RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
TTC3-216ENST00000479930 USP34Q70CQ2 3546 aa5.05□□□□□ -1.6
TTC3-216ENST00000479930 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
TTC3-216ENST00000479930 C5orf42Q9H799 3197 aa5.04□□□□□ -1.6
TTC3-216ENST00000479930 KRTAP1-5Q9BYS1 174 aa5.03□□□□□ -1.6
TTC3-216ENST00000479930 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
TTC3-216ENST00000479930 DMXL1Q9Y485 3027 aa5.03□□□□□ -1.6
TTC3-216ENST00000479930 OCR1Q9BZK8 76 aa5.01□□□□□ -1.61
TTC3-216ENST00000479930 GOLGB1Q14789 3259 aaKnown RBP5□□□□□ -1.61
TTC3-216ENST00000479930 COL12A1Q99715 3063 aa5□□□□□ -1.61
TTC3-216ENST00000479930 FBN1P35555 2871 aaKnown RBP5□□□□□ -1.61
TTC3-216ENST00000479930 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
TTC3-216ENST00000479930 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
TTC3-216ENST00000479930 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
TTC3-216ENST00000479930 SPRR1AP35321 89 aa4.94□□□□□ -1.62
TTC3-216ENST00000479930 Q5VV11 94 aa4.93□□□□□ -1.62
TTC3-216ENST00000479930 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
TTC3-216ENST00000479930 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
TTC3-216ENST00000479930 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
TTC3-216ENST00000479930 BOD1L1Q8NFC6 3051 aa4.91□□□□□ -1.62
TTC3-216ENST00000479930 WDFY4Q6ZS81 3184 aa4.9□□□□□ -1.62
TTC3-216ENST00000479930 RANBP2P49792 3224 aaKnown RBP4.89□□□□□ -1.63
TTC3-216ENST00000479930 ATMQ13315 3056 aa4.87□□□□□ -1.63
TTC3-216ENST00000479930 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
TTC3-216ENST00000479930 CFAP47Q6ZTR5 3102 aa4.83□□□□□ -1.64
TTC3-216ENST00000479930 XIRP2A4UGR9 3374 aa4.83□□□□□ -1.64
TTC3-216ENST00000479930 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
TTC3-216ENST00000479930 CELSR1Q9NYQ6 3014 aa4.83□□□□□ -1.64
TTC3-216ENST00000479930 ADGRG4Q8IZF6 3080 aa4.83□□□□□ -1.64
TTC3-216ENST00000479930 AKAP9Q99996 3911 aa4.82□□□□□ -1.64
TTC3-216ENST00000479930 A6NN06 94 aa4.82□□□□□ -1.64
TTC3-216ENST00000479930 OTOGQ6ZRI0 2925 aa4.8□□□□□ -1.64
TTC3-216ENST00000479930 UTRNP46939 3433 aa4.8□□□□□ -1.64
TTC3-216ENST00000479930 NBPF19A0A087WUL8 3843 aa4.79□□□□□ -1.64
TTC3-216ENST00000479930 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
TTC3-216ENST00000479930 HTTP42858 3142 aa4.77□□□□□ -1.65
TTC3-216ENST00000479930 XP32Q5T750 250 aa4.77□□□□□ -1.65
TTC3-216ENST00000479930 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
TTC3-216ENST00000479930 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
TTC3-216ENST00000479930 DMDP11532 3685 aa4.76□□□□□ -1.65
TTC3-216ENST00000479930 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
TTC3-216ENST00000479930 FREM2Q5SZK8 3169 aa4.74□□□□□ -1.65
TTC3-216ENST00000479930 H0YAA0 97 aa4.73□□□□□ -1.65
TTC3-216ENST00000479930 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
TTC3-216ENST00000479930 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
TTC3-216ENST00000479930 Q5XG85 94 aa4.71□□□□□ -1.66
TTC3-216ENST00000479930 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
TTC3-216ENST00000479930 SPENQ96T58 3664 aaKnown RBP4.67□□□□□ -1.66
TTC3-216ENST00000479930 SPTBN5Q9NRC6 3674 aaKnown RBP4.65□□□□□ -1.66
TTC3-216ENST00000479930 KRTAP11-1Q8IUC1 163 aa4.65□□□□□ -1.66
TTC3-216ENST00000479930 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.67
TTC3-216ENST00000479930 REV3LO60673 3130 aa4.53□□□□□ -1.68
TTC3-216ENST00000479930 BSNQ9UPA5 3926 aa4.52□□□□□ -1.69
TTC3-216ENST00000479930 COL6A3P12111 3177 aa4.52□□□□□ -1.69
TTC3-216ENST00000479930 DNAH14Q0VDD8 3507 aa4.51□□□□□ -1.69
TTC3-216ENST00000479930 FBN3Q75N90 2809 aa4.5□□□□□ -1.69
TTC3-216ENST00000479930 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
TTC3-216ENST00000479930 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
TTC3-216ENST00000479930 LAMA3Q16787 3333 aa4.44□□□□□ -1.7
TTC3-216ENST00000479930 LAMA5O15230 3695 aa4.44□□□□□ -1.7
TTC3-216ENST00000479930 MKI67P46013 3256 aaKnown RBP4.43□□□□□ -1.7
TTC3-216ENST00000479930 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
TTC3-216ENST00000479930 LOC400499M0QZD8 3231 aa4.37□□□□□ -1.71
TTC3-216ENST00000479930 VPS13CQ709C8 3753 aa4.35□□□□□ -1.71
TTC3-216ENST00000479930 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
TTC3-216ENST00000479930 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
TTC3-216ENST00000479930 MYO15AQ9UKN7 3530 aa4.34□□□□□ -1.71
TTC3-216ENST00000479930 UNC80Q8N2C7 3258 aa4.33□□□□□ -1.72
TTC3-216ENST00000479930 SPEGQ15772 3267 aa4.32□□□□□ -1.72
TTC3-216ENST00000479930 VCANP13611 3396 aa4.31□□□□□ -1.72
TTC3-216ENST00000479930 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
TTC3-216ENST00000479930 EYSQ5T1H1 3165 aa4.3□□□□□ -1.72
TTC3-216ENST00000479930 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
TTC3-216ENST00000479930 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
TTC3-216ENST00000479930 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
TTC3-216ENST00000479930 CELSR3Q9NYQ7 3312 aa4.28□□□□□ -1.72
TTC3-216ENST00000479930 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
TTC3-216ENST00000479930 LYSTQ99698 3801 aa4.27□□□□□ -1.73
TTC3-216ENST00000479930 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
TTC3-216ENST00000479930 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
TTC3-216ENST00000479930 CMYA5Q8N3K9 4069 aa4.27□□□□□ -1.73
TTC3-216ENST00000479930 SZT2Q5T011 3432 aa4.26□□□□□ -1.73
TTC3-216ENST00000479930 DNAH3Q8TD57 4116 aa4.25□□□□□ -1.73
TTC3-216ENST00000479930 BRCA2P51587 3418 aa4.24□□□□□ -1.73
TTC3-216ENST00000479930 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
TTC3-216ENST00000479930 ANK2Q01484 3957 aa4.23□□□□□ -1.73
TTC3-216ENST00000479930 SMG1Q96Q15 3661 aaKnown RBP4.19□□□□□ -1.74
TTC3-216ENST00000479930 CDH23Q9H251 3354 aa4.16□□□□□ -1.74
TTC3-216ENST00000479930 WDFY3Q8IZQ1 3526 aa4.16□□□□□ -1.74
TTC3-216ENST00000479930 ZFHX4Q86UP3 3567 aa4.14□□□□□ -1.75
TTC3-216ENST00000479930 RELNP78509 3460 aa4.08□□□□□ -1.76
TTC3-216ENST00000479930 ZNF469Q96JG9 3925 aaPredicted RBP4.05□□□□□ -1.76
TTC3-216ENST00000479930 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
TTC3-216ENST00000479930 INE1O15225 51 aa4.02□□□□□ -1.77
TTC3-216ENST00000479930 ASPMQ8IZT6 3477 aa4.02□□□□□ -1.77
TTC3-216ENST00000479930 DCHS1Q96JQ0 3298 aa4.01□□□□□ -1.77
TTC3-216ENST00000479930 KRTAP12-1P59990 96 aa4□□□□□ -1.77
TTC3-216ENST00000479930 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
TTC3-216ENST00000479930 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
TTC3-216ENST00000479930 ALMS1Q8TCU4 4167 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms