RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
RBM39-233ENST00000482563 HRNRQ86YZ3 2850 aaPredicted RBP1.07□□□□□ -2.24
RBM39-233ENST00000482563 IGLV5-48A0A075B6I7 105 aa1.06□□□□□ -2.24
RBM39-233ENST00000482563 ZZEF1O43149 2961 aa1.06□□□□□ -2.24
RBM39-233ENST00000482563 FLNCQ14315 2725 aa1.06□□□□□ -2.24
RBM39-233ENST00000482563 IGSF10Q6WRI0 2623 aa1.05□□□□□ -2.24
RBM39-233ENST00000482563 VPS13BQ7Z7G8 4022 aa1.03□□□□□ -2.24
RBM39-233ENST00000482563 APC2O95996 2303 aa1.03□□□□□ -2.25
RBM39-233ENST00000482563 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
RBM39-233ENST00000482563 CLTCL1P53675 1640 aa1.01□□□□□ -2.25
RBM39-233ENST00000482563 LPAP08519 4548 aa1.01□□□□□ -2.25
RBM39-233ENST00000482563 FLNBO75369 2602 aaKnown RBP1.01□□□□□ -2.25
RBM39-233ENST00000482563 SPRR2DP22532 72 aa1.01□□□□□ -2.25
RBM39-233ENST00000482563 DCHS2Q6V1P9 2916 aa1.01□□□□□ -2.25
RBM39-233ENST00000482563 GCN1Q92616 2671 aaKnown RBP1□□□□□ -2.25
RBM39-233ENST00000482563 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
RBM39-233ENST00000482563 FAT4Q6V0I7 4981 aa0.97□□□□□ -2.25
RBM39-233ENST00000482563 COL7A1Q02388 2944 aa0.97□□□□□ -2.25
RBM39-233ENST00000482563 NOP10Q9NPE3 64 aaKnown RBP0.96□□□□□ -2.26
RBM39-233ENST00000482563 DMXL1Q9Y485 3027 aa0.96□□□□□ -2.26
RBM39-233ENST00000482563 SACSQ9NZJ4 4579 aa0.94□□□□□ -2.26
RBM39-233ENST00000482563 TENM3Q9P273 2699 aa0.93□□□□□ -2.26
RBM39-233ENST00000482563 PKD1P98161 4303 aa0.93□□□□□ -2.26
RBM39-233ENST00000482563 COL6A3P12111 3177 aa0.93□□□□□ -2.26
RBM39-233ENST00000482563 TACC2O95359 2948 aa0.93□□□□□ -2.26
RBM39-233ENST00000482563 CUBNO60494 3623 aa0.92□□□□□ -2.26
RBM39-233ENST00000482563 DEFB131AP59861 70 aa0.92□□□□□ -2.26
RBM39-233ENST00000482563 SETD2Q9BYW2 2564 aaPredicted RBP0.91□□□□□ -2.26
RBM39-233ENST00000482563 DNAH11Q96DT5 4516 aa0.9□□□□□ -2.26
RBM39-233ENST00000482563 STAB1Q9NY15 2570 aa0.9□□□□□ -2.27
RBM39-233ENST00000482563 HECTD4Q9Y4D8 3996 aa0.89□□□□□ -2.27
RBM39-233ENST00000482563 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
RBM39-233ENST00000482563 UBR4Q5T4S7 5183 aa0.89□□□□□ -2.27
RBM39-233ENST00000482563 SPTBN4Q9H254 2564 aa0.87□□□□□ -2.27
RBM39-233ENST00000482563 MAST4O15021 2626 aa0.87□□□□□ -2.27
RBM39-233ENST00000482563 H3BNG1 76 aa0.86□□□□□ -2.27
RBM39-233ENST00000482563 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
RBM39-233ENST00000482563 HSPG2P98160 4391 aa0.86□□□□□ -2.27
RBM39-233ENST00000482563 TEP1Q99973 2627 aaKnown RBP0.84□□□□□ -2.27
RBM39-233ENST00000482563 C9orf92A6NGG3 77 aa0.84□□□□□ -2.27
RBM39-233ENST00000482563 SPENQ96T58 3664 aaKnown RBP0.84□□□□□ -2.28
RBM39-233ENST00000482563 M0QY20 66 aa0.84□□□□□ -2.28
RBM39-233ENST00000482563 KALRNO60229 2985 aa0.83□□□□□ -2.28
RBM39-233ENST00000482563 SPRR2BP35325 72 aa0.83□□□□□ -2.28
RBM39-233ENST00000482563 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
RBM39-233ENST00000482563 LRRK2Q5S007 2527 aa0.81□□□□□ -2.28
RBM39-233ENST00000482563 DNAH9Q9NYC9 4486 aa0.81□□□□□ -2.28
RBM39-233ENST00000482563 NBEAL2Q6ZNJ1 2754 aa0.8□□□□□ -2.28
RBM39-233ENST00000482563 TENM2Q9NT68 2774 aa0.8□□□□□ -2.28
RBM39-233ENST00000482563 KIAA1109Q2LD37 5005 aa0.8□□□□□ -2.28
RBM39-233ENST00000482563 HMCN2Q8NDA2 5059 aa0.79□□□□□ -2.28
RBM39-233ENST00000482563 USP9XQ93008 2570 aaPredicted RBP0.79□□□□□ -2.28
RBM39-233ENST00000482563 ANKRD11Q6UB99 2663 aaPredicted RBP0.79□□□□□ -2.28
RBM39-233ENST00000482563 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
RBM39-233ENST00000482563 DNAH3Q8TD57 4116 aa0.79□□□□□ -2.28
RBM39-233ENST00000482563 MTORP42345 2549 aa0.78□□□□□ -2.28
RBM39-233ENST00000482563 PCLOQ9Y6V0 5065 aa0.78□□□□□ -2.28
RBM39-233ENST00000482563 SNRPGP62308 76 aaKnown RBP0.78□□□□□ -2.28
RBM39-233ENST00000482563 UTP20O75691 2785 aaKnown RBP0.78□□□□□ -2.28
RBM39-233ENST00000482563 FLNAP21333 2647 aaKnown RBP0.78□□□□□ -2.28
RBM39-233ENST00000482563 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.29
RBM39-233ENST00000482563 DMBT1Q9UGM3 2413 aaPredicted RBP0.78□□□□□ -2.29
RBM39-233ENST00000482563 MUC2Q02817 5179 aa0.78□□□□□ -2.29
RBM39-233ENST00000482563 PKHD1L1Q86WI1 4243 aa0.77□□□□□ -2.29
RBM39-233ENST00000482563 ANKHD1Q8IWZ3 2542 aaKnown RBP0.77□□□□□ -2.29
RBM39-233ENST00000482563 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
RBM39-233ENST00000482563 LRP1BQ9NZR2 4599 aa0.77□□□□□ -2.29
RBM39-233ENST00000482563 COL6A5A8TX70 2615 aa0.77□□□□□ -2.29
RBM39-233ENST00000482563 DUOX1Q9NRD9 1551 aa0.77□□□□□ -2.29
RBM39-233ENST00000482563 RIF1Q5UIP0 2472 aaKnown RBP0.77□□□□□ -2.29
RBM39-233ENST00000482563 RANBP2P49792 3224 aaKnown RBP0.76□□□□□ -2.29
RBM39-233ENST00000482563 ACACAQ13085 2346 aa0.76□□□□□ -2.29
RBM39-233ENST00000482563 FLGP20930 4061 aaPredicted RBP0.75□□□□□ -2.29
RBM39-233ENST00000482563 A8MTW9 85 aa0.74□□□□□ -2.29
RBM39-233ENST00000482563 ANK3Q12955 4377 aaKnown RBP0.74□□□□□ -2.29
RBM39-233ENST00000482563 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
RBM39-233ENST00000482563 MROH2BQ7Z745 1585 aa0.72□□□□□ -2.29
RBM39-233ENST00000482563 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
RBM39-233ENST00000482563 APOBP04114 4563 aaKnown RBP0.72□□□□□ -2.29
RBM39-233ENST00000482563 DNAH2Q9P225 4427 aa0.72□□□□□ -2.29
RBM39-233ENST00000482563 EPG5Q9HCE0 2579 aa0.71□□□□□ -2.3
RBM39-233ENST00000482563 SVEP1Q4LDE5 3571 aa0.71□□□□□ -2.3
RBM39-233ENST00000482563 FASNP49327 2511 aaKnown RBP0.71□□□□□ -2.3
RBM39-233ENST00000482563 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.3
RBM39-233ENST00000482563 DOPEY1Q5JWR5 2465 aa0.71□□□□□ -2.3
RBM39-233ENST00000482563 SPG11Q96JI7 2443 aa0.71□□□□□ -2.3
RBM39-233ENST00000482563 COL12A1Q99715 3063 aa0.7□□□□□ -2.3
RBM39-233ENST00000482563 HTTP42858 3142 aa0.7□□□□□ -2.3
RBM39-233ENST00000482563 CLPSL2Q6UWE3 100 aa0.7□□□□□ -2.3
RBM39-233ENST00000482563 ITPR3Q14573 2671 aa0.7□□□□□ -2.3
RBM39-233ENST00000482563 SRCAPQ6ZRS2 3230 aa0.7□□□□□ -2.3
RBM39-233ENST00000482563 SYNE2Q8WXH0 6885 aaKnown RBP0.69□□□□□ -2.3
RBM39-233ENST00000482563 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
RBM39-233ENST00000482563 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
RBM39-233ENST00000482563 MYO18BQ8IUG5 2567 aa0.68□□□□□ -2.3
RBM39-233ENST00000482563 M0QZ58 72 aa0.68□□□□□ -2.3
RBM39-233ENST00000482563 POLR2KP53803 58 aaKnown RBP0.68□□□□□ -2.3
RBM39-233ENST00000482563 AKAP9Q99996 3911 aa0.67□□□□□ -2.3
RBM39-233ENST00000482563 CHD7Q9P2D1 2997 aa0.67□□□□□ -2.3
RBM39-233ENST00000482563 CCDC168Q8NDH2 2452 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms