RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
CTSA-207ENST00000484855 hDV103S1A0JD37 113 aa9.61□□□□□ -0.87
CTSA-207ENST00000484855 SPINK1P00995 79 aa9.61□□□□□ -0.87
CTSA-207ENST00000484855 RYR1P21817 5038 aa9.6□□□□□ -0.87
CTSA-207ENST00000484855 LINC00304Q8N9R0 145 aa9.6□□□□□ -0.87
CTSA-207ENST00000484855 C1orf195Q5TG92 126 aa9.59□□□□□ -0.87
CTSA-207ENST00000484855 Q5VSD8 79 aa9.58□□□□□ -0.88
CTSA-207ENST00000484855 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
CTSA-207ENST00000484855 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
CTSA-207ENST00000484855 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
CTSA-207ENST00000484855 SPAG11AQ6PDA7 123 aa9.56□□□□□ -0.88
CTSA-207ENST00000484855 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
CTSA-207ENST00000484855 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
CTSA-207ENST00000484855 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
CTSA-207ENST00000484855 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
CTSA-207ENST00000484855 EPPK1P58107 5090 aaKnown RBP9.51□□□□□ -0.89
CTSA-207ENST00000484855 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
CTSA-207ENST00000484855 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
CTSA-207ENST00000484855 TMEM258P61165 79 aa9.48□□□□□ -0.89
CTSA-207ENST00000484855 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
CTSA-207ENST00000484855 H7BZZ5 65 aa9.47□□□□□ -0.89
CTSA-207ENST00000484855 NDUFS5O43920 106 aa9.47□□□□□ -0.89
CTSA-207ENST00000484855 NDUFC1O43677 76 aa9.46□□□□□ -0.89
CTSA-207ENST00000484855 MP68P56378 58 aa9.46□□□□□ -0.89
CTSA-207ENST00000484855 LINC00313P59037 77 aa9.46□□□□□ -0.89
CTSA-207ENST00000484855 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.89
CTSA-207ENST00000484855 H0Y9P7 68 aa9.45□□□□□ -0.9
CTSA-207ENST00000484855 TNXBP22105 4242 aa9.44□□□□□ -0.9
CTSA-207ENST00000484855 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
CTSA-207ENST00000484855 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
CTSA-207ENST00000484855 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
CTSA-207ENST00000484855 ZCCHC13Q8WW36 166 aaKnown RBP9.42□□□□□ -0.9
CTSA-207ENST00000484855 Q8N1X5 172 aa9.41□□□□□ -0.9
CTSA-207ENST00000484855 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
CTSA-207ENST00000484855 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
CTSA-207ENST00000484855 H3BPC8 53 aa9.39□□□□□ -0.91
CTSA-207ENST00000484855 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
CTSA-207ENST00000484855 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
CTSA-207ENST00000484855 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
CTSA-207ENST00000484855 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
CTSA-207ENST00000484855 C1orf64Q8NEQ6 169 aa9.35□□□□□ -0.91
CTSA-207ENST00000484855 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
CTSA-207ENST00000484855 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
CTSA-207ENST00000484855 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
CTSA-207ENST00000484855 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
CTSA-207ENST00000484855 Q5W150 140 aa9.29□□□□□ -0.92
CTSA-207ENST00000484855 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
CTSA-207ENST00000484855 MYCBP2O75592 4640 aa9.25□□□□□ -0.93
CTSA-207ENST00000484855 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
CTSA-207ENST00000484855 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
CTSA-207ENST00000484855 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
CTSA-207ENST00000484855 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
CTSA-207ENST00000484855 RPS28P62857 69 aaKnown RBP9.19□□□□□ -0.94
CTSA-207ENST00000484855 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
CTSA-207ENST00000484855 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
CTSA-207ENST00000484855 PRR4Q16378 134 aa9.16□□□□□ -0.94
CTSA-207ENST00000484855 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
CTSA-207ENST00000484855 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.95
CTSA-207ENST00000484855 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
CTSA-207ENST00000484855 OXTP01178 125 aa9.14□□□□□ -0.95
CTSA-207ENST00000484855 CYP4F30PQ9H0H9 118 aa9.14□□□□□ -0.95
CTSA-207ENST00000484855 C20orf166-AS1Q96NR2 134 aa9.13□□□□□ -0.95
CTSA-207ENST00000484855 A8MUU9 505 aa9.12□□□□□ -0.95
CTSA-207ENST00000484855 IGKV2-30P06310 120 aa9.11□□□□□ -0.95
CTSA-207ENST00000484855 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
CTSA-207ENST00000484855 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
CTSA-207ENST00000484855 IGKV2D-30A0A075B6S6 120 aa9.06□□□□□ -0.96
CTSA-207ENST00000484855 Q75L30 129 aa9.03□□□□□ -0.96
CTSA-207ENST00000484855 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.97
CTSA-207ENST00000484855 HRES1P13985 223 aa9.01□□□□□ -0.97
CTSA-207ENST00000484855 HERC2O95714 4834 aa9.01□□□□□ -0.97
CTSA-207ENST00000484855 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
CTSA-207ENST00000484855 SMIM26A0A096LP01 95 aa8.96□□□□□ -0.98
CTSA-207ENST00000484855 XP32Q5T750 250 aa8.95□□□□□ -0.98
CTSA-207ENST00000484855 COA5Q86WW8 74 aa8.93□□□□□ -0.98
CTSA-207ENST00000484855 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
CTSA-207ENST00000484855 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
CTSA-207ENST00000484855 J3QL48 77 aa8.9□□□□□ -0.98
CTSA-207ENST00000484855 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
CTSA-207ENST00000484855 ACYP2P14621 99 aa8.86□□□□□ -0.99
CTSA-207ENST00000484855 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
CTSA-207ENST00000484855 SPINK7P58062 85 aa8.86□□□□□ -0.99
CTSA-207ENST00000484855 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
CTSA-207ENST00000484855 C4orf26Q17RF5 130 aa8.8□□□□□ -1
CTSA-207ENST00000484855 LPAP08519 4548 aa8.78□□□□□ -1
CTSA-207ENST00000484855 CHKB-CPT1BH3BT56 60 aa8.75□□□□□ -1.01
CTSA-207ENST00000484855 A8MUN3 132 aa8.75□□□□□ -1.01
CTSA-207ENST00000484855 Q1T7F1 81 aa8.75□□□□□ -1.01
CTSA-207ENST00000484855 LRP2P98164 4655 aa8.73□□□□□ -1.01
CTSA-207ENST00000484855 V9GYY9 64 aa8.7□□□□□ -1.02
CTSA-207ENST00000484855 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
CTSA-207ENST00000484855 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
CTSA-207ENST00000484855 PCLOQ9Y6V0 5065 aa8.63□□□□□ -1.03
CTSA-207ENST00000484855 PSPHP1O15172 72 aa8.62□□□□□ -1.03
CTSA-207ENST00000484855 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
CTSA-207ENST00000484855 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
CTSA-207ENST00000484855 SEC61BP60468 96 aaKnown RBP8.56□□□□□ -1.04
CTSA-207ENST00000484855 Q5VV11 94 aa8.52□□□□□ -1.05
CTSA-207ENST00000484855 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
CTSA-207ENST00000484855 MUC17Q685J3 4493 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms