RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 DEFB116Q30KQ4 102 aa6.19□□□□□ -1.42
HMGN1-213ENST00000482192 NAA38Q9BRA0 125 aaKnown RBP6.19□□□□□ -1.42
HMGN1-213ENST00000482192 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
HMGN1-213ENST00000482192 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
HMGN1-213ENST00000482192 LYRM7Q5U5X0 104 aa6.17□□□□□ -1.42
HMGN1-213ENST00000482192 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
HMGN1-213ENST00000482192 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
HMGN1-213ENST00000482192 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
HMGN1-213ENST00000482192 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
HMGN1-213ENST00000482192 M0R2T5 61 aa6.15□□□□□ -1.42
HMGN1-213ENST00000482192 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
HMGN1-213ENST00000482192 J3KT08 172 aa6.14□□□□□ -1.43
HMGN1-213ENST00000482192 BATFQ16520 125 aa6.14□□□□□ -1.43
HMGN1-213ENST00000482192 Q6ZQT0 140 aa6.14□□□□□ -1.43
HMGN1-213ENST00000482192 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
HMGN1-213ENST00000482192 LOC110117498A0A087WWA1 95 aa6.13□□□□□ -1.43
HMGN1-213ENST00000482192 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
HMGN1-213ENST00000482192 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
HMGN1-213ENST00000482192 A0A1B0GW54 56 aa6.12□□□□□ -1.43
HMGN1-213ENST00000482192 PDE6GP18545 87 aa6.12□□□□□ -1.43
HMGN1-213ENST00000482192 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
HMGN1-213ENST00000482192 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-213ENST00000482192 C14orf132Q9NPU4 83 aa6.09□□□□□ -1.43
HMGN1-213ENST00000482192 NDUFB1O75438 58 aa6.08□□□□□ -1.44
HMGN1-213ENST00000482192 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
HMGN1-213ENST00000482192 C9orf118A6NHY6 69 aa6.07□□□□□ -1.44
HMGN1-213ENST00000482192 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
HMGN1-213ENST00000482192 A8MWP4 228 aa6.05□□□□□ -1.44
HMGN1-213ENST00000482192 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
HMGN1-213ENST00000482192 H3BT86 120 aa6.04□□□□□ -1.44
HMGN1-213ENST00000482192 ZCCHC13Q8WW36 166 aaKnown RBP6.02□□□□□ -1.45
HMGN1-213ENST00000482192 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
HMGN1-213ENST00000482192 NREPQ16612 68 aa6.01□□□□□ -1.45
HMGN1-213ENST00000482192 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-213ENST00000482192 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
HMGN1-213ENST00000482192 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
HMGN1-213ENST00000482192 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
HMGN1-213ENST00000482192 FAM236CP0DP71 79 aa6□□□□□ -1.45
HMGN1-213ENST00000482192 HRES1P13985 223 aa6□□□□□ -1.45
HMGN1-213ENST00000482192 MTURNQ8N3F0 131 aa6□□□□□ -1.45
HMGN1-213ENST00000482192 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
HMGN1-213ENST00000482192 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
HMGN1-213ENST00000482192 SPCS1Q9Y6A9 102 aa5.97□□□□□ -1.45
HMGN1-213ENST00000482192 SPINK7P58062 85 aa5.96□□□□□ -1.46
HMGN1-213ENST00000482192 Q6ZVQ6 151 aa5.96□□□□□ -1.46
HMGN1-213ENST00000482192 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
HMGN1-213ENST00000482192 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
HMGN1-213ENST00000482192 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
HMGN1-213ENST00000482192 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
HMGN1-213ENST00000482192 MMP24-AS1A0A0U1RRL7 71 aa5.93□□□□□ -1.46
HMGN1-213ENST00000482192 COL5A1-AS1Q5SY13 56 aa5.93□□□□□ -1.46
HMGN1-213ENST00000482192 TMEM254Q8TBM7 123 aa5.93□□□□□ -1.46
HMGN1-213ENST00000482192 K7EQZ3 153 aa5.92□□□□□ -1.46
HMGN1-213ENST00000482192 BPY2O14599 106 aa5.92□□□□□ -1.46
HMGN1-213ENST00000482192 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
HMGN1-213ENST00000482192 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
HMGN1-213ENST00000482192 hDV103S1A0JD37 113 aa5.9□□□□□ -1.46
HMGN1-213ENST00000482192 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.46
HMGN1-213ENST00000482192 K7EP34 96 aa5.88□□□□□ -1.47
HMGN1-213ENST00000482192 NDUFS5O43920 106 aa5.87□□□□□ -1.47
HMGN1-213ENST00000482192 WFDC13Q8IUB5 93 aa5.87□□□□□ -1.47
HMGN1-213ENST00000482192 PRO0461Q9UI25 63 aa5.86□□□□□ -1.47
HMGN1-213ENST00000482192 Q8N9L7 120 aa5.84□□□□□ -1.47
HMGN1-213ENST00000482192 MT2AP02795 61 aa5.83□□□□□ -1.48
HMGN1-213ENST00000482192 CASC2Q6XLA1 102 aa5.83□□□□□ -1.48
HMGN1-213ENST00000482192 UBL5Q9BZL1 73 aa5.83□□□□□ -1.48
HMGN1-213ENST00000482192 GTF2H5Q6ZYL4 71 aa5.82□□□□□ -1.48
HMGN1-213ENST00000482192 LINC00846Q9NV44 126 aa5.82□□□□□ -1.48
HMGN1-213ENST00000482192 PCP4L1A6NKN8 68 aa5.79□□□□□ -1.48
HMGN1-213ENST00000482192 HCG22E2RYF7 251 aa5.78□□□□□ -1.48
HMGN1-213ENST00000482192 F8W1H4 67 aa5.78□□□□□ -1.48
HMGN1-213ENST00000482192 MT1FP04733 61 aa5.78□□□□□ -1.48
HMGN1-213ENST00000482192 Q5W150 140 aa5.78□□□□□ -1.48
HMGN1-213ENST00000482192 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
HMGN1-213ENST00000482192 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
HMGN1-213ENST00000482192 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
HMGN1-213ENST00000482192 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
HMGN1-213ENST00000482192 CXCL6P80162 114 aa5.76□□□□□ -1.49
HMGN1-213ENST00000482192 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
HMGN1-213ENST00000482192 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
HMGN1-213ENST00000482192 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
HMGN1-213ENST00000482192 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
HMGN1-213ENST00000482192 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
HMGN1-213ENST00000482192 C4orf26Q17RF5 130 aa5.67□□□□□ -1.5
HMGN1-213ENST00000482192 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
HMGN1-213ENST00000482192 ACYP1P07311 99 aa5.63□□□□□ -1.51
HMGN1-213ENST00000482192 FAM240AA0A1B0GVK7 77 aa5.61□□□□□ -1.51
HMGN1-213ENST00000482192 USH2AO75445 5202 aa5.61□□□□□ -1.51
HMGN1-213ENST00000482192 ATP5EP2Q5VTU8 51 aa5.59□□□□□ -1.51
HMGN1-213ENST00000482192 C1orf64Q8NEQ6 169 aa5.57□□□□□ -1.52
HMGN1-213ENST00000482192 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
HMGN1-213ENST00000482192 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
HMGN1-213ENST00000482192 S4R3F8 94 aa5.55□□□□□ -1.52
HMGN1-213ENST00000482192 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
HMGN1-213ENST00000482192 HIST1H4AP62805 103 aaKnown RBP5.54□□□□□ -1.52
HMGN1-213ENST00000482192 C5orf47Q569G3 176 aa5.54□□□□□ -1.52
HMGN1-213ENST00000482192 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
HMGN1-213ENST00000482192 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
HMGN1-213ENST00000482192 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
HMGN1-213ENST00000482192 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms