RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
ATG4B-220ENST00000482507 PKD1P98161 4303 aa8.87□□□□□ -0.99
ATG4B-220ENST00000482507 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
ATG4B-220ENST00000482507 DNAH5Q8TE73 4624 aa8.87□□□□□ -0.99
ATG4B-220ENST00000482507 PKHD1P08F94 4074 aa8.85□□□□□ -0.99
ATG4B-220ENST00000482507 A0A087X002 238 aa8.84□□□□□ -0.99
ATG4B-220ENST00000482507 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
ATG4B-220ENST00000482507 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
ATG4B-220ENST00000482507 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
ATG4B-220ENST00000482507 A0A1B0GVX0 72 aa8.83□□□□□ -1
ATG4B-220ENST00000482507 ZNF861PO60384 105 aa8.83□□□□□ -1
ATG4B-220ENST00000482507 ZNF706Q9Y5V0 76 aaPredicted RBP8.83□□□□□ -1
ATG4B-220ENST00000482507 A8MUN3 132 aa8.82□□□□□ -1
ATG4B-220ENST00000482507 PCOTHQ58A44 107 aa8.82□□□□□ -1
ATG4B-220ENST00000482507 CD164Q04900 197 aa8.81□□□□□ -1
ATG4B-220ENST00000482507 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
ATG4B-220ENST00000482507 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
ATG4B-220ENST00000482507 Q8N9P0 234 aaPredicted RBP8.79□□□□□ -1
ATG4B-220ENST00000482507 PMAIP1Q13794 54 aa8.78□□□□□ -1
ATG4B-220ENST00000482507 NDUFS5O43920 106 aa8.77□□□□□ -1.01
ATG4B-220ENST00000482507 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
ATG4B-220ENST00000482507 Q5VV11 94 aa8.76□□□□□ -1.01
ATG4B-220ENST00000482507 COA5Q86WW8 74 aa8.76□□□□□ -1.01
ATG4B-220ENST00000482507 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
ATG4B-220ENST00000482507 A8MU10 97 aa8.74□□□□□ -1.01
ATG4B-220ENST00000482507 CDK2AP2O75956 126 aa8.73□□□□□ -1.01
ATG4B-220ENST00000482507 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
ATG4B-220ENST00000482507 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
ATG4B-220ENST00000482507 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
ATG4B-220ENST00000482507 LRP1BQ9NZR2 4599 aa8.72□□□□□ -1.01
ATG4B-220ENST00000482507 Q5W150 140 aa8.69□□□□□ -1.02
ATG4B-220ENST00000482507 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
ATG4B-220ENST00000482507 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
ATG4B-220ENST00000482507 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
ATG4B-220ENST00000482507 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
ATG4B-220ENST00000482507 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
ATG4B-220ENST00000482507 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
ATG4B-220ENST00000482507 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
ATG4B-220ENST00000482507 HRES1P13985 223 aa8.64□□□□□ -1.03
ATG4B-220ENST00000482507 Q6ZSA8 131 aa8.64□□□□□ -1.03
ATG4B-220ENST00000482507 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
ATG4B-220ENST00000482507 LOC101927531A0A1B0GV80 90 aa8.62□□□□□ -1.03
ATG4B-220ENST00000482507 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
ATG4B-220ENST00000482507 Q75L30 129 aa8.59□□□□□ -1.03
ATG4B-220ENST00000482507 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
ATG4B-220ENST00000482507 SMR3BP02814 79 aaPredicted RBP8.58□□□□□ -1.04
ATG4B-220ENST00000482507 KRTAP13-2Q52LG2 175 aa8.58□□□□□ -1.04
ATG4B-220ENST00000482507 LCA10Q71F78 164 aa8.56□□□□□ -1.04
ATG4B-220ENST00000482507 LINC01558Q9Y6Z2 57 aa8.56□□□□□ -1.04
ATG4B-220ENST00000482507 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
ATG4B-220ENST00000482507 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
ATG4B-220ENST00000482507 FAT1Q14517 4588 aa8.54□□□□□ -1.04
ATG4B-220ENST00000482507 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
ATG4B-220ENST00000482507 A6NED7 52 aa8.52□□□□□ -1.05
ATG4B-220ENST00000482507 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
ATG4B-220ENST00000482507 RETNLBQ9BQ08 111 aa8.51□□□□□ -1.05
ATG4B-220ENST00000482507 LINC00313P59037 77 aa8.51□□□□□ -1.05
ATG4B-220ENST00000482507 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
ATG4B-220ENST00000482507 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.05
ATG4B-220ENST00000482507 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.06
ATG4B-220ENST00000482507 SPINK7P58062 85 aa8.46□□□□□ -1.06
ATG4B-220ENST00000482507 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
ATG4B-220ENST00000482507 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
ATG4B-220ENST00000482507 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
ATG4B-220ENST00000482507 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
ATG4B-220ENST00000482507 HSPG2P98160 4391 aa8.43□□□□□ -1.06
ATG4B-220ENST00000482507 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
ATG4B-220ENST00000482507 ACYP2P14621 99 aa8.42□□□□□ -1.06
ATG4B-220ENST00000482507 RYR1P21817 5038 aa8.42□□□□□ -1.06
ATG4B-220ENST00000482507 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
ATG4B-220ENST00000482507 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
ATG4B-220ENST00000482507 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
ATG4B-220ENST00000482507 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
ATG4B-220ENST00000482507 A6NN06 94 aa8.35□□□□□ -1.07
ATG4B-220ENST00000482507 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
ATG4B-220ENST00000482507 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
ATG4B-220ENST00000482507 IGKV2D-30A0A075B6S6 120 aa8.31□□□□□ -1.08
ATG4B-220ENST00000482507 Q5VSD8 79 aa8.3□□□□□ -1.08
ATG4B-220ENST00000482507 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
ATG4B-220ENST00000482507 H3BS24 57 aa8.25□□□□□ -1.09
ATG4B-220ENST00000482507 SPINK1P00995 79 aa8.24□□□□□ -1.09
ATG4B-220ENST00000482507 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
ATG4B-220ENST00000482507 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
ATG4B-220ENST00000482507 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
ATG4B-220ENST00000482507 A0A1B0GU69 56 aa8.22□□□□□ -1.09
ATG4B-220ENST00000482507 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
ATG4B-220ENST00000482507 Q8N1X5 172 aa8.21□□□□□ -1.1
ATG4B-220ENST00000482507 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
ATG4B-220ENST00000482507 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
ATG4B-220ENST00000482507 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
ATG4B-220ENST00000482507 SPATA8Q6RVD6 105 aa8.13□□□□□ -1.11
ATG4B-220ENST00000482507 ABCA13Q86UQ4 5058 aa8.12□□□□□ -1.11
ATG4B-220ENST00000482507 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
ATG4B-220ENST00000482507 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
ATG4B-220ENST00000482507 C9orf92A6NGG3 77 aa8.09□□□□□ -1.11
ATG4B-220ENST00000482507 HERC2O95714 4834 aa8.08□□□□□ -1.12
ATG4B-220ENST00000482507 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
ATG4B-220ENST00000482507 UQCR11O14957 56 aa8.07□□□□□ -1.12
ATG4B-220ENST00000482507 FAT3Q8TDW7 4589 aa8.05□□□□□ -1.12
ATG4B-220ENST00000482507 TNXBP22105 4242 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms