RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 C8orf87E5RJ46 101 aa8.27□□□□□ -1.09
HDHD3-203ENST00000485934 IGHV6-1A0A0B4J1U7 121 aa8.26□□□□□ -1.09
HDHD3-203ENST00000485934 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
HDHD3-203ENST00000485934 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
HDHD3-203ENST00000485934 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
HDHD3-203ENST00000485934 DSCR10P59022 87 aa8.25□□□□□ -1.09
HDHD3-203ENST00000485934 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
HDHD3-203ENST00000485934 MUC2Q02817 5179 aa8.23□□□□□ -1.09
HDHD3-203ENST00000485934 A8MWP4 228 aa8.22□□□□□ -1.09
HDHD3-203ENST00000485934 A8MUU9 505 aa8.21□□□□□ -1.1
HDHD3-203ENST00000485934 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
HDHD3-203ENST00000485934 BPY2O14599 106 aa8.17□□□□□ -1.1
HDHD3-203ENST00000485934 UBL5Q9BZL1 73 aa8.17□□□□□ -1.1
HDHD3-203ENST00000485934 ETDBQ3ZM63 59 aa8.15□□□□□ -1.1
HDHD3-203ENST00000485934 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
HDHD3-203ENST00000485934 PRR15Q8IV56 129 aa8.15□□□□□ -1.1
HDHD3-203ENST00000485934 KRTAP4-1Q9BYQ7 146 aa8.15□□□□□ -1.1
HDHD3-203ENST00000485934 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
HDHD3-203ENST00000485934 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
HDHD3-203ENST00000485934 Q6ZVQ6 151 aa8.13□□□□□ -1.11
HDHD3-203ENST00000485934 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
HDHD3-203ENST00000485934 LINC00846Q9NV44 126 aa8.09□□□□□ -1.11
HDHD3-203ENST00000485934 ACYP1P07311 99 aa8.07□□□□□ -1.12
HDHD3-203ENST00000485934 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
HDHD3-203ENST00000485934 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
HDHD3-203ENST00000485934 K7EQZ3 153 aa8.05□□□□□ -1.12
HDHD3-203ENST00000485934 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
HDHD3-203ENST00000485934 hDV103S1A0JD37 113 aa8.04□□□□□ -1.12
HDHD3-203ENST00000485934 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
HDHD3-203ENST00000485934 MMP24-AS1A0A0U1RRL7 71 aa8.02□□□□□ -1.13
HDHD3-203ENST00000485934 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
HDHD3-203ENST00000485934 COX6B2Q6YFQ2 88 aa8.01□□□□□ -1.13
HDHD3-203ENST00000485934 A0A1B0GV90 55 aa8□□□□□ -1.13
HDHD3-203ENST00000485934 FAM240AA0A1B0GVK7 77 aa8□□□□□ -1.13
HDHD3-203ENST00000485934 CXCL6P80162 114 aa8□□□□□ -1.13
HDHD3-203ENST00000485934 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
HDHD3-203ENST00000485934 NDUFS5O43920 106 aa7.97□□□□□ -1.13
HDHD3-203ENST00000485934 LCE2AQ5TA79 106 aaPredicted RBP7.97□□□□□ -1.13
HDHD3-203ENST00000485934 Q8N9L7 120 aa7.96□□□□□ -1.14
HDHD3-203ENST00000485934 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
HDHD3-203ENST00000485934 WFDC13Q8IUB5 93 aa7.93□□□□□ -1.14
HDHD3-203ENST00000485934 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
HDHD3-203ENST00000485934 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
HDHD3-203ENST00000485934 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
HDHD3-203ENST00000485934 J3QR89 54 aa7.91□□□□□ -1.14
HDHD3-203ENST00000485934 ATP5EP2Q5VTU8 51 aa7.91□□□□□ -1.14
HDHD3-203ENST00000485934 SPINK7P58062 85 aa7.9□□□□□ -1.14
HDHD3-203ENST00000485934 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
HDHD3-203ENST00000485934 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
HDHD3-203ENST00000485934 M0R2T5 61 aa7.84□□□□□ -1.15
HDHD3-203ENST00000485934 MT1HP80294 61 aa7.84□□□□□ -1.15
HDHD3-203ENST00000485934 LINC00643Q86TS7 51 aa7.84□□□□□ -1.15
HDHD3-203ENST00000485934 TP53AIP1Q9HCN2 124 aa7.84□□□□□ -1.15
HDHD3-203ENST00000485934 HRES1P13985 223 aa7.83□□□□□ -1.16
HDHD3-203ENST00000485934 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
HDHD3-203ENST00000485934 HIST1H4AP62805 103 aaKnown RBP7.79□□□□□ -1.16
HDHD3-203ENST00000485934 Q5W150 140 aa7.77□□□□□ -1.17
HDHD3-203ENST00000485934 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
HDHD3-203ENST00000485934 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
HDHD3-203ENST00000485934 IGKV2-30P06310 120 aa7.75□□□□□ -1.17
HDHD3-203ENST00000485934 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
HDHD3-203ENST00000485934 K7ERU9 68 aa7.68□□□□□ -1.18
HDHD3-203ENST00000485934 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
HDHD3-203ENST00000485934 UQCRQO14949 82 aa7.65□□□□□ -1.18
HDHD3-203ENST00000485934 TRAV22A0A0B4J277 110 aa7.64□□□□□ -1.19
HDHD3-203ENST00000485934 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
HDHD3-203ENST00000485934 ATOX1O00244 68 aa7.62□□□□□ -1.19
HDHD3-203ENST00000485934 A0A087WVE0 104 aa7.61□□□□□ -1.19
HDHD3-203ENST00000485934 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
HDHD3-203ENST00000485934 LOC101927531A0A1B0GV80 90 aa7.6□□□□□ -1.19
HDHD3-203ENST00000485934 IMUPQ9GZP8 106 aa7.58□□□□□ -1.2
HDHD3-203ENST00000485934 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
HDHD3-203ENST00000485934 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
HDHD3-203ENST00000485934 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
HDHD3-203ENST00000485934 SCGB1A1P11684 91 aa7.56□□□□□ -1.2
HDHD3-203ENST00000485934 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
HDHD3-203ENST00000485934 H0Y9P7 68 aa7.53□□□□□ -1.2
HDHD3-203ENST00000485934 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
HDHD3-203ENST00000485934 MP68P56378 58 aa7.52□□□□□ -1.21
HDHD3-203ENST00000485934 C5orf47Q569G3 176 aa7.51□□□□□ -1.21
HDHD3-203ENST00000485934 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
HDHD3-203ENST00000485934 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
HDHD3-203ENST00000485934 H3BPC8 53 aa7.46□□□□□ -1.22
HDHD3-203ENST00000485934 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
HDHD3-203ENST00000485934 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
HDHD3-203ENST00000485934 SMIM20Q8N5G0 67 aa7.44□□□□□ -1.22
HDHD3-203ENST00000485934 MT-ATP8P03928 68 aa7.43□□□□□ -1.22
HDHD3-203ENST00000485934 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
HDHD3-203ENST00000485934 S4R3F8 94 aa7.39□□□□□ -1.23
HDHD3-203ENST00000485934 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
HDHD3-203ENST00000485934 MT2AP02795 61 aa7.37□□□□□ -1.23
HDHD3-203ENST00000485934 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
HDHD3-203ENST00000485934 A8MUN3 132 aa7.36□□□□□ -1.23
HDHD3-203ENST00000485934 FAM236AA0A1B0GUQ0 79 aa7.35□□□□□ -1.23
HDHD3-203ENST00000485934 FAM236BA0A1B0GV22 79 aa7.35□□□□□ -1.23
HDHD3-203ENST00000485934 TRAV7A0A075B6U4 112 aa7.33□□□□□ -1.24
HDHD3-203ENST00000485934 MT1FP04733 61 aa7.3□□□□□ -1.24
HDHD3-203ENST00000485934 LCA10Q71F78 164 aa7.3□□□□□ -1.24
HDHD3-203ENST00000485934 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
HDHD3-203ENST00000485934 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms