RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MIEN1Q9BRT3 115 aa2.48□□□□□ -2.01
UPF3A-205ENST00000479712 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
UPF3A-205ENST00000479712 TRBV10-3A0A0K0K1G6 114 aa2.47□□□□□ -2.01
UPF3A-205ENST00000479712 ETDCA0A1B0GVM5 59 aa2.47□□□□□ -2.01
UPF3A-205ENST00000479712 TMEM238C9JI98 176 aa2.47□□□□□ -2.01
UPF3A-205ENST00000479712 DDTP30046 118 aa2.47□□□□□ -2.01
UPF3A-205ENST00000479712 COPS9Q8WXC6 57 aa2.47□□□□□ -2.01
UPF3A-205ENST00000479712 SPANXCQ9NY87 97 aa2.47□□□□□ -2.01
UPF3A-205ENST00000479712 NCR3O14931 201 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 IFITM1P13164 125 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 PRLHP81277 87 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 JOSD1Q15040 202 aaPredicted RBP2.46□□□□□ -2.02
UPF3A-205ENST00000479712 SPAG11AQ6PDA7 123 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 LINC00308Q8TCZ7 52 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 SPRR4Q96PI1 79 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 SPANXDQ9BXN6 97 aa2.46□□□□□ -2.02
UPF3A-205ENST00000479712 TRAV23DV6A0A075B6W5 121 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 ZNF815PA8K554 130 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 ZNF73O43830 326 aaPredicted RBP2.45□□□□□ -2.02
UPF3A-205ENST00000479712 SPRR2EP22531 72 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 SPRR2BP35325 72 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 SPRR2AP35326 72 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 KRTDAPP60985 99 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 RPS29P62273 56 aaKnown RBP2.45□□□□□ -2.02
UPF3A-205ENST00000479712 S100A7L2Q5SY68 101 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 SOSTDC1Q6X4U4 206 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 Q6ZRX8 168 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 DAND5Q8N907 189 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 SMCR5Q8TEV8 140 aa2.45□□□□□ -2.02
UPF3A-205ENST00000479712 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
UPF3A-205ENST00000479712 HINT1P49773 126 aaPredicted RBP2.44□□□□□ -2.02
UPF3A-205ENST00000479712 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
UPF3A-205ENST00000479712 SSBP3-AS1Q7Z2R9 100 aa2.44□□□□□ -2.02
UPF3A-205ENST00000479712 HIST3H2BBQ8N257 126 aa2.44□□□□□ -2.02
UPF3A-205ENST00000479712 C20orf166-AS1Q96NR2 134 aa2.44□□□□□ -2.02
UPF3A-205ENST00000479712 HIST1H2BLQ99880 126 aa2.44□□□□□ -2.02
UPF3A-205ENST00000479712 SPINK1P00995 79 aa2.43□□□□□ -2.02
UPF3A-205ENST00000479712 S100A6P06703 90 aa2.43□□□□□ -2.02
UPF3A-205ENST00000479712 SPRR1BP22528 89 aa2.43□□□□□ -2.02
UPF3A-205ENST00000479712 FP248Q71RG6 208 aaPredicted RBP2.43□□□□□ -2.02
UPF3A-205ENST00000479712 Q9BRP9 147 aa2.43□□□□□ -2.02
UPF3A-205ENST00000479712 ELOF1P60002 83 aaKnown RBP2.42□□□□□ -2.02
UPF3A-205ENST00000479712 COX6B2Q6YFQ2 88 aa2.42□□□□□ -2.02
UPF3A-205ENST00000479712 TTTY13Q9BZ97 58 aa2.42□□□□□ -2.02
UPF3A-205ENST00000479712 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
UPF3A-205ENST00000479712 TRAV13-2A0A0B4J235 113 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 DLEU1O43261 78 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 COX7BP24311 80 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 NPC2P61916 151 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 OR13C6PQ8NH95 151 aa2.41□□□□□ -2.02
UPF3A-205ENST00000479712 NHP2Q9NX24 153 aaKnown RBP2.41□□□□□ -2.02
UPF3A-205ENST00000479712 MUSTN1Q8IVN3 82 aa2.4□□□□□ -2.03
UPF3A-205ENST00000479712 ATOH7Q8N100 152 aa2.4□□□□□ -2.03
UPF3A-205ENST00000479712 IGLV5-48A0A075B6I7 105 aa2.39□□□□□ -2.03
UPF3A-205ENST00000479712 TEX49A0A1B0GTD5 131 aa2.39□□□□□ -2.03
UPF3A-205ENST00000479712 MT2AP02795 61 aa2.39□□□□□ -2.03
UPF3A-205ENST00000479712 COX8AP10176 69 aa2.39□□□□□ -2.03
UPF3A-205ENST00000479712 HIGD1BQ9P298 99 aa2.39□□□□□ -2.03
UPF3A-205ENST00000479712 LAMTOR3Q9UHA4 124 aa2.39□□□□□ -2.03
UPF3A-205ENST00000479712 MT1FP04733 61 aa2.38□□□□□ -2.03
UPF3A-205ENST00000479712 SPRR2DP22532 72 aa2.38□□□□□ -2.03
UPF3A-205ENST00000479712 Q5XG85 94 aa2.38□□□□□ -2.03
UPF3A-205ENST00000479712 PPDPFLQ8WWR9 84 aa2.38□□□□□ -2.03
UPF3A-205ENST00000479712 BVES-AS1Q5T3Y7 98 aa2.37□□□□□ -2.03
UPF3A-205ENST00000479712 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
UPF3A-205ENST00000479712 C1orf195Q5TG92 126 aa2.37□□□□□ -2.03
UPF3A-205ENST00000479712 SMIM11BQ8TCY0 68 aa2.37□□□□□ -2.03
UPF3A-205ENST00000479712 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
UPF3A-205ENST00000479712 PRO1933Q9H354 126 aa2.37□□□□□ -2.03
UPF3A-205ENST00000479712 H3BPC8 53 aa2.36□□□□□ -2.03
UPF3A-205ENST00000479712 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
UPF3A-205ENST00000479712 A0A1B0GX51 115 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 hADV29S1A0JD25 119 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 H0YGX0 51 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 H7C2G1 150 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 SPATA45Q537H7 98 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 OCIAD2Q56VL3 154 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 Q6JHZ5 121 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.35□□□□□ -2.03
UPF3A-205ENST00000479712 VAMP8Q9BV40 100 aa2.35□□□□□ -2.03
UPF3A-205ENST00000479712 F8WEM9 126 aa2.34□□□□□ -2.03
UPF3A-205ENST00000479712 SNCGO76070 127 aa2.34□□□□□ -2.03
UPF3A-205ENST00000479712 BATFQ16520 125 aa2.34□□□□□ -2.03
UPF3A-205ENST00000479712 C2orf91Q6ZV80 131 aa2.34□□□□□ -2.03
UPF3A-205ENST00000479712 ZCCHC13Q8WW36 166 aaKnown RBP2.34□□□□□ -2.03
UPF3A-205ENST00000479712 TCL1BO95988 128 aa2.33□□□□□ -2.04
UPF3A-205ENST00000479712 Q6ZQY7 126 aa2.33□□□□□ -2.04
UPF3A-205ENST00000479712 DEFB105AQ8NG35 78 aa2.33□□□□□ -2.04
UPF3A-205ENST00000479712 RAB37Q96AX2 223 aa2.33□□□□□ -2.04
UPF3A-205ENST00000479712 C14orf144Q96I85 54 aa2.33□□□□□ -2.04
UPF3A-205ENST00000479712 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
UPF3A-205ENST00000479712 HSD52Q0P140 79 aa2.32□□□□□ -2.04
UPF3A-205ENST00000479712 PYY3Q5JQD4 70 aa2.32□□□□□ -2.04
UPF3A-205ENST00000479712 Q6Q795 121 aa2.32□□□□□ -2.04
UPF3A-205ENST00000479712 CLEC2BQ92478 149 aa2.32□□□□□ -2.04
UPF3A-205ENST00000479712 PRO1854Q9UHT4 67 aa2.32□□□□□ -2.04
UPF3A-205ENST00000479712 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
UPF3A-205ENST00000479712 C12orf57Q99622 126 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms