RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 APCP25054 2843 aa5.78□□□□□ -1.48
SLC1A4-203ENST00000480594 VCANP13611 3396 aa5.76□□□□□ -1.49
SLC1A4-203ENST00000480594 SZT2Q5T011 3432 aa5.74□□□□□ -1.49
SLC1A4-203ENST00000480594 P0C880 135 aa5.74□□□□□ -1.49
SLC1A4-203ENST00000480594 XP32Q5T750 250 aa5.74□□□□□ -1.49
SLC1A4-203ENST00000480594 LAMA1P25391 3075 aa5.72□□□□□ -1.49
SLC1A4-203ENST00000480594 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
SLC1A4-203ENST00000480594 NBEAQ8NFP9 2946 aa5.71□□□□□ -1.5
SLC1A4-203ENST00000480594 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
SLC1A4-203ENST00000480594 COL6A3P12111 3177 aa5.69□□□□□ -1.5
SLC1A4-203ENST00000480594 LRBAP50851 2863 aa5.68□□□□□ -1.5
SLC1A4-203ENST00000480594 FLNCQ14315 2725 aa5.67□□□□□ -1.5
SLC1A4-203ENST00000480594 ATMQ13315 3056 aa5.66□□□□□ -1.5
SLC1A4-203ENST00000480594 A0A1B0GVY2 172 aa5.65□□□□□ -1.5
SLC1A4-203ENST00000480594 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
SLC1A4-203ENST00000480594 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.51
SLC1A4-203ENST00000480594 HIVEP1P15822 2718 aa5.65□□□□□ -1.51
SLC1A4-203ENST00000480594 ASH1LQ9NR48 2969 aaKnown RBP5.64□□□□□ -1.51
SLC1A4-203ENST00000480594 ADGRG4Q8IZF6 3080 aa5.63□□□□□ -1.51
SLC1A4-203ENST00000480594 KRTAP21-3Q3LHN1 58 aa5.63□□□□□ -1.51
SLC1A4-203ENST00000480594 TACC2O95359 2948 aa5.63□□□□□ -1.51
SLC1A4-203ENST00000480594 BOD1L1Q8NFC6 3051 aa5.62□□□□□ -1.51
SLC1A4-203ENST00000480594 REV3LO60673 3130 aa5.62□□□□□ -1.51
SLC1A4-203ENST00000480594 DMXL2Q8TDJ6 3036 aa5.61□□□□□ -1.51
SLC1A4-203ENST00000480594 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
SLC1A4-203ENST00000480594 COL12A1Q99715 3063 aa5.59□□□□□ -1.52
SLC1A4-203ENST00000480594 SPEGQ15772 3267 aa5.58□□□□□ -1.52
SLC1A4-203ENST00000480594 EYSQ5T1H1 3165 aa5.58□□□□□ -1.52
SLC1A4-203ENST00000480594 CFAP47Q6ZTR5 3102 aa5.57□□□□□ -1.52
SLC1A4-203ENST00000480594 FRYLO94915 3013 aa5.57□□□□□ -1.52
SLC1A4-203ENST00000480594 SPTBN5Q9NRC6 3674 aaKnown RBP5.56□□□□□ -1.52
SLC1A4-203ENST00000480594 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
SLC1A4-203ENST00000480594 ZZEF1O43149 2961 aa5.53□□□□□ -1.52
SLC1A4-203ENST00000480594 CELSR2Q9HCU4 2923 aa5.51□□□□□ -1.53
SLC1A4-203ENST00000480594 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
SLC1A4-203ENST00000480594 HRNRQ86YZ3 2850 aaPredicted RBP5.46□□□□□ -1.53
SLC1A4-203ENST00000480594 CRYBG3Q68DQ2 2970 aa5.46□□□□□ -1.53
SLC1A4-203ENST00000480594 MYO15AQ9UKN7 3530 aa5.45□□□□□ -1.54
SLC1A4-203ENST00000480594 DCHS2Q6V1P9 2916 aa5.45□□□□□ -1.54
SLC1A4-203ENST00000480594 USP34Q70CQ2 3546 aa5.44□□□□□ -1.54
SLC1A4-203ENST00000480594 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
SLC1A4-203ENST00000480594 TENM4Q6N022 2769 aa5.44□□□□□ -1.54
SLC1A4-203ENST00000480594 ZANQ9Y493 2812 aa5.43□□□□□ -1.54
SLC1A4-203ENST00000480594 TGP01266 2768 aa5.38□□□□□ -1.55
SLC1A4-203ENST00000480594 TNRC18O15417 2968 aaPredicted RBP5.38□□□□□ -1.55
SLC1A4-203ENST00000480594 KRTAP13-4Q3LI77 160 aa5.36□□□□□ -1.55
SLC1A4-203ENST00000480594 KRTAP12-1P59990 96 aa5.36□□□□□ -1.55
SLC1A4-203ENST00000480594 FBN2P35556 2912 aa5.32□□□□□ -1.56
SLC1A4-203ENST00000480594 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
SLC1A4-203ENST00000480594 DMXL1Q9Y485 3027 aa5.29□□□□□ -1.56
SLC1A4-203ENST00000480594 NF1P21359 2839 aa5.28□□□□□ -1.56
SLC1A4-203ENST00000480594 LOC400499M0QZD8 3231 aa5.28□□□□□ -1.56
SLC1A4-203ENST00000480594 MUC3AQ02505 3323 aa5.27□□□□□ -1.57
SLC1A4-203ENST00000480594 TENM1Q9UKZ4 2725 aa5.24□□□□□ -1.57
SLC1A4-203ENST00000480594 TENM3Q9P273 2699 aa5.24□□□□□ -1.57
SLC1A4-203ENST00000480594 CELSR1Q9NYQ6 3014 aa5.21□□□□□ -1.57
SLC1A4-203ENST00000480594 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
SLC1A4-203ENST00000480594 WDFY3Q8IZQ1 3526 aa5.19□□□□□ -1.58
SLC1A4-203ENST00000480594 DMDP11532 3685 aa5.18□□□□□ -1.58
SLC1A4-203ENST00000480594 TENM2Q9NT68 2774 aa5.17□□□□□ -1.58
SLC1A4-203ENST00000480594 MXRA5Q9NR99 2828 aa5.17□□□□□ -1.58
SLC1A4-203ENST00000480594 ASPMQ8IZT6 3477 aa5.15□□□□□ -1.59
SLC1A4-203ENST00000480594 RELNP78509 3460 aa5.14□□□□□ -1.59
SLC1A4-203ENST00000480594 ZFHX4Q86UP3 3567 aa5.12□□□□□ -1.59
SLC1A4-203ENST00000480594 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
SLC1A4-203ENST00000480594 DCHS1Q96JQ0 3298 aa5.08□□□□□ -1.6
SLC1A4-203ENST00000480594 CSMD1Q96PZ7 3565 aa5.05□□□□□ -1.6
SLC1A4-203ENST00000480594 LAMA5O15230 3695 aa5.03□□□□□ -1.6
SLC1A4-203ENST00000480594 PDZD2O15018 2839 aa5.03□□□□□ -1.6
SLC1A4-203ENST00000480594 KRTAP3-2Q9BYR7 98 aa5.01□□□□□ -1.61
SLC1A4-203ENST00000480594 INE1O15225 51 aa5.01□□□□□ -1.61
SLC1A4-203ENST00000480594 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
SLC1A4-203ENST00000480594 NBPF19A0A087WUL8 3843 aa4.97□□□□□ -1.61
SLC1A4-203ENST00000480594 SMG1Q96Q15 3661 aaKnown RBP4.95□□□□□ -1.62
SLC1A4-203ENST00000480594 PKD1L1Q8TDX9 2849 aa4.93□□□□□ -1.62
SLC1A4-203ENST00000480594 VWFP04275 2813 aa4.9□□□□□ -1.62
SLC1A4-203ENST00000480594 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
SLC1A4-203ENST00000480594 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
SLC1A4-203ENST00000480594 SVEP1Q4LDE5 3571 aa4.85□□□□□ -1.63
SLC1A4-203ENST00000480594 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
SLC1A4-203ENST00000480594 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
SLC1A4-203ENST00000480594 ANK3Q12955 4377 aaKnown RBP4.82□□□□□ -1.64
SLC1A4-203ENST00000480594 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
SLC1A4-203ENST00000480594 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
SLC1A4-203ENST00000480594 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
SLC1A4-203ENST00000480594 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
SLC1A4-203ENST00000480594 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
SLC1A4-203ENST00000480594 FBN1P35555 2871 aaKnown RBP4.77□□□□□ -1.65
SLC1A4-203ENST00000480594 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
SLC1A4-203ENST00000480594 CUBNO60494 3623 aa4.73□□□□□ -1.65
SLC1A4-203ENST00000480594 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
SLC1A4-203ENST00000480594 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.66
SLC1A4-203ENST00000480594 CSMD2Q7Z408 3487 aa4.7□□□□□ -1.66
SLC1A4-203ENST00000480594 BSNQ9UPA5 3926 aa4.69□□□□□ -1.66
SLC1A4-203ENST00000480594 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
SLC1A4-203ENST00000480594 TRRAPQ9Y4A5 3859 aa4.66□□□□□ -1.66
SLC1A4-203ENST00000480594 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
SLC1A4-203ENST00000480594 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
SLC1A4-203ENST00000480594 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
SLC1A4-203ENST00000480594 VPS13CQ709C8 3753 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms