RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 USH2AO75445 5202 aa8.68□□□□□ -1.02
ECHDC1-216ENST00000479525 SMIM6P0DI80 62 aa8.68□□□□□ -1.02
ECHDC1-216ENST00000479525 MT2AP02795 61 aa8.67□□□□□ -1.02
ECHDC1-216ENST00000479525 H3BQ85 93 aa8.66□□□□□ -1.02
ECHDC1-216ENST00000479525 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-216ENST00000479525 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
ECHDC1-216ENST00000479525 MPLKIPQ8TAP9 179 aa8.65□□□□□ -1.02
ECHDC1-216ENST00000479525 SSPOA2VEC9 5147 aa8.65□□□□□ -1.03
ECHDC1-216ENST00000479525 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-216ENST00000479525 M0R143 59 aa8.63□□□□□ -1.03
ECHDC1-216ENST00000479525 MT1FP04733 61 aa8.63□□□□□ -1.03
ECHDC1-216ENST00000479525 RBM12B-AS1Q9P1G2 102 aa8.63□□□□□ -1.03
ECHDC1-216ENST00000479525 BAALC-AS2P0C853 105 aa8.62□□□□□ -1.03
ECHDC1-216ENST00000479525 DSCR8Q96T75 97 aa8.62□□□□□ -1.03
ECHDC1-216ENST00000479525 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
ECHDC1-216ENST00000479525 C8orf87E5RJ46 101 aa8.59□□□□□ -1.03
ECHDC1-216ENST00000479525 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
ECHDC1-216ENST00000479525 C9JAW5 83 aa8.57□□□□□ -1.04
ECHDC1-216ENST00000479525 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
ECHDC1-216ENST00000479525 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-216ENST00000479525 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
ECHDC1-216ENST00000479525 Q6ZQT0 140 aa8.54□□□□□ -1.04
ECHDC1-216ENST00000479525 SPINK7P58062 85 aa8.52□□□□□ -1.05
ECHDC1-216ENST00000479525 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
ECHDC1-216ENST00000479525 ATXN8Q156A1 80 aa8.5□□□□□ -1.05
ECHDC1-216ENST00000479525 BATFQ16520 125 aa8.5□□□□□ -1.05
ECHDC1-216ENST00000479525 J3KT08 172 aa8.49□□□□□ -1.05
ECHDC1-216ENST00000479525 C8orf17Q9NRJ1 99 aa8.49□□□□□ -1.05
ECHDC1-216ENST00000479525 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
ECHDC1-216ENST00000479525 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
ECHDC1-216ENST00000479525 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
ECHDC1-216ENST00000479525 NDUFB1O75438 58 aa8.47□□□□□ -1.05
ECHDC1-216ENST00000479525 LYRM7Q5U5X0 104 aa8.47□□□□□ -1.05
ECHDC1-216ENST00000479525 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
ECHDC1-216ENST00000479525 WFDC13Q8IUB5 93 aa8.46□□□□□ -1.06
ECHDC1-216ENST00000479525 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-216ENST00000479525 A8MWP4 228 aa8.45□□□□□ -1.06
ECHDC1-216ENST00000479525 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
ECHDC1-216ENST00000479525 FCGBPQ9Y6R7 5405 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-216ENST00000479525 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
ECHDC1-216ENST00000479525 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
ECHDC1-216ENST00000479525 Q6ZVQ6 151 aa8.41□□□□□ -1.06
ECHDC1-216ENST00000479525 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
ECHDC1-216ENST00000479525 C9orf118A6NHY6 69 aa8.38□□□□□ -1.07
ECHDC1-216ENST00000479525 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
ECHDC1-216ENST00000479525 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
ECHDC1-216ENST00000479525 NREPQ16612 68 aa8.35□□□□□ -1.07
ECHDC1-216ENST00000479525 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
ECHDC1-216ENST00000479525 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
ECHDC1-216ENST00000479525 K7EQZ3 153 aa8.33□□□□□ -1.08
ECHDC1-216ENST00000479525 NDUFS5O43920 106 aa8.32□□□□□ -1.08
ECHDC1-216ENST00000479525 PDE6GP18545 87 aa8.32□□□□□ -1.08
ECHDC1-216ENST00000479525 MRPL34Q9BQ48 92 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-216ENST00000479525 TMEM254Q8TBM7 123 aa8.3□□□□□ -1.08
ECHDC1-216ENST00000479525 A0A1B0GW54 56 aa8.29□□□□□ -1.08
ECHDC1-216ENST00000479525 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
ECHDC1-216ENST00000479525 H3BT86 120 aa8.27□□□□□ -1.09
ECHDC1-216ENST00000479525 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
ECHDC1-216ENST00000479525 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
ECHDC1-216ENST00000479525 Q5W150 140 aa8.24□□□□□ -1.09
ECHDC1-216ENST00000479525 Q8N9L7 120 aa8.24□□□□□ -1.09
ECHDC1-216ENST00000479525 SPCS1Q9Y6A9 102 aa8.23□□□□□ -1.09
ECHDC1-216ENST00000479525 COL5A1-AS1Q5SY13 56 aa8.22□□□□□ -1.09
ECHDC1-216ENST00000479525 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
ECHDC1-216ENST00000479525 BPY2O14599 106 aa8.19□□□□□ -1.1
ECHDC1-216ENST00000479525 KRTAP19-6Q3LI70 58 aa8.19□□□□□ -1.1
ECHDC1-216ENST00000479525 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
ECHDC1-216ENST00000479525 HCG22E2RYF7 251 aa8.15□□□□□ -1.1
ECHDC1-216ENST00000479525 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
ECHDC1-216ENST00000479525 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
ECHDC1-216ENST00000479525 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
ECHDC1-216ENST00000479525 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
ECHDC1-216ENST00000479525 K7EP34 96 aa8.11□□□□□ -1.11
ECHDC1-216ENST00000479525 PRO0461Q9UI25 63 aa8.09□□□□□ -1.12
ECHDC1-216ENST00000479525 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-216ENST00000479525 LINC00846Q9NV44 126 aa8.07□□□□□ -1.12
ECHDC1-216ENST00000479525 GTF2H5Q6ZYL4 71 aa8.05□□□□□ -1.12
ECHDC1-216ENST00000479525 C5orf47Q569G3 176 aa8.04□□□□□ -1.12
ECHDC1-216ENST00000479525 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-216ENST00000479525 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
ECHDC1-216ENST00000479525 F8W1H4 67 aa7.97□□□□□ -1.13
ECHDC1-216ENST00000479525 CXCL6P80162 114 aa7.97□□□□□ -1.13
ECHDC1-216ENST00000479525 UBL5Q9BZL1 73 aa7.97□□□□□ -1.13
ECHDC1-216ENST00000479525 FAM236AA0A1B0GUQ0 79 aa7.96□□□□□ -1.14
ECHDC1-216ENST00000479525 FAM236BA0A1B0GV22 79 aa7.96□□□□□ -1.14
ECHDC1-216ENST00000479525 ETDBQ3ZM63 59 aa7.93□□□□□ -1.14
ECHDC1-216ENST00000479525 S4R3F8 94 aa7.93□□□□□ -1.14
ECHDC1-216ENST00000479525 C1orf64Q8NEQ6 169 aa7.91□□□□□ -1.14
ECHDC1-216ENST00000479525 LCA10Q71F78 164 aa7.9□□□□□ -1.14
ECHDC1-216ENST00000479525 MT1BP07438 61 aa7.86□□□□□ -1.15
ECHDC1-216ENST00000479525 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
ECHDC1-216ENST00000479525 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
ECHDC1-216ENST00000479525 A0A087WVE0 104 aa7.8□□□□□ -1.16
ECHDC1-216ENST00000479525 A6NN06 94 aa7.8□□□□□ -1.16
ECHDC1-216ENST00000479525 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
ECHDC1-216ENST00000479525 Q5VV11 94 aa7.79□□□□□ -1.16
ECHDC1-216ENST00000479525 KRTAP4-12Q9BQ66 201 aa7.77□□□□□ -1.17
ECHDC1-216ENST00000479525 SPRR2GQ9BYE4 73 aa7.75□□□□□ -1.17
ECHDC1-216ENST00000479525 ACYP1P07311 99 aa7.74□□□□□ -1.17
ECHDC1-216ENST00000479525 KRTAP19-8Q3LI54 63 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms