RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
SREBF1-213ENST00000485080 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
SREBF1-213ENST00000485080 SPCS1Q9Y6A9 102 aa9.48□□□□□ -0.89
SREBF1-213ENST00000485080 C14orf132Q9NPU4 83 aa9.47□□□□□ -0.89
SREBF1-213ENST00000485080 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
SREBF1-213ENST00000485080 A8MUU9 505 aa9.44□□□□□ -0.9
SREBF1-213ENST00000485080 J3KT08 172 aa9.44□□□□□ -0.9
SREBF1-213ENST00000485080 LINC00313P59037 77 aa9.43□□□□□ -0.9
SREBF1-213ENST00000485080 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
SREBF1-213ENST00000485080 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
SREBF1-213ENST00000485080 DSCR10P59022 87 aa9.41□□□□□ -0.9
SREBF1-213ENST00000485080 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
SREBF1-213ENST00000485080 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
SREBF1-213ENST00000485080 K7EP34 96 aa9.39□□□□□ -0.91
SREBF1-213ENST00000485080 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
SREBF1-213ENST00000485080 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
SREBF1-213ENST00000485080 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
SREBF1-213ENST00000485080 PRO0461Q9UI25 63 aa9.37□□□□□ -0.91
SREBF1-213ENST00000485080 IGHV6-1A0A0B4J1U7 121 aa9.36□□□□□ -0.91
SREBF1-213ENST00000485080 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
SREBF1-213ENST00000485080 A8MWP4 228 aa9.32□□□□□ -0.92
SREBF1-213ENST00000485080 NDUFB1O75438 58 aa9.32□□□□□ -0.92
SREBF1-213ENST00000485080 NREPQ16612 68 aa9.32□□□□□ -0.92
SREBF1-213ENST00000485080 GTF2H5Q6ZYL4 71 aa9.32□□□□□ -0.92
SREBF1-213ENST00000485080 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
SREBF1-213ENST00000485080 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
SREBF1-213ENST00000485080 F8W1H4 67 aa9.25□□□□□ -0.93
SREBF1-213ENST00000485080 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
SREBF1-213ENST00000485080 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
SREBF1-213ENST00000485080 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
SREBF1-213ENST00000485080 Q6ZVQ6 151 aa9.19□□□□□ -0.94
SREBF1-213ENST00000485080 BPY2O14599 106 aa9.18□□□□□ -0.94
SREBF1-213ENST00000485080 MT1HP80294 61 aa9.15□□□□□ -0.94
SREBF1-213ENST00000485080 MMP24-AS1A0A0U1RRL7 71 aa9.14□□□□□ -0.95
SREBF1-213ENST00000485080 K7EQZ3 153 aa9.14□□□□□ -0.95
SREBF1-213ENST00000485080 ETDBQ3ZM63 59 aa9.14□□□□□ -0.95
SREBF1-213ENST00000485080 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
SREBF1-213ENST00000485080 LINC00846Q9NV44 126 aa9.14□□□□□ -0.95
SREBF1-213ENST00000485080 TMEM254Q8TBM7 123 aa9.13□□□□□ -0.95
SREBF1-213ENST00000485080 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
SREBF1-213ENST00000485080 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
SREBF1-213ENST00000485080 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
SREBF1-213ENST00000485080 hDV103S1A0JD37 113 aa9.09□□□□□ -0.95
SREBF1-213ENST00000485080 A0A1B0GV90 55 aa9.06□□□□□ -0.96
SREBF1-213ENST00000485080 MPLKIPQ8TAP9 179 aa9.06□□□□□ -0.96
SREBF1-213ENST00000485080 HRES1P13985 223 aa9.04□□□□□ -0.96
SREBF1-213ENST00000485080 Q8N9L7 120 aa9.03□□□□□ -0.96
SREBF1-213ENST00000485080 SPINK7P58062 85 aa9□□□□□ -0.97
SREBF1-213ENST00000485080 CXCL6P80162 114 aa8.99□□□□□ -0.97
SREBF1-213ENST00000485080 ACYP1P07311 99 aa8.98□□□□□ -0.97
SREBF1-213ENST00000485080 CASC2Q6XLA1 102 aa8.98□□□□□ -0.97
SREBF1-213ENST00000485080 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
SREBF1-213ENST00000485080 FAM240AA0A1B0GVK7 77 aa8.96□□□□□ -0.98
SREBF1-213ENST00000485080 WFDC13Q8IUB5 93 aa8.95□□□□□ -0.98
SREBF1-213ENST00000485080 HCG22E2RYF7 251 aa8.94□□□□□ -0.98
SREBF1-213ENST00000485080 M0R2T5 61 aa8.94□□□□□ -0.98
SREBF1-213ENST00000485080 NDUFS5O43920 106 aa8.94□□□□□ -0.98
SREBF1-213ENST00000485080 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
SREBF1-213ENST00000485080 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.98
SREBF1-213ENST00000485080 FAM236CP0DP71 79 aa8.9□□□□□ -0.98
SREBF1-213ENST00000485080 KRTAP9-2Q9BYQ4 174 aa8.9□□□□□ -0.98
SREBF1-213ENST00000485080 Q5W150 140 aa8.89□□□□□ -0.99
SREBF1-213ENST00000485080 ATP5EP2Q5VTU8 51 aa8.84□□□□□ -0.99
SREBF1-213ENST00000485080 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
SREBF1-213ENST00000485080 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
SREBF1-213ENST00000485080 TP53AIP1Q9HCN2 124 aa8.8□□□□□ -1
SREBF1-213ENST00000485080 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
SREBF1-213ENST00000485080 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
SREBF1-213ENST00000485080 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
SREBF1-213ENST00000485080 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
SREBF1-213ENST00000485080 J3QR89 54 aa8.69□□□□□ -1.02
SREBF1-213ENST00000485080 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.67□□□□□ -1.02
SREBF1-213ENST00000485080 HIST1H4AP62805 103 aaKnown RBP8.67□□□□□ -1.02
SREBF1-213ENST00000485080 H1FX-AS1Q4G0G2 97 aa8.67□□□□□ -1.02
SREBF1-213ENST00000485080 KRTAP9-6A0A140TA67 174 aa8.63□□□□□ -1.03
SREBF1-213ENST00000485080 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
SREBF1-213ENST00000485080 MT2AP02795 61 aa8.6□□□□□ -1.03
SREBF1-213ENST00000485080 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
SREBF1-213ENST00000485080 A0A087WVE0 104 aa8.58□□□□□ -1.04
SREBF1-213ENST00000485080 UQCRQO14949 82 aa8.58□□□□□ -1.04
SREBF1-213ENST00000485080 CYP4F30PQ9H0H9 118 aa8.56□□□□□ -1.04
SREBF1-213ENST00000485080 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
SREBF1-213ENST00000485080 K7ERU9 68 aa8.54□□□□□ -1.04
SREBF1-213ENST00000485080 FSIP2Q5CZC0 6907 aa8.53□□□□□ -1.04
SREBF1-213ENST00000485080 ATOX1O00244 68 aa8.53□□□□□ -1.04
SREBF1-213ENST00000485080 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
SREBF1-213ENST00000485080 MT1FP04733 61 aa8.52□□□□□ -1.05
SREBF1-213ENST00000485080 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
SREBF1-213ENST00000485080 H0Y9P7 68 aa8.48□□□□□ -1.05
SREBF1-213ENST00000485080 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
SREBF1-213ENST00000485080 KRTAP10-10P60014 251 aa8.47□□□□□ -1.05
SREBF1-213ENST00000485080 KRTAP4-12Q9BQ66 201 aa8.47□□□□□ -1.05
SREBF1-213ENST00000485080 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
SREBF1-213ENST00000485080 LCE3BQ5TA77 95 aa8.46□□□□□ -1.06
SREBF1-213ENST00000485080 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
SREBF1-213ENST00000485080 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
SREBF1-213ENST00000485080 USH2AO75445 5202 aa8.41□□□□□ -1.06
SREBF1-213ENST00000485080 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
SREBF1-213ENST00000485080 S4R3F8 94 aa8.39□□□□□ -1.07
SREBF1-213ENST00000485080 MP68P56378 58 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms