RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 M0R143 59 aa10.89□□□□□ -0.67
SYPL1-206ENST00000483448 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
SYPL1-206ENST00000483448 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
SYPL1-206ENST00000483448 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
SYPL1-206ENST00000483448 J3KT08 172 aa10.87□□□□□ -0.67
SYPL1-206ENST00000483448 Q6ZQT0 140 aa10.85□□□□□ -0.67
SYPL1-206ENST00000483448 JMJD7-PLA2G4BH0Y9G9 81 aa10.82□□□□□ -0.68
SYPL1-206ENST00000483448 NDUFB1O75438 58 aa10.82□□□□□ -0.68
SYPL1-206ENST00000483448 HRES1P13985 223 aa10.81□□□□□ -0.68
SYPL1-206ENST00000483448 KRTAP9-8Q9BYQ0 159 aa10.78□□□□□ -0.68
SYPL1-206ENST00000483448 ZCCHC13Q8WW36 166 aaKnown RBP10.77□□□□□ -0.69
SYPL1-206ENST00000483448 LOC110117498A0A087WWA1 95 aa10.76□□□□□ -0.69
SYPL1-206ENST00000483448 MPLKIPQ8TAP9 179 aa10.76□□□□□ -0.69
SYPL1-206ENST00000483448 PDE6GP18545 87 aa10.75□□□□□ -0.69
SYPL1-206ENST00000483448 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
SYPL1-206ENST00000483448 A0A1B0GW54 56 aa10.73□□□□□ -0.69
SYPL1-206ENST00000483448 C14orf132Q9NPU4 83 aa10.73□□□□□ -0.69
SYPL1-206ENST00000483448 SMIM6P0DI80 62 aa10.72□□□□□ -0.69
SYPL1-206ENST00000483448 A8MWP4 228 aa10.71□□□□□ -0.69
SYPL1-206ENST00000483448 BATFQ16520 125 aa10.71□□□□□ -0.69
SYPL1-206ENST00000483448 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
SYPL1-206ENST00000483448 C8orf17Q9NRJ1 99 aa10.71□□□□□ -0.69
SYPL1-206ENST00000483448 SPINK7P58062 85 aa10.7□□□□□ -0.7
SYPL1-206ENST00000483448 NREPQ16612 68 aa10.68□□□□□ -0.7
SYPL1-206ENST00000483448 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
SYPL1-206ENST00000483448 IGKV3D-7A0A0C4DH55 119 aa10.67□□□□□ -0.7
SYPL1-206ENST00000483448 TSTD3H0UI37 97 aa10.65□□□□□ -0.7
SYPL1-206ENST00000483448 MT2AP02795 61 aa10.64□□□□□ -0.71
SYPL1-206ENST00000483448 Q6ZVQ6 151 aa10.63□□□□□ -0.71
SYPL1-206ENST00000483448 PRR15Q8IV56 129 aa10.6□□□□□ -0.71
SYPL1-206ENST00000483448 KRTAP10-10P60014 251 aa10.58□□□□□ -0.72
SYPL1-206ENST00000483448 C9orf118A6NHY6 69 aa10.55□□□□□ -0.72
SYPL1-206ENST00000483448 MT1FP04733 61 aa10.55□□□□□ -0.72
SYPL1-206ENST00000483448 WFDC13Q8IUB5 93 aa10.55□□□□□ -0.72
SYPL1-206ENST00000483448 USH2AO75445 5202 aa10.53□□□□□ -0.72
SYPL1-206ENST00000483448 H3BT86 120 aa10.52□□□□□ -0.73
SYPL1-206ENST00000483448 MRPL34Q9BQ48 92 aaKnown RBP10.52□□□□□ -0.73
SYPL1-206ENST00000483448 MMP24-AS1A0A0U1RRL7 71 aa10.51□□□□□ -0.73
SYPL1-206ENST00000483448 TMEM254Q8TBM7 123 aa10.51□□□□□ -0.73
SYPL1-206ENST00000483448 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
SYPL1-206ENST00000483448 NDUFS5O43920 106 aa10.5□□□□□ -0.73
SYPL1-206ENST00000483448 TAX1BP3O14907 124 aa10.49□□□□□ -0.73
SYPL1-206ENST00000483448 hDV103S1A0JD37 113 aa10.48□□□□□ -0.73
SYPL1-206ENST00000483448 K7EQZ3 153 aa10.48□□□□□ -0.73
SYPL1-206ENST00000483448 BPY2O14599 106 aa10.46□□□□□ -0.73
SYPL1-206ENST00000483448 KRTAP9-3Q9BYQ3 159 aa10.45□□□□□ -0.74
SYPL1-206ENST00000483448 LCE2BO14633 110 aa10.42□□□□□ -0.74
SYPL1-206ENST00000483448 SSPOA2VEC9 5147 aa10.41□□□□□ -0.74
SYPL1-206ENST00000483448 LOC105371267A0A1B0GV96 52 aa10.41□□□□□ -0.74
SYPL1-206ENST00000483448 SPCS1Q9Y6A9 102 aa10.37□□□□□ -0.75
SYPL1-206ENST00000483448 IGKV2D-30A0A075B6S6 120 aa10.35□□□□□ -0.75
SYPL1-206ENST00000483448 IGKV2-30P06310 120 aa10.35□□□□□ -0.75
SYPL1-206ENST00000483448 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.33□□□□□ -0.76
SYPL1-206ENST00000483448 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
SYPL1-206ENST00000483448 Q8N9L7 120 aa10.33□□□□□ -0.76
SYPL1-206ENST00000483448 CASC2Q6XLA1 102 aa10.32□□□□□ -0.76
SYPL1-206ENST00000483448 KRTAP19-1Q8IUB9 90 aa10.31□□□□□ -0.76
SYPL1-206ENST00000483448 Q5W150 140 aa10.3□□□□□ -0.76
SYPL1-206ENST00000483448 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
SYPL1-206ENST00000483448 HCG22E2RYF7 251 aa10.28□□□□□ -0.76
SYPL1-206ENST00000483448 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
SYPL1-206ENST00000483448 KRTAP9-7A8MTY7 169 aa10.25□□□□□ -0.77
SYPL1-206ENST00000483448 FCGBPQ9Y6R7 5405 aaPredicted RBP10.24□□□□□ -0.77
SYPL1-206ENST00000483448 UBL5Q9BZL1 73 aa10.23□□□□□ -0.77
SYPL1-206ENST00000483448 COL5A1-AS1Q5SY13 56 aa10.22□□□□□ -0.77
SYPL1-206ENST00000483448 LINC00846Q9NV44 126 aa10.2□□□□□ -0.78
SYPL1-206ENST00000483448 CXCL6P80162 114 aa10.19□□□□□ -0.78
SYPL1-206ENST00000483448 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
SYPL1-206ENST00000483448 PRO0461Q9UI25 63 aa10.16□□□□□ -0.78
SYPL1-206ENST00000483448 K7EP34 96 aa10.15□□□□□ -0.78
SYPL1-206ENST00000483448 KRTAP19-6Q3LI70 58 aa10.06□□□□□ -0.8
SYPL1-206ENST00000483448 GTF2H5Q6ZYL4 71 aa10.04□□□□□ -0.8
SYPL1-206ENST00000483448 C5orf47Q569G3 176 aa10.02□□□□□ -0.81
SYPL1-206ENST00000483448 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
SYPL1-206ENST00000483448 F8W1H4 67 aa9.97□□□□□ -0.81
SYPL1-206ENST00000483448 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
SYPL1-206ENST00000483448 S4R3F8 94 aa9.96□□□□□ -0.82
SYPL1-206ENST00000483448 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
SYPL1-206ENST00000483448 KRTAP3-1Q9BYR8 98 aa9.95□□□□□ -0.82
SYPL1-206ENST00000483448 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
SYPL1-206ENST00000483448 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
SYPL1-206ENST00000483448 MACF1Q9UPN3 7388 aaKnown RBP9.94□□□□□ -0.82
SYPL1-206ENST00000483448 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
SYPL1-206ENST00000483448 CSAG1Q6PB30 78 aa9.9□□□□□ -0.82
SYPL1-206ENST00000483448 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
SYPL1-206ENST00000483448 LCA10Q71F78 164 aa9.86□□□□□ -0.83
SYPL1-206ENST00000483448 CYP4F30PQ9H0H9 118 aa9.78□□□□□ -0.84
SYPL1-206ENST00000483448 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
SYPL1-206ENST00000483448 ACYP1P07311 99 aa9.74□□□□□ -0.85
SYPL1-206ENST00000483448 LOC101927531A0A1B0GV80 90 aa9.71□□□□□ -0.86
SYPL1-206ENST00000483448 Q5VV11 94 aa9.71□□□□□ -0.86
SYPL1-206ENST00000483448 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
SYPL1-206ENST00000483448 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
SYPL1-206ENST00000483448 KLKP1Q107X0 134 aa9.66□□□□□ -0.86
SYPL1-206ENST00000483448 ATP5EP2Q5VTU8 51 aa9.66□□□□□ -0.86
SYPL1-206ENST00000483448 SPRR2GQ9BYE4 73 aa9.66□□□□□ -0.86
SYPL1-206ENST00000483448 A6NN06 94 aa9.65□□□□□ -0.86
SYPL1-206ENST00000483448 MT1BP07438 61 aa9.64□□□□□ -0.87
SYPL1-206ENST00000483448 KRTAP6-3Q3LI67 103 aa9.64□□□□□ -0.87
SYPL1-206ENST00000483448 A0A087WVE0 104 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms