751 4861 aa11.29□□□□□ -0.6
CDK5-204ENST00000485972 SEC61BP60468 96 aaKnown RBP11.27□□□□□ -0.61
CDK5-204ENST00000485972 A8MUN3 132 aa11.23□□□□□ -0.61
CDK5-204ENST00000485972 SMIM26A0A096LP01 95 aa11.21□□□□□ -0.61
CDK5-204ENST00000485972 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
CDK5-204ENST00000485972 KRTAP3-1Q9BYR8 98 aa11.19□□□□□ -0.62
CDK5-204ENST00000485972 HMCN2Q8NDA2 5059 aa11.17□□□□□ -0.62
CDK5-204ENST00000485972 CHKB-CPT1BH3BT56 60 aa11.16□□□□□ -0.62
CDK5-204ENST00000485972 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
CDK5-204ENST00000485972 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
CDK5-204ENST00000485972 KRTAP4-1Q9BYQ7 146 aa11.02□□□□□ -0.65
CDK5-204ENST00000485972 RBM12B-AS1Q9P1G2 102 aa11.02□□□□□ -0.65
CDK5-204ENST00000485972 Q1T7F1 81 aa10.98□□□□□ -0.65
CDK5-204ENST00000485972 V9GYY9 64 aa10.94□□□□□ -0.66
CDK5-204ENST00000485972 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
CDK5-204ENST00000485972 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms